Propithecus coquereli (Coquerel's sifaka): 105819549
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Entry
105819549 CDS
T08746
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
105819549 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoq04040
]
105819549 (SCN2A)
Ion channels [BR:
pcoq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105819549 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
105819549
NCBI-ProteinID:
XP_012511275
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAQRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSVPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTIFNRTISMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKDDRVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRTKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEAKP
LRGSCQWFCYRCQQHVCSLKQEVEKETGVKTSNTCCISPFELFFIFFYTISVLNLFLALL
LSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKRKIREFIQKAFVRKQKALDEIKPL
EDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLT
VTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATTSSSEGSTVDIGAPAEGEQPEVEP
EESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKTCYKIVEHNWFETFIVFMILLS
SGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQMYFTNAWCWLDFLI
VDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVL
LVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARWKNV
KVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGS
FFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQ
GMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLK
LISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIK
GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFG
NSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGSSVKGDCGNPSVGIFFFVSYII
ISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDF
ADALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEE
RFMASNPSKVSYEPITTTLKRKQEEVSAIIIQRAYRRYLLKQKVKKVSSIYKKDKGKECD
GTPIKEDPLIDKLNENSTPEKTDVTPSTTSPPSYDSVTKPEKEKFEKDKSEKEDKGKDIR
ETLHKIRSKD
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacagcgcattgcagaagagaaagctcagagacccaaacaggag
cgcaaggatgaggacgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tctcttccatttatttatggagacattcccccagagatggtgtcagtgcctctggaggac
ctggacccctactatatcaataagaaaacgtttatagtattgaataaagggaaagcgatc
tctcggttcagtgccacccctgccctgtacattttaactcccttcaatcctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcatcatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acttttacaggaatttatacttttgaatcacttattaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctccgggatccatggaattggttggatttcacagtcattacc
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtcttgagagctttgaaaactatttctgtaattccaggcctgaagaccattgtgggggct
ctgattcagtcagtgaagaagctttctgatgtcatgatcctgactgtgttctgtctgagt
gtatttgcgctaataggactgcagctgttcatgggcaacttgcggaataaatgtttgcaa
tggcccccagataattcttcctttgaaataaatatcacttccttctttaataactcattg
gatgggaatggtaccattttcaatcggacaatcagcatgtttaactgggatgaatatatt
gaggacaaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtcctgaaggatacatctgtgtgaaggctggcagaaacccc
aactatggctatacaagctttgacacttttagttgggcctttttgtccttatttcgtctc
atgactcaagacttctgggaaaacctctatcaactgacactacgtgctgctgggaaaacg
tacatgatattttttgtgctggttattttcttgggctcattctaccttataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaaccaggcaacactggaagaggctgaa
cagaaggaagctgaatttcagcagatgcttgaacagttaaaaaagcaacaggaagaagct
caggcagcagctgcagcagcatctgctgaatcaagagacttcagtggagctggtggaata
ggagttttctcagaaagttcttcagtagcatcaaaattgagctctaagagtgaaaaagag
ctgaaaaacagaagaaagaaaaagaaacagaaagaacagtctggagaagaagagaaggat
gacagagtccgaaaatctgaatctgaagacagcataagaagaaaaggcttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagagattttcttctccacaccagtctttattg
agcatccgtggctcgcttttctctccaagacgtaacagtagggcgagccttttcagtttc
agaggtcgaacaaaggatattggctccgagaatgacttcgctgacgatgagcacagcacc
