Propithecus coquereli (Coquerel's sifaka): 105817080
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Entry
105817080 CDS
T08746
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105817080 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoq04147
]
105817080 (COL18A1)
00535 Proteoglycans [BR:
pcoq00535
]
105817080 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pcoq00536
]
105817080 (COL18A1)
Exosome [BR:
pcoq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105817080 (COL18A1)
Proteoglycans [BR:
pcoq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105817080 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pcoq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105817080 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
105817080
NCBI-ProteinID:
XP_012508153
Ensembl:
ENSPCOG00000014698
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MAPDPSGRLGLLLLTCCLAAARAQLLGLDWLWSNKVTSPAPTLASEPQGRLPVQLTTHAA
TRDGPTERGAVPASPEPPPEVLEGGRAGPPDAPATATAAAVSPNAREENIAGVGAKILNV
AQGIRSFVRLWDDATPTESTAGVQTAAPEAPLDSPTHAGASSAPREDRTALWPLSGAPWA
PGAHTTGAATLPTPTLAATSRGRPQAPLREPSVPPRSPESAGEEVGLLQLLGEPPPQHVT
QIDDPEVGLAYAFGPGANSGQVARYHVPSPFFRDFSLLFHVRPATEDAGVLFAVTDAAQA
VVLLGVKLSEVRDGHQHITLLYTEPGAGQTHTAASFRLPALVGQWTRFALSVDGGSVALY
VDCEEFQRMAFTRSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELRVRGDPRVSARHCL
DEEDDDSDAASGDFGSGLAENRELPREDTGAAPKPSLPRPPPVTSPPLAGGGSTEGSRTE
ETEDTTAAPLGAHTLPGSGPVSTRDESVWGPAASPKEGGLKGQKGEPGAPGLPGSIGPPG
PPCVIGPPGPPCPFSPESPQGPVGPAAQSPHTQPVSGPRGPPGLPGKDGAPGRDGRPGDA
GEDGKPGDTGPQGFPGTPGDVGPKGEKGDPGVGTRGPPGPQGPPGPPGPAFRHDRLTFID
MEGSGFGGDLETLRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPPGLPGVPGRDGP
PGFPGPPGPPGAPGREGPPGRTGQKGGLGEAGAPGPKGSTGDPGPVGAPGQSGLAGAPGP
AGPPGPPGPPGPPGPGFAAGFDDMEGSGAPFWSTGRGSDGPQGRPGLPGLKGDPGTPGPP
GAKGEVGADGAPGFPGLPGREGAVGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPG
PVVYVSEQDGAVLSAPGPEGRPGYAGFPGPAGPKGDLGSKGERGFPGPKGDKGEPGSIFS
PDGRAAAPAPKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGEAS
VAFGTRGMPGPPGPPGPPGPPGTPVYDSNAFVESGRPGPPGLPGERPAPGPRGMPGPPGP
PGPPGQFPFDLLNLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSVPGPPGPPGPPGYP
GIPGTKGESIRGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPG
PPGPPGPPGTTGASSGVRIWATYQALLDQVHEVPEGWLMFVAEREELYVRVRNGFRKVQL
EARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHSTARPWRADDILASPPRLPAPQP
YPGAPHHGSYVHLRPAHPTGPPAHTHQDFQPVLHLIALNSPLSGGMRGIRGADFQCFQQA
RAAGLAGTFRAFLSSRLQDLYSIVRRADRAAVPVVNLKDEVLFPSWEALFSGSQAQLKPG
ARIFSFDGKDVLRHPAWPQKSVWHGSDPSGRRLIESYCETWRTEAPEATGQASSLLAGRL
LGQQAASCRGAYAVLCIENSFVSGSQ
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggccgcctgggcctgctgctgctcacctgctgcctcgcggcc
gcccgggcccagctgctgggcctagactggctgtggtccaataaggtcaccagccctgcg
cccaccctggcctccgagccccagggccgccttcctgtgcagctcaccactcacgcggcc
acccgggatggccccacggagcgaggggcagtccccgccagccctgagccacccccggag
gtgctggagggtggccgggctgggccccctgacgcccccgccacggccaccgccgctgcc
gtgagccccaacgcgagggaagagaacatcgccggagtcggagccaagatcctgaacgtg
gcccagggcatccggagcttcgtccggctgtgggatgatgccacccccaccgagagcacg
gccggggtgcagacagcagcccccgaggcccccctggactcccccacccacgctggggcc
tccagcgccccccgggaggacaggacagcactctggccgctcagtggtgctccgtgggct
ccaggcgcccacacgaccggggctgccacactgcccacacccaccctggccgccacctcc
cggggcaggccccaggcaccactccgggagccctcagtgccaccacggtccccagagagc
gccggcgaggaggtggggctgctgcagctcctcggggagcccccaccccagcacgtcacc
cagatcgacgaccctgaggtcgggctggcctacgcattcgggccaggtgccaacagcggc
caggtggcccgctaccacgtccccagccccttcttccgagacttctcgctgctgttccac
gtccggccggccacggaggacgcgggggtgctgttcgccgtcacggacgcggcgcaggcc
gtggtcttgctgggcgtgaagctctcagaggtgcgggacggacaccagcacatcacgctg
ctctacacggagccgggcgcgggccagacccacacggccgccagcttccgcctgcccgcc
ctggtcggccagtggacccgctttgcgctcagcgtggatggcggctcggtggcgctctac
