Propithecus coquereli (Coquerel's sifaka): 105818151
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Entry
105818151 CDS
T08746
Symbol
USHBP1
Name
(RefSeq) LOW QUALITY PROTEIN: Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoq03037
]
105818151 (USHBP1)
Cilium and associated proteins [BR:
pcoq03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105818151 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DASH_Dam1
FlaC_arch
Prefoldin_2
HALZ
Motif
Other DBs
NCBI-GeneID:
105818151
NCBI-ProteinID:
XP_012509510
Ensembl:
ENSPCOG00000028847
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MSAWATRPRSRRGRHATPGELDPVAESSEEAEAASGTSKPSPVLPPDSFGPELLGPMAGV
SDQGLGSRTDKETDGDSGRGPASASEGPHEPAVEAHQVPEAALQDRETVSSGTGTPDVFQ
TLQHALSSLEAAAAAWRHRPPSCPRLMEAEGRSEGVPGPLRKQEGAGGCQQEAACLAERN
AWLRLALGSRENELVRTQASLQAIRAEKETLQREVQELQDFLLRLEPFPPPSHSQAAGSG
SGSSSSGADGEPWGTQDSFSLADPLLRRLQSNSSTQILGSLPTQPLTPEMHIMETQMEQL
QGSIEKLKCFNRLLSAVLQGYKGRCEGLSMQLSQREAEATALRLALQYSEHCEEAYGALL
ALREADSGAGDLQAAEKEALRLLAQEEAAMDGGTLQGPQPSPEGSSVDKPTPQEVAIQLR
DYIQRLQERRALVKILPEPGSTLAPMPTVPRAEAIVQAILGTQPGPALPRLEKMQIQQDL
VDTRESLADLMLRLQLVRREKRGLELREAALXAQGPAHVLLLEQLRWERAQLRAGGPSGS
GGDSSGGGSSGDEEEWSQGPPVVPGGIGGIDGGQVGRVWDPDKLAQELAASLTRAVDLRE
QLQSLREKLEQVAQKGRARRAQGAELNSDLCRAHSALVLAFRGAHRKQEEQRRKLEQQMA
LMETQHAKELAVLEATAGALGKPRPPRLPPRLGETFL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctgggccacacggccccgaagccggcgagggaggcatgctacgccaggtgaa
ctggatcccgtggccgagagttcagaggaggctgaggcagccagtgggacctccaagccc
agccctgtgctgcctccagacagcttcggaccagagttgttgggccccatggcaggagtc
agtgaccagggcctagggagcaggactgacaaggagactgatggggactctggcagagga
ccggcctcagcctctgagggaccccatgagcctgcagtggaagcccaccaggtcccagag
gcagccctgcaggacagagagactgtctcctccgggactgggacccctgatgtgtttcag
accctccaacatgctctgagctccctggaggcggctgctgctgcctggcgccaccgaccc
ccaagctgtcctaggctgatggaggcagaggggagaagcgagggggtcccagggcccctc
aggaagcaggagggggcagggggctgccagcaggaggcagcttgcctggcggagaggaat
gcctggctccggctggccctgggcagccgcgagaacgagctggtccgcacacaggcttcc
ctgcaggccatccgggccgagaaggagacgctgcagagggaggttcaggagctgcaggat
ttcctgctgaggctggagcccttcccacctccctcccacagccaagccgctggctcaggc
agtggttccagcagttctggggcagatggggagccctgggggactcaggactccttctcc
ctggctgaccccctgctccggcgcctccagagcaattctagcacccagattcttgggtct
ctcccgacccagcccctcacccctgagatgcacatcatggaaacccagatggagcagctc
caggggagcatcgagaagctcaaatgctttaaccgtctgctgtcagctgtgctccagggg
tacaagggccgctgtgagggcctcagcatgcagctcagccagcgggaggctgaggccaca
gcactccgtctggccttgcagtacagtgagcactgtgaggaggcatacggggccctgctt
gctctgcgggaggccgactcaggagcaggggacctacaggcagctgaaaaggaagcattg
aggctgctggcacaagaagaggctgccatggatggaggaacactgcagggtccacagcca
agcccggagggcagcagtgtggataagcccacaccacaggaagtggctatccagctccga
gattacatccagcgtctccaggagcgccgtgctctggtgaagattctcccagagcctgga
tctaccttggcacccatgcccactgtgccccgtgcagaagccatagtgcaggccattctg
gggacccagcctggcccagccttgccccggctggaaaagatgcagatccagcaggacctg
gtggacacaagggagtccctggcagacctgatgctgcggctgcaactggtgcggcgggaa
aagcggggcctggaactgcgggaggctgcgctctgagcccagggcccggctcacgtgctc
ctgctggagcagctgcggtgggagcgggcacagctccgggctggcgggccgagtggcagt
ggcggagacagcagcggaggtggaagcagtggggacgaggaggaatggtcccagggccct
cctgttgtccctggtggcattggtggcattgatggaggccaggtgggcagagtgtgggat
ccagataaattagcgcaggaactggcagcgtcgctcaccagggccgtggacctgcgcgag
cagctccagtctctgcgagagaagctggaacaggtggctcagaaggggcgagccagacgg
gctcagggtgctgagctgaacagcgatttatgcagagctcacagcgccctggtcctggcc
tttcgaggagcccaccggaagcaggaagagcaacgtcggaagctggagcagcagatggcg
ctcatggagacccagcacgccaaggagctggcagtgctagaagccactgcaggggccctg
gggaagcccaggccaccccgcctgcctccccgactgggggagacctttttgtag
DBGET
integrated database retrieval system
