Propithecus coquereli (Coquerel's sifaka): 105815965
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Entry
105815965 CDS
T08746
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoq04040
]
105815965 (SCN11A)
Ion channels [BR:
pcoq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105815965 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
FAM131
Motif
Other DBs
NCBI-GeneID:
105815965
NCBI-ProteinID:
XP_012506737
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTSDSLAAIEKRIAIQKDKKKSGEHTEAEPQPRPQLDLKASR
KLPKLYGDIPHELIGKPLEDLDPFYRNHKTFMVLNKTRTIYRFSAKRALFIFGPFNSIRS
LAIIISVHSLFSMFIICTVTINCVFMAARLGNYSNTDPPELVFTGIYIFEALVKILARGF
ILDEFSFLRDPWNWLDSIVIGTAVVSYLPQFSFSMSSLRTFRVFRALKAISVVSGLKVIV
GALLRSVKKLVNVMILTLFCLSIFALVGQQLFMGGLNQKCIRKDCETISNLEANDHCFER
KENSTELRMCGTWMRNNACSEEFQCNHTRINPDYGYTNFDNFGWSFLAMFRLMTQDSWEK
LYQQTLRTCGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMFQE
AQKLLKEEKEALVAMGIDRSSLTSLETSSFSPKKRKFFSYKKRKSLFFRESRKNQPPGSD
SDEDSPKKSHLLQQTKRLSQNLSVDHFDEHGDPFQRQRALSAVSILTITMHEQEKSQEPC
LPCGKNLASKYLVWDCSPQWLCIKKVLKTVMTDPFTELAITICIIINTVFLAMEHHEMKQ
DFESMLNTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVAVLSFADVMNGLSGK
QKWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQLF
GSKFKSLKSTKFCDTRVSCLRRWHMEDFYHSFLVVFRILCGEWIENMWECMQEAEIPLCV
IVFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGEARKTKVQLALLRFHRAFCFVMH
TLEHFCLKWCRRQSLPKQEVTGGPAAESKDIIPLVTEMKRGPETQEAFGVLNFTPKTLGI
GHDRTWLAPLAEEEDDVESPDEENAQPITQPEAERQAYELHQETKKPTSPGVQSVEIDVF
SVDDTCLAIQNPRKKSDATSILSECSTIDLQGTFGRLPEMVPKKEPERCFPKGVGCCFLC
CSMDKRKSPCITWWNLRKTCYQIVNHSWFESFIIFVILLSSGALVFEDVHLNNQPKIQEL
LNYTDNIFTYIFILEMGLKWVAFGFTKYFTSAWCWLDFIIVIVSVPSLIKLNGLKYFRTL
RALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCIN
GTDMNSRIVSDYIDYNVIANRTQCIENRSFSWYNVEVNFDNVGNAYLALLQVATFKGWMD
IMYAAVDSRGKEQQPGFEENSYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTNQVFDIVIISLIILNMI
SMMAESDNQPENMKFILERLNLAFVVIFTTECLIKIFALRQYYFTNGWNLFDCVVVVLSI
VSK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtgatcttcccggatgcccgaaatttccgccccttcact
tctgattctctggctgcaattgagaagcggatagccatccaaaaggacaaaaagaagtct
ggagagcatacagaggcagaaccccagcctcggcctcagcttgacctaaaggcctctagg
aagttgcccaagctctacggcgacattccccatgagctaataggaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaacaaaacgagaacaatc
taccgcttcagtgccaagcgcgccttgttcatttttgggcctttcaattcaatccgaagt
ttagccattataatctctgtccattcattgttcagcatgttcatcatctgcacagttacc
attaactgcgtgttcatggccgcaaggcttggcaactacagtaacacagatcctcctgag
cttgtcttcactgggatttatatttttgaagctttggtaaaaatattggcaagaggcttt
attctggatgaattttctttccttcgagatccatggaactggctggactccattgtcatt
ggaacagcggttgtatcatatttgccacagttcagcttcagcatgtcgtcactgcgtacc
ttccgagtgttcagagctctgaaagccatttcagtagtttcaggtctgaaggtcatcgtg
ggggccttgctgcgctctgtgaagaaactcgtcaacgtgatgatcctgaccctcttttgc
ctcagcatctttgccctggtaggtcagcagctcttcatgggaggtctgaaccagaaatgt
atcaggaaggactgtgagactatcagcaaccttgaagctaatgatcattgttttgaaagg
aaggaaaattccactgaactcagaatgtgtggcacctggatgcgtaacaatgcctgttct
gaagagtttcaatgcaatcacaccagaattaatcctgactatggttatacgaactttgac
aactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggagaag
ctttaccaacagaccctgcgcacctgtgggctctactcagtcttcttttttgtggtggtc
atcttcctgggctccttctacctgattaacttaaccctggccgttgtcaccatggcttat