ttcgaggacaatgatagccgaagagactctctgtttgtgccgcacaggcatggagaacgg
cgccacagcaatgtcagccaggccagccgcgcctccagggtgcttcctattctgcccatg
aatggcaagatgcacagtgccgtggattgcaatggcgtggtctccctggtcggaggccct
tctgcgctcacctctcctgctgggcagctcctgccagagggcaccactactgaaacagaa
ataagaaagagacggtccagttcttatcatgtttccatggatttgttggaagatcctaca
tcaaggcaaagagcaatgagtatggccagtattttgaccaacactatggaagcaaaacca
ctgagaggaagctgccagtggttctgctaccgatgtcagcagcatgtctgctccctaaag
caggaagtagagaaggagacaggtgtcaagacgagcaacacctgctgcatttctcctttt
gaacttttctttatttttttctacacaatttctgttctgaacctcttcttggccttgctt
ttgagttccttcagttccgacaatcttgctgccactgatgatgataatgaaatgaataat
ctccagattgctgtgggaaggatgcagaaaggaattgattttgttaaaagaaaaatacgt
gaatttattcagaaagcctttgttcgaaaacagaaagctttagatgaaattaaacctctt
gaagatctaaataacaaaaaggacagctgtatttccaaccataccaccatagaaattggc
aaagacctcaattatctcaaggatggaaatggaactactagtggcataggcagcagtgta
gaaaagtatgtcgtggatgaaagtgattacatgtcatttataaacaaccccagcctcact
gtgacggtaccaattgctgttggagaatctgactttgaaaacttaaatactgaagaattc
agcagtgagtcagatatggaagaaagcaaagagaagctaaatgcaactactagttcatct
gaaggcagcacagttgatataggagctcccgctgagggagaacaacctgaggttgaacct
gaagaatccctggaacctgaagcctgttttacagaagactgtgtgcggaagttcaaatgt
tgtcagataagcatagaagaaggcaaagggaaactctggtggaatttgagaaaaacttgc
tataagatagtggagcacaattggtttgaaaccttcatcgtcttcatgattctgctgagc
agtggggctctggcctttgaagatatatatattgagcagcgaaaaaccattaagaccatg
ttagaatatgctgacaaggttttcacttatatattcattttggaaatgctgctaaagtgg
gttgcatatggttttcaaatgtattttaccaacgcctggtgctggctagacttcctgatt
gttgacgtgtcattggttagcttaactgcaaatgccttgggttactcagaacttggtgcc
atcaaatccctcaggacactaagagctctgaggcccctgagagccttatcccggtttgaa
ggaatgagggttgttgtaaatgctcttttaggagccattccatccataatgaatgtactt
ctggtttgtctgatcttttggctaatattcagtatcatgggagtgaatctctttgctggc
aagttttaccattgtattaactatactactggagagatgtttgatgtaagcgtggtcaac
aactatagtgaatgtaaagccctcatagagagcaatcaaactgccaggtggaaaaatgtg
aaagtaaactttgataatgtgggacttggatatctttctctgcttcaagtagccacattt
aagggatggatggatatcatgtatgcagctgttgactcacgaaatgtagaattacaaccc
aagtatgaagacaatctgtacatgtatctttattttgtcatctttattatttttggttca
ttctttactttgaatcttttcattggtgtcatcatagataacttcaaccaacagaaaaag
aagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaacgcaatg
aaaaaactgggttctaagaaaccacaaaaacccatacctcgacctgccaacaaattccaa
ggaatggtctttgattttgtgaccaaacaagtctttgatatcagcatcatgatcctcatc
tgcctcaacatggtcactatgatggtggaaactgacgaccagagtcaagaaatgacaaac
attctgtactggattaatttggtgtttattgtcctctttactggagaatgtgtgctgaaa
ctaatctctcttcgttattactatttcaccattggatggaatatttttgattttgtggtg
gtcattctctccatcgtaggtatgtttctggctgagctgatagaaaaatattttgtgtcc
cccaccctgttccgtgtgatccgtcttgccaggattggccgaatcctacgtctgatcaaa
ggagcgaaggggatccgcacgctgctctttgctctgatgatgtcccttcccgcgttgttt
aacatcggcctcctgctcttcctggtcatgttcatctatgccatctttgggatgtccaac
tttgcctatgttaagagagaggttggaattgatgacatgttcaactttgagacctttggc
aacagcatgatctgcctgttccaaattaccacctcggctggctgggatggattgctggca
cctattcttaatagtggacctccagactgtgaccctgaaaaagatcaccctggaagctca
gtcaagggagactgtgggaacccatctgttgggattttcttttttgtcagttacatcatc
atatcctttctggttgtggtgaacatgtacattgccgtcatcctggagaacttcagtgtt
gctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctacgaggtt
tgggagaagtttgatcctgacgcgacccagttcatagagttcgccaagctctcagatttt
gcggatgccctggatcctcctcttctcatagcaaaaccaaacaaagttcagcttattgcc
atggatctgcccatggtcagtggcgaccggatccactgcctcgatattttatttgccttt
acaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatacagatggaagag
cgatttatggcatcgaacccctccaaagtctcctatgagcccatcacaaccactttgaaa
cgcaaacaagaggaggtgtctgctatcattattcagagggcttacagacgctacctcttg
aagcaaaaagttaaaaaggtttcaagtatatataagaaagacaaaggcaaagaatgtgat
ggaacacctatcaaagaagatcccctcattgataaactaaatgagaattcaactccagag
aaaaccgatgtgacaccttccaccacttctccaccttcgtatgatagtgtgaccaaaccg
gaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagatatcagg
gaaacacttcacaaaataagaagcaaggactaa
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