Propithecus coquereli (Coquerel's sifaka): 105815485
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Entry
105815485 CDS
T08746
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoq04131
]
105815485 (VPS13A)
Membrane trafficking [BR:
pcoq04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105815485 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_C
DUF5764
RRM_fung
Motif
Other DBs
NCBI-GeneID:
105815485
NCBI-ProteinID:
XP_012506109
Ensembl:
ENSPCOG00000023693
LinkDB
All DBs
Position
Unknown
AA seq
3024 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVADLDTSQLSLGIWKGAVALKNLQIKENALVGFVCNLNLVIP
WKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEEAKQKVVDQEQ
DRQEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLSIQTTDQY
WVPCLHDETEKLVRKLIRLDNLFAYWNVKSQMFYLNDYDESLNDLRNGIVKEHIVPEGYD
FVFRPISAKAKLQMNRRSDFDFSTPKINLEVELHNIAIEFNKPQYFSVMELLESIDMMTQ
NLPYRKFKPDVPLQYHAREWWAYAIHGILEVNVCPTLRMWSWKHIHEHRQKVKKYKELYK
KKLTSKKPSGDILMSLEELEKTLDVFNITIARQQAEVEVKKAGLRIYKEGVKDPEDNKGW
FGWLWSWSEKNTKEQPDVKLGTLEEMLTPEEKALLYEAIGYSETAVDPTLPKTFEAMKFF
VHLKSMSIVLREEHEKPELLDIVIEEFSTLMVQRPGAQAIKFETKIDSFHITGLPDNSKK
PHLLSSLDDAISLFQITFEINPLDETADQRCIIEAEPLEMIYDARTVNSIIEFFRPPKDV
HLAQLTSVTLTKLEEFRDKTATAETNLVASKSRSELPDVKQGGANLEEIMHRAYDSFDIQ
LTSIQLLYSRVGDNWKEARKLNVSTQHILVPMHFNVELSKAMVFMDLRMPKFKIFGKLPL
ISLRISDKKLQGIMELVESIPKPEPVTEVSAPVKPLQIQTSTSLGTSQISQKIIPLLELP
SVSEDESEEEFFDAPCSPLDEPLQFPTKVKSSRHRKLQKQDCSVNLTTFKIRFEVPEVLI
QFYHLVGDCELPVVEIDVLGLGTEIEIRTYDLKAYAFLKEFCLKCPEYLDENKKPVYLVT
TLDNTMEDLLTLEYVKVKNRETDIYXPITKIIFVLXVNFSSLDIHLHTEALLNTINYLNN
ILPQSEEKSASVNIIETEDKGDVIKKLAFKLSTNEDIITLQILAELSCLQIFIQDQKRKI
SEIKIEGLDSEIIMKPSVTEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMVSYVD
ATANSAYTDVNVVDIQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQAFAEATVQAAGM
AASGVKELAQRSSRMALDVNIKAPVVVIPQSPVSENVFVVDFGLITMTNTFHIVTESQSN
PPPIIDLITIKLSEMRLYRSVFINDTYQEVLDLLLPLNLEVIVERNLCWEWYQEIPCFNV
NAQLKPMEFILSQEDITTIFKTLYGNIWYEEGGSASPAVIKDQSTVTSGVTNASHHSGGA
TVVTAAVVEVHSRASQVKTTLNMSFRTEYLTMVLYSPGPEQASFTDVRDPSLKLAEFKLE
NIISTAKMYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVR
DGCVTDAVFQEMYICASVEFLLTVANVFLEAYTAGTAVETSVQTWTSKEEVPIQESDKWE
MNIIIKNPEIVFVADMTRNDTPALVITTQCEICYKGDLENSTMTAAIKDLQVRACPFLPV
KRKGKITTVSXLFNYLLDCKLFWIXYQMTTRGSSHMVCIDFLLVXFFSSKVSPVIINTMI
TITSALYTTKETIPKETASSTEHLWEKKDTKNLKMWFLEESNETENMAPATELVPKGEMI
KMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVW
EPLLEPLEIDQTEDFRPWNLGIKVKKKAKKAIVESDTEEENYKVPEYKTLISFYSKDQLN
ITLSKCGLVMLNNLAKAFTEAATGSSPVFIRDLAPFMILNSLGLTISISPSDSFSVLSVP
MAKSYVLKNDESLSMDYVRTKDNDHFSAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRR
LYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGNTLLGTASPEN
