Propithecus coquereli (Coquerel's sifaka): 105817392
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Entry
105817392 CDS
T08746
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105817392 (DDX1)
03016 Transfer RNA biogenesis [BR:
pcoq03016
]
105817392 (DDX1)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105817392 (DDX1)
Spliceosome [BR:
pcoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105817392 (DDX1)
Transfer RNA biogenesis [BR:
pcoq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105817392 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
105817392
NCBI-ProteinID:
XP_012508522
Ensembl:
ENSPCOG00000028185
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALAKAPDSYTVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRQEMWSEAIKILKGEY
AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQ
NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI
SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEVEEHLNCTISQVEPD
IKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL
FRTF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaggagatg
gattggcttctcccaactgatatccaggctgagtctatcccactgatcctaggaggaggt
gatgtactcatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtactcaacaaatggcaaatgaacccatatgacagaggatct
gcttttgcaattggatcagatggtctttgttgtcaaagcagagaggtaaaggaatggcat
ggatgtagagctactaaaggattaatgaaagggaaatactactacgaagtatcctgtcat
gaccaaggattatgcagagttgggtggtctactatgcaggcctccttggacctaggtact
gacaagtttggatttggcttcggtggaaccggaaagaaatctcataataaacagtttgat
aattacggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaaaaaccaagctctctttcctgcttgtgttttgaagaatgctgaactaaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggttttgttgctcttgccaag
gcacctgatagttataccgtcaaatcgcagcacacaggtaatgcacaggtgacacaaaca
aagtttctccccaatgctccaaaagctctcatcgttgaaccttcccgggagttagctgaa
caaactttgaataacatcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggaaaatggggta
gatatagtcgtaggcactccaggaagactggatgacttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctagatgaagctgatggtcttctttctcaaggttat
tccgattttataaataggatgcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgctctgccactttgcattcttttgatgtaaagaaactatctgag
aagataatgcattttcctacatgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtcccagtgaatcccaaaactgacagactctgggaaaggcttgga
aagaaccacattagacaagaaatgtggtctgaagctattaagatcctgaagggggagtat
gctgtccgggcaatcaaggaacacaagatggatcaagcaattatcttctgtagaaccaaa
attgactgtgataacttggagcagtattttatgcaacaaggaggaggacctgataagaaa
ggacaccagttctcatgtgtttgtcttcatggtgacaggaagcctcatgagagaaagcaa
aatttggaaagatttaagaagggagatgtaagattcttgatttgcacagatgtagccgct
agaggaattgatatccatggtgttccttatgttataaatgtcactctacctgatgaaaag
caaaactatgtacatcgaattggcagagtaggaagagctgaaagaatgggtctggccatt
tccctggtggcaacagaaaaagaaaaggtttggtaccatgtatgtagtagccgtggaaaa
gggtgttataacacaagactcaaggaagatggaggctgtaccatatggtacaatgagatg
cagttgctatctgaggtagaagaacacctgaactgtaccatttctcaagttgagccagat
ataaaggtaccagtggatgaatttgatggaaaagttacttatggtcaaaaaagggctgct
ggtggtggaaactataaaggccatgtggatattttggcacctactgttcaagagttggct
gcccttgaaaaggaggcccagacatctttcctgcatcttggctaccttcctaaccagctg
ttcagaacgttctga
DBGET
integrated database retrieval system
