Propithecus coquereli (Coquerel's sifaka): 105816005
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Entry
105816005 CDS
T08746
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105816005 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105816005 (DDX46)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105816005 (DDX46)
Spliceosome [BR:
pcoq03041
]
Complex A
U2 snRNP components
U2 related factors
105816005 (DDX46)
Complex B
105816005 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
FAM176
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105816005
NCBI-ProteinID:
XP_012506757
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQ
VVSLLLNLPAGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYE
DYVHRAGRTGRAGNKEGKIIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDE
DAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAPTAGNAEKLEIAKRLALRINAQKNLGI
ESQVDVMQQATNAILRGGTILAPTVSAKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQN
ESFKRYEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKI
YLAIESANELAVQKAKAEITRLIKEELIRLWRIP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagggtattacagtcaaaggaaaaggttgtcccaaaccaattaaatcttgggtccag
tgtggaatttcgatgaagatcttgaattcgctaaaaaagcatgggtatgaaaagcccaca
ccaatccaaacccaagcaattcctgccataatgtctggacgagatttgattggcattgct
aagactggaagtggaaagaccattgcttttttgttgcccatgtttagacatatcatggat
cagaggtcattagaagaaggagaggggccaatagctgtcatcatgactccaactcgagaa
ctagctttacaaattactaaagaatgtaagaagttttcaaagaccttgggacttagagtg
gtctgtgtttatggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgct
gaaattattgtttgcacacctggtcgaatgattgatatgttagcagctaacagtggccgg
gtcacgaatcttcgaagagtaacgtatgttgttctagatgaagcagacagaatgtttgac
atgggttttgaaccacaggtcatgcgcattgtggataatgtccgtcctgatcgtcagaca
gttatgttttcagctactttccccagagctatggaggctttggctcgcagaatcctgagc
aaacccattgaagtgcaggttggagggaggagtgtggtttgctcagatgtggagcaacaa
gtggtaagtcttctccttaatttacctgcaggcattgatcaatatgacagagatagcatc
ataaatgactttaaaaatgggacctgcaaacttcttgtggccacctctgtcgctgcccga
ggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaatcattatgag
gattatgtgcacagagcaggacggactggaagagcgggcaacaaggaggggaaaataatt
aaaaagagtagtgggttctctggtaagggattcaagtttgatgaaacagagcaagctttg
gctaatgagaggaagaagttacaaaaagcggctcttggtctacaagattcagatgatgaa
gatgctgcagtcgatattgatgagcaaattgaaagcatgtttaattcaaagaagagagta
aaggatatggctgctcctggaacatcaagtgtccctgctccaactgcaggaaatgctgag
aaattagaaattgctaagagattggctcttaggatcaatgctcagaagaatttaggcatt
gaatctcaggtagatgtgatgcaacaggccaccaacgccattctcagaggtggcaccatt
ctggctcccaccgtgtctgcaaaaaccatcgcagagcagcttgccgaaaagatcaatgcc
aagctcaattatgtgcctttagagaagcaagaagaagagagacaggatggtggacagaat
gaatcttttaagagatatgaggaagaattagagatcaatgatttcccacagactgctagg
tggaaagttacttctaaggaagctctgcagagaatcagcgaatactctgaagctgcaatt
acaatcagaggaacatacttccctcctggcaaagaacccaaggaaggagagcggaaaatt
tacttggcaattgaaagtgccaatgaactggctgtgcagaaagcaaaggcagaaatcacc
aggctcataaaagaagaactgatccggctgtggagaatcccttaa
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