EFNIPLPSYRSFLFLKPEDRDYQMSEGIDFEEIIKNDGALLKKKCRSVNPSKKSFLINIV
PEKDNLTSLSVYSEDGWDLPYIIHLWPPILLRNLLPYKIAYYTEGIDNSVFTLNEGHSAQ
ICTVQLDKARLHLKLLDYLNHDWKSEYYIKPNQQDISFINFTCVTEIEKTDLDIAIHVTY
NTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPDYEKPVLFSFQPNHFFNNNKVQLM
VTDSELSDQFSIDTCIPFWPKDASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNKLGG
IIAEVNLAEHSTVITFSDYHDGAATFLLINHTRNDLVQYKQSSDMMTPIDLGKKTIYLVS
FFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIALALQDVGISLVNNYTKQEVAYIGFT
SSDVVWETKPKKKARWKPMSIKHTEKLEKAFKEYTESSPAEDKVIELDTNIPVRLTPTGN
NMKILQPHIIAIRRNYLPALKVEYSTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPIKP
PKSITMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFVYALADLMTEA
EVTEKTEVELFHKDIEAFKEEYKTVSLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAK
DSKQDEGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSK
QAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALV
GGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSG
FVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATET
SEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMIT
RRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVKSVFHAREFGKIIN
FRTPEDARWILTKLEEAREPSPSL
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgagtcggtggtcgtggacgtgttgaaccggttcttgggagactatgtggcg
gacctggacacgtcccagctctctctgggcatctggaaaggagctgtggccctcaagaat
cttcaaattaaagaaaatgccctggtaggttttgtctgtaatcttaaccttgtaattcca
tggaaaaacctttatacccaaccagttgaagctgtattggaagaaatttatttgctcata
gtgccttcttctagaataaaatatgatcctttaaaagaagaaaaacaactcatggaagca
aagcaacaggaactaaaaagaatagaagaagcaaagcaaaaagtagttgatcaagaacaa
gatcggcaagagaaacaggacacttttgcagaaaaattagttactcagatcataaaaaat
cttcaagtgaaaatttccagcattcatattcgttatgaagatgatatcactaatcgagac
aaaccgctgtcatttggtatttcccttcaaaatctcagcattcagacaactgatcagtac
tgggttccatgtttacatgatgaaactgagaaactagttcgtaagttaatccgattggat
aacctttttgcctattggaatgtgaagtctcagatgttttatcttaatgattatgatgaa
tcattgaatgacttgaggaatggcattgtcaaagaacatatagttccagaaggttatgat
tttgtatttcgccccatatctgctaaggccaaactacagatgaatcgccgatcagatttt
gatttttctacccccaaaataaacttggaagttgaattacataacatagcaattgaattt
aataaaccacagtattttagtgttatggagcttcttgagtcaattgatatgatgacacaa
aatttgccatacaggaaattcaaacctgatgtacctcttcagtaccatgccagggaatgg
tgggcttatgctatacatggtattcttgaagtaaatgtttgccccaccttacggatgtgg
tcatggaagcatattcatgaacataggcaaaaagtgaagaaatataaagaactgtataaa
aaaaaattaacaagtaagaagccatctggtgacattctcatgtctttggaggagttggaa
aaaacactggatgtctttaatataactatagctagacagcaggcagaagttgaggtaaag
aaagctggactcaggatttataaagaaggggtaaaagatccagaggataataaaggatgg
tttggttggctgtggtcttggtcagaaaaaaatactaaggaacaaccagatgttaaactt
ggaactcttgaagaaatgttgacacctgaagaaaaagctttactctatgaagcaattggc
