Propithecus coquereli (Coquerel's sifaka): 105818016
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Entry
105818016 CDS
T08746
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03082
ATP-dependent chromatin remodeling
pcoq04714
Thermogenesis
pcoq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105818016 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105818016 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105818016 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoq03021
]
105818016 (SMARCD1)
03036 Chromosome and associated proteins [BR:
pcoq03036
]
105818016 (SMARCD1)
Transcription machinery [BR:
pcoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105818016 (SMARCD1)
Chromosome and associated proteins [BR:
pcoq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105818016 (SMARCD1)
PBAF complex
105818016 (SMARCD1)
GBAF(ncBAF) complex
105818016 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
105818016
NCBI-ProteinID:
XP_012509336
Ensembl:
ENSPCOG00000026807
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVWSKLSLHLLPSSTKGTLAFGLH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggctggtttccagtctgtggctccgagcggcggcgccggagcctctggt
ggagcgggcgcggcggctgcactgggcccgggcggaactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgccgggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcatatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatacgatgccaccaaacaaaagaggaagttctcttccttttttaagtccttg
gtgattgaactggacaaagacctatatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagactgatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgttctactgatgctggattaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagactcgtcccgtgatcatccaagcattgtgg
caatatattaagacacataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aaatacctccagcagatctttgagtctcagcgtatgaagttttcagagatccctcaacga
ctccatgccttgcttatgccaccggaacctatcatcattaatcatgtcatcagtgttgac
ccaaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggacgataccttg
aagacccagatgaattcttttctgctgtccactgccagccaacaggagattgctactctg
gacaacaagatccatgagacaatagaaactatcaaccagctgaagacccagcgggaattt
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
cgggacctcaagacaatgaccgacgtggtgggtaacccggaggaagagcgccgagctgag
ttctacttccagccttgggctcaggaggccgtgtgccgatacttctactccaaggtttgg
agcaaactctcccttcacttgttgccctctagcactaaaggaaccctggcttttgggctc
cactga
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integrated database retrieval system