gtggactgtgaggagttccagaggatggcgttcacacgatcctcgcggggcctggagctg
gagcccggcgccggcctctttgtggcccaggccggaggggcggaccccgacaagttccag
gggatgatcgcggagctgagggtgcgcggggacccccgggtgagcgcccggcactgcctg
gacgaggaggatgatgactcggacgcggcatccggggacttcggcagtggcctcgcggag
aaccgggagctgcccagggaggacacaggcgcggcccccaaacccagcctcccccggcct
cccccggtaacgtcgccgcccttggctggaggcggcagcacggaaggttccagaacggaa
gaaactgaagacaccacagcagctccactaggagcgcacaccctgcctggctcaggtccg
gtttccacgagggacgagagcgtctggggccctgcggcctccccgaaggagggaggcctg
aaggggcagaagggggagccgggagctccgggcctgcctggctccatcggtccccccggc
cccccgtgcgtgatcggccccccggggcccccgtgcccgttcagccccgagagtccccag
ggtcccgtgggcccagcggcacagagcccacacacgcagcctgtctctgggccgcgggga
cccccggggctgccggggaaggatggcgccccaggaagggacggccggccgggcgacgcc
ggtgaagatggaaaacccggtgacactgggccacagggcttcccggggactccgggggac
gtgggccccaagggcgagaagggggatcctggggttgggacaagaggacccccgggaccc
caggggccgccaggaccgccaggacctgccttcagacacgacaggctgaccttcattgac
atggagggatccggctttggcggcgacctggagaccctccggggcccgcgaggcttcccc
gggccccccgggccccccggcgtcccaggcctgcccggtgagccaggccgctttggggtg
aacagctccgacgtcccaggacccccgggtcttcctggtgtgcctgggcgggacgggccc
cccggattcccgggccccccggggcccccgggtgctccaggtcgagaggggccgccagga
aggaccgggcagaaaggcggcctcggtgaagcgggcgccccaggacccaagggaagcacg
ggagaccctggtcccgttggcgctcccgggcagagcggcttggcaggagcacctgggcca
gctggaccgccaggaccccccggtccccctgggcccccaggaccaggatttgcggctggg
tttgacgacatggaaggctccggggctcccttctggtcgacgggccgaggctccgacgga
ccacagggacggcccggcctgccaggactcaagggggatcccggcacgcctgggccaccc
ggggccaagggagaagtcggagcggatggggcccctgggttccccggcctccccggcaga
gagggcgccgtggggccccagggaccgaaaggggacagaggcagccggggagaaaaaggc
gacccaggcaaggacggagtggggcagccgggcctccccgggccccccggaccgcccggg
cccgtggtctacgtgtcggagcaggacggagccgtgctgagtgcgccagggcccgagggc
aggccggggtacgcaggctttcccggacccgccgggcccaagggtgacctgggctccaag
ggtgagcgaggcttcccgggacccaagggtgacaagggagagcccggcagcatcttcagc
cccgacggcagagccgcggcccctgccccgaaaggagcgaagggagagccgggcttccga
ggacccccgggcccctacggacggccggggcacaagggggagattggctttcctggacgg
ccgggtcgtcccgggatgaacggactgaaaggagagaaaggggagccgggagaggccagc
gtggcattcggcacgaggggaatgcccggcccccccgggcctccgggacccccaggccct
cctgggacccctgtctacgacagcaacgcgtttgtggagtccggccgccctgggcctcca
ggactgccaggtgagcgcccggctccagggccacgaggaatgcccggcccccccgggcct
ccgggacccccaggacagttcccgttcgacctgctgaacttggaggccgaaatgaagggg
gagaaaggagaccgaggggacgccggacagaaaggggaaaggggcgagccggggggcggc
ggcttcttcggctccagtgttcccggcccccccggccccccaggcccaccgggctaccca
gggatcccgggcaccaaaggagagagtatccggggcccgcccggcccgcctggacctcag
ggaccccccggcatcggctacgaggggcgccagggcccccccggcccccccggcccgcca
gggcccccttcatttcccggcccccacaggcagaccatcagtgttcccggccccccaggg
ccccctgggccgccaggaccccctggaaccacgggtgcctcctcaggggtgaggatctgg
gccacgtaccaggccctgctggaccaggtgcacgaggtgcctgagggctggctcatgttc
gtggccgagcgggaggagctctacgtccgcgtccggaacgggttccgcaaggtccagctg
gaggcccggacgccactgccgcgggggacggacaatgaggtggccgccctgcagcccccc
gtggtgcagctgcacgacagcaacccgtacccccggcgggagcacccccactccaccgca
cggccctggcgggcagacgatatcctggccagccccccgcgcctgcctgccccccagccc
taccccggagcgccgcaccacggctcctacgtgcacctccggccggcgcaccccacgggc
ccacccgcccacacccaccaggatttccagccggtgcttcacctgatcgcgctcaacagc
ccgctgtcgggcggcatgcgcggcatccgcggggccgacttccagtgcttccagcaggcg
cgggccgcggggctggccggcaccttccgggccttcctgtcctcgcgcctgcaggacctc
tacagcatcgtgcgccgcgccgaccgcgcagccgtgcccgtcgtcaacctcaaggacgag
gtgctgtttcccagctgggaggccctgttctcgggctcccaagcccagctgaagcccggg
gcccgcatcttctccttcgacggcaaagatgtcctgagacacccggcctggccccagaag
agcgtgtggcacggctcggaccccagcgggcgccggctgatcgagagctactgtgagacg
tggcggacagaggcccccgaggccacgggccaggcctcctcgctgctggcgggcaggctg
ctgggccagcaggccgcgagctgccggggcgcctacgccgtgctctgcatcgagaacagc
ttcgtgagcggctcccagtag
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integrated database retrieval system