tatagtgaaacagcagttgatccaaccttgcccaaaacatttgaagccatgaagtttttt
gttcacttgaaaagtatgtctattgttctaagagaagagcatgaaaaacctgagctgtta
gatattgtaatagaagaatttagcactttgatggtacaaagaccaggagcacaagcaata
aaatttgaaaccaaaatagattcatttcatattactggcttaccagataattcaaaaaaa
ccccatctcctttcttcattggatgatgctatttcactcttccaaattacatttgagata
aatccattagatgaaactgccgatcaaaggtgtatcatagaagctgaacctttagaaatg
atatatgatgcaaggacagtgaatagtataatagaattcttcagacctccaaaagatgta
catctagcacaactcacttcagtgactttgacaaaacttgaggaatttcgtgataagaca
gccacagcagaaactaatttggtggcaagtaaaagtcgttcagaattaccggatgtgaaa
caaggtggagctaatcttgaagaaataatgcatagagcttatgattcctttgatattcag
cttacaagtatacagctgctttacagcagagttggtgataattggaaagaagcacggaaa
ctcaatgtatctacacaacatattttggtacccatgcacttcaatgtggaactctctaag
gctatggttttcatggacttaaggatgcccaaattcaagatttttggaaagttacctctt
atttctttacggatctcggataaaaaactacaaggcattatggaattggttgaaagcatt
ccaaaacctgaacctgtaactgaagtatctgcccctgtcaaaccattgcagattcaaaca
tctacttctttgggaacatcacagatttcacagaaaataattcctctcttggaacttcct
tctgtttctgaagatgagtcagaggaggaattttttgatgcaccatgtagtcccttggat
gagcctcttcaatttccaactaaagttaaaagtagtcgacacagaaagttacaaaagcag
gattgttcagtaaatttgactacattcaaaatacgatttgaagtaccagaggttttgatt
caattttatcaccttgttggagactgtgaactgcctgtggtagaaattgatgttttagga
ttgggtacagaaattgagattagaacatatgatttgaaagcatatgcctttttgaaagag
ttctgcttaaaatgcccagagtacttggatgaaaacaagaaacccgtttatttggtcaca
acactggataacacaatggaagatctgttaacactggaatatgtgaaggtaaagaacaga
gaaacagatatttattgacctattactaaaatcatctttgttctttaggtgaatttttcc
tctttggatattcatttacacactgaagcacttctgaatacaataaattaccttaataat
atccttccacaatcagaggaaaaatcagcctcagtgaatattatagagactgaagacaaa
ggagatgtcattaaaaaactagcttttaaattatccacaaatgaagatattattaccttg
cagattttagcagaattatcgtgtttacagatctttattcaagatcagaaacgtaaaatt
tctgaaattaagattgaaggacttgattctgaaataattatgaaaccttcagtaactgaa
ataaatgcaaagctaaggaatataattgttttggattctgataaaacagctgtatacaaa
aaggctgtttatatcactggaaaagaagttttcagctttaaaatggtttcttacgtggat
gcaactgctaattctgcatacacagatgtgaatgtagttgacattcaggttaatttaaca
gttggttgcattgaagtagtttttgtcacaaaatttctatattctatattggcttttata
gataattttcaagcagctaaacaagcctttgctgaggcaactgttcaggcggctggaatg
gctgctagtggtgtaaaagaactggcacaaaggagttccagaatggcattggatgttaat
atcaaagccccagttgtggtcatcccacagtctccagtttctgaaaatgtttttgttgtt
gattttggactaattacaatgacaaatacattccatatagtaacagagagccaaagcaat
cccccacctattattgatttgataacaataaagctgagtgaaatgcgactatacagatct
gtatttattaatgatacataccaggaagtactggatctattactgccattaaatcttgaa
gtcattgttgagcgaaatttatgctgggagtggtatcaggaaattccttgttttaatgta
aacgctcagctaaaaccgatggagttcattctcagtcaagaagatataacaactatcttt
aaaacattatatggcaatatatggtatgaagaaggtggtagtgcctcacctgctgtcata
aaagaccaaagtactgttactagtggagttactaatgcttcacaccattcaggaggggcc