gaggagcagaacagaaacgtagctgcagagacggaggccaaggaaaagatgtttcaggaa
gcccagaagctgctaaaggaggagaaggaggctctggttgccatgggaattgacagaagt
tcacttacttcccttgaaacatcatccttttctcccaaaaagagaaagttctttagttat
aagaaaaggaagtccctctttttcagagagtctaggaaaaatcagcctccaggatcagat
tctgatgaagattcccccaaaaagtcacacctcctacagcaaaccaaacgactgtcccag
aatctgtcagtggaccactttgatgagcatggagaccccttccaaaggcagagggcattg
agtgctgtcagcatcctcaccatcaccatgcacgaacaagaaaaatcacaggaaccttgt
ctcccatgtgggaaaaatttggcatccaaataccttgtgtgggactgtagcccccagtgg
ctatgcattaagaaggtcctgaaaactgtgatgactgacccctttaccgagctggccatc
accatctgcatcataatcaacactgtctttttggccatggagcatcatgaaatgaagcaa
gattttgagtctatgttgaatacagggaatttggttttcactggcattttcatagcagaa
atgtgcctaaaaatcattgcactcgatccctaccactactttcgccgaggctggaacatt
tttgacagcattgttgctgttctgagttttgcagatgtgatgaacggtctctctggaaaa
caaaaatggccattcttgcgttccttcagagtgctgagggtcttcaagttagccaaatcc
tggccaactttaaacacactaataaagataattggccactccgttggagcgcttggaaac
ctgactgtggtcctagccattgtggtctttattttctcagtagttggcatgcagcttttt
ggctctaaattcaagtccctaaagagtactaaattctgcgacactcgggtctcctgttta
cggcgctggcacatggaggatttttaccactccttcctggtggtattccgcatcctctgt
ggggaatggatcgaaaacatgtgggaatgtatgcaagaagctgaaataccattgtgcgtt
attgtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctcttcattgcc
ttattgctcaattcctttagcaacgaggagagagatggaaacttagaaggagaagccagg
aaaactaaagtccagttagccctgcttcggttccaccgggctttttgttttgtaatgcac
actcttgagcatttctgtctaaagtggtgcaggaggcaaagcttaccaaagcaagaagtg
acaggaggtcctgctgcagagagcaaagacattattcccctggtcacagagatgaaaagg
ggaccagagacccaggaggcatttggtgtactaaactttacaccaaagaccttgggcatt
gggcatgatcggacttggctggccccacttgcagaggaagaagatgatgtcgaatctcct
gatgaagaaaatgcacagcccatcacacaacctgaggctgaaagacaggcctatgaactc
catcaggagaccaagaagcccaccagcccaggagttcaaagtgtggaaattgacgtgttc
tctgtagatgatacttgtctggctatacagaatccccgaaagaagtctgatgctaccagt
atactctcagaatgtagcaccattgatctacagggtacatttggacggttacctgaaatg
gttcccaaaaaggaaccagagagatgttttcccaaaggcgtgggttgctgctttctgtgt
tgtagcatggacaagagaaagtccccctgcatcacttggtggaacctgcggaaaacctgc
taccaaattgtgaatcacagttggtttgagagctttattatctttgtgattctgctgagc
agtggggcactggtatttgaagatgttcaccttaataatcaacccaaaatccaagaacta
ctaaattatactgacaatattttcacatatatttttatcctggaaatgggtctgaaatgg
gtggcctttggatttacaaagtatttcaccagtgcctggtgctggctcgacttcatcatt
gtgattgtctccgtgcccagtctcattaagttaaatggcttgaagtacttccggactcta
cgagcactaaggcctcttcgagcactgtcccagtttgaaggaatgaaggtggtggtcaat
gctcttataggtgccatacctgccattttgaatgttttacttgtctgcctcattttctgg
ctcatattttgtattctgggagtaaacttcttttctggaaaatttggaagatgtatcaat
ggaacagatatgaactcacgtattgtatctgattatattgattataacgtcattgccaac
cgaactcaatgtattgagaacaggagtttctcctggtacaacgtggaagtcaactttgac
aatgtggggaacgcttacctggctctgttgcaggtggcaacatttaaaggctggatggat
atcatgtatgcagctgttgattccagagggaaagaacaacagccagggtttgaggagaac
tcatacatgtacctttactttgtggtttttatcatctttggctcgttcttcactctgaat
ctctttattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggccaa
gacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaaacccattccaaggcctctgaacaaatgtcaaggtctcgtctttgac
ctagtaacaaaccaggtctttgacatcgtcatcataagtctcattatcctaaacatgatt
agcatgatggctgaatcagataaccaacctgaaaacatgaaattcatccttgagcgtctc
aacctggcctttgtggtcatctttacaacagagtgtctcatcaaaatctttgctttgagg
caatactacttcaccaatggctggaatttatttgattgtgtggtcgtggttctttctatt
gttagtaagtaa
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