Propithecus coquereli (Coquerel's sifaka): 105818228
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Entry
105818228 CDS
T08746
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03022
Basal transcription factors
pcoq03420
Nucleotide excision repair
pcoq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105818228 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
105818228 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
105818228 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoq03021
]
105818228 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105818228 (GTF2H1)
Transcription machinery [BR:
pcoq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105818228 (GTF2H1)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105818228 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
105818228
NCBI-ProteinID:
XP_012509622
Ensembl:
ENSPCOG00000016794
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MVLPVTCPQTPRSQRWRRDPPVTEAVATAAAAGFQPLPSSGSKQHSGTRPDPTQLLPAQS
CSSHLHLQATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADI
KCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKE
LEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAF
LADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYF
HRDRLNTGSKDLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTS
NSKSIKENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVK
RAKLQESIEYEDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQE
MEAYTPKLTQVEMVPNDIQSELKHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLER
FQVTKLCPFQDKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQSRRLMKKT
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtacttccggtcacgtgccctcagactcctcgcagccagcgatggaggcgagacccc
ccagtaacagaggcggtagcgactgctgcggccgctgggtttcagcctcttcccagcagc
ggctctaagcagcacagcggaactcgacccgacccaacccagttactccctgcccagagc
tgtagctcccacctgcaccttcaagccaccatggctacttcatcggaagaagttttgctg
attgtgaagaaggtgcgccaaaagaagcaggatggagctctatacctaatggcagaaaga
atcgcttgggcacctgaaggcaaagatagatttacaatcagccatatgtatgcggatatt
aaatgccagaaaatcagtccagaaggaaaagctaaaattcaacttcagctggtcctgcat
gcaggggacacaactaacttccatttttccaatgaaagcacagcagtgaaagagcgagat
gcagtaaaggaccttcttcagcagctgctgcctaaattcaagaggaaagcaaataaagaa
ctggaagaaaaaaacagaatgctgcaagaagatcctgttttgtttcagctttataaagac
cttgttgtgagtcaagtaatcagtgctgaggaattctgggccaatcgtttaaatgtgaat
gcaacagatagttcttccacatccaatcataagcaggatgttggcatttctgcagcattt
ctggctgatgtccggccccaaaccgatggctgcaatggtctgagatataatttaacctct
gatattatcgagtccatatttaggacctatccagcagtaaaaatgaaatatgcagagaat
gttccccacaacatgaccgagaaggaattctggacacgttttttccagtcccattacttt
cacagggaccggctgaatacagggtcaaaggatctctttgcagaatgtgccaaaatagat
gaaaaagggttaaaaacaatggtttcattaggagtgaaaaacccactactagatttgaca
gctttagaagataaaccattagatgagggctatggcatttcctctgtgccatctacttcc
aattctaaatccataaaagaaaacagtaatgctgccatcatcaagaggtttaaccatcac
agtgccatggtcctggcagcaggactcaggaaacaagaagcacaaaatgaacaaaatggt
gagcccagcagcatcgatggaaattctggagatgcagactgctttcagccagcagtcaaa
agggctaagttacaagagtccattgaatatgaagacctgggaaaaaataattccgtaaaa
acaattgcactaaacctcaagaagtcagataggtattaccatggtccaactccaatccag
tcactacagtatgcaacgagtcaggacattattaattcttttcaaagtattagacaagaa
atggaagcttatacacccaagttaactcaggtggagatggtgccaaacgatattcagtct
gaattgaaacacttgtatgtagctgttggagagctacttcggcatttctggtcctgcttt
cctgttaatacaccattcctagaagaaaaggtagtaaaaatgaaaagtaatttagaacga
ttccaagttacaaagctctgcccattccaagacaaaattcggagacagtatttaagcaca
aatttggtaagtcacatagaagagatgctccagacggcctacaacaagctccacacctgg
cagtcacggcgcttgatgaagaagacgtga
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