actgtggtgacagctgctgtggtagaagtacattcacgtgcctcacaagttaaaacaaca
ctaaatatgagtttcagaactgagtatctcaccatggtactgtatagtccaggtcctgaa
caggcttcgtttacagatgttcgtgatccttctctgaaacttgctgaatttaaattggaa
aatattataagtactgcaaaaatgtatacagatgactcaacattttcttccttctcatta
aaaaactgtattttagatgataaaaggcctcatgtcaagaaagcaactcctagaatgata
ggattgacagttgggtttgataaaaaagacatgatggatgtaaagtacaggagagtcaga
gatggttgtgtgactgatgcagtctttcaggaaatgtatatttgtgcaagtgtggaattt
ctgctgacggttgcaaatgtctttttggaggcctacacggcaggcactgctgtagaaacc
agtgttcaaacatggacctctaaggaagaagtacctatacaggaatcagataagtgggaa
atgaatattattattaaaaatcctgaaattgtgtttgtggctgacatgacaagaaatgat
actcctgccttagtcattacaacacagtgtgaaatttgctataaaggtgaccttgaaaac
agtacaatgactgctgccattaaagatctccaagtgagagcatgcccatttcttccagtc
aagagaaaaggcaaaatcactactgtgagttaactgtttaattatctgcttgattgtaaa
ctattttggatttaataccagatgacaactagaggttcttcccacatggtatgtatagat
tttttattagtttaatttttttcctctaaggtttcaccagttattataaataccatgatt
accataacttcagcgctttatacaactaaggaaaccatcccaaaagaaactgcttcttct
acagaacatttatgggaaaagaaggacacaaagaatctaaaaatgtggttccttgaagaa
tcaaatgaaactgaaaacatggctcctgcaactgaattggtacccaaaggagagatgata
aaaatgaacattgattctatttttatagttcttgaggctggaattggtcatagaacagtg
cctatgcttttggcaaagtcacgtttttcaggggaaggcaaaaactggagttccttaata
aatctccactgtcagcttgagctagaagtgcattattataacgaaatgtttggtgtatgg
gagcctttgcttgaacccctagaaattgatcagactgaggattttagaccatggaatctt
ggaatcaaggtgaaaaagaaagcaaaaaaggccattgttgagtcagacactgaagaagaa
aactacaaagtgccagaatataaaactctcatcagtttctattcaaaagaccaattaaac
attacattatccaaatgtggtcttgtaatgttaaataatttagccaaggcatttacagaa
gctgccactggatcttcacctgtcttcataagggatctagcaccgtttatgattttaaat
tctcttggacttactatttctatttcaccaagtgattcttttagtgtactcagcgttcct
atggcaaaatcatatgtattgaaaaatgatgagagtttaagtatggattatgtacgaact
aaagacaatgatcacttcagtgcaatgactagcctaagcagcaaactcttcttcattctt
ctcacacctgttaatcactctactgctgataagattcctttaacaaaagtgggacgacgt
ctgtacactgtaaggcacagagaatctggagttgaaagatctattgtttgtcaaattgat
acagtggaaggaagtaagaaggtaacaattcgctccccagtacagattagaaatcatttt
tcagtcccactctctgtttatgaagggaataccttgttgggaactgcttcacctgaaaat
gaattcaacataccattaccatcttaccgatcattcctttttctgaagccagaagacagg
gactatcaaatgagtgaaggaattgactttgaagaaattataaaaaatgacggagctctt
ctaaagaagaaatgtcgatctgtaaacccttctaagaaatcatttctcattaatattgtc
ccagaaaaagataatttaacatctctgtcagtgtattcagaagatggttgggacttacca
tacataatacatttatggccacctatcctactcagaaatcttcttccttacaaaattgct
tattatacagagggaattgacaattccgtttttactctaaatgaaggacattcagcccag
atttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaac
cacgattggaaaagtgaatattatataaaacctaatcaacaagacattagtttcatcaat
tttacctgtgttacagaaatagaaaagactgatttagatatcgctatccatgtgacttac
aatactggtcagacagttgtggcgtttcatagtccctattggatggtcaataaaactggt
cgaatgttacaatacaaagcagatggaatccatcgaaagcatccacctgattatgaaaag
ccggttctattttcttttcagccaaatcacttttttaataacaataaggtacagcttatg
gtaactgatagtgagttgtcagatcaattttcaattgatacttgtatccccttttggcct
aaggatgcttctagtaaacttcttattcaagttgaaaggagtgaggatcctcccaaaagg
atatattttaacaagcaagaaaattgtattttattgcgtctggataataagcttggaggt
attatagcagaagttaatttggctgagcattctacagttattacattttcagattatcat
gatggagcagctacattcttgttaataaatcacacaaggaatgatcttgttcagtacaag
caaagctctgatatgatgacacctatagatttggggaaaaaaacaatttatttagtctca
ttctttgaaggcttacagcgcattattttattcactgaagatccaagggtatttaaagta
acatatgaaagtgagaaagcagagttagcagagcaagaaattgcattggcattacaagac
gttggaatttctcttgtcaacaattacacaaagcaagaagtagcctatataggctttaca
agttctgatgtggtttgggagacaaagcccaagaagaaggccagatggaagccaatgagt
ataaagcacactgagaagttagagaaagcatttaaggaatatactgaatcttcacctgca
gaagataaggttattgagttggacactaacattccggttcgcttaacacctactggtaat
aacatgaaaattctgcaaccacatataatagctatacgaagaaattatcttccagcatta
aaggtggaatacagcacatctgcacatcagtcatcatttagaattcaaatttacagaata
cagatccaaaatcagatacatggtgctgtgtttccatttgtgttttatcctattaaacct
ccaaagtcaatcaccatggattcagcaccaaagccctttacagatgtcagtattgtcatg
agatctgcaggacattcccagatatcacgtattaagtatttcaaagtgttgattcaagaa
atggatttaagattagatcttgggtttgtctatgctttagcagaccttatgacagaagcc
gaggtgactgaaaaaactgaggttgaactttttcataaagatatagaagctttcaaagaa
gaatataaaacagtttcattagtagatcaatcacaagtcagtctctatgaatattttcat
atatctcctatcaagttgcatttaagtgtttcactgagttcgggcagagaagaagctaaa
gattcaaaacaggatgaaggactgattccagttcattctttaaaccttttgctgaagagt
attggtgccactcttacagatgtacaagatgtagtttttaagcttgcattttttgaactc
aactatcagttccatacaacatccgaactacagtctgaagtaataagacactattcaaaa
caggctattaaacagatgtatgtactcattctcggacttgatgttttgggaaatcccttt
ggcttaattagagaattttctgaaggcgtagaagcatttttttatgaaccttaccaggga
gccatccagggtcctgaagagtttgtggagggaatggcactaggacttaaggcactagtt
ggtggagctgttggtggattagctggtgctgcctccaaaatcaccggtgctatggctaaa
ggggtagcagctatgactatggatgaagactaccaacagaagagaagagaagccatgaat
aaacagccagctggttttagagaaggcatcactcgtggaggaaaaggcttagtttctggt
tttgtaagcggcataacaggaattgttacaaaaccaatcaaaggggctcaaaaagaagga
gcagctggtttctttaaaggtgttgggaaaggtttagttggagcagtagcaaggccaact
ggaggcatcatagacatggctagtagtacatttcaaggaataaaaagagctacagagact
tctgaagtagagagtttgcgacctcctcggttctttaatgaagatggggttatcagacct
tacaggttgagggatggtactggaaatcaaatgttacaggtcatggaaaatggaagattt
gcaaaatacaaatattttacccatgtcatgatcaataaaacagatatgttaatgataacc
agacgtggtgtattgtttgtaacaaagggaacattcggacaacttacatgtgagtggcag
tatagttttgacgaatttaccaaggagccattcattgttcatgggagaagattacgcatt
gaagcaaaggaacgggtgaagtctgtattccatgccagagagtttggaaaaataattaac
ttcaggaccccagaggatgctaggtggatcctcacaaagctagaagaagcaagagaacct
tctccaagcctctga
DBGET
integrated database retrieval system
