KEGG   Propithecus coquereli (Coquerel's sifaka): 105820023
Entry
105820023         CDS       T08746                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
pcoq  Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03013  Nucleocytoplasmic transport
pcoq03015  mRNA surveillance pathway
pcoq03040  Spliceosome
pcoq05014  Amyotrophic lateral sclerosis
pcoq05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcoq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105820023 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105820023 (ALYREF)
   03015 mRNA surveillance pathway
    105820023 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105820023 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105820023 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoq03019]
    105820023 (ALYREF)
   03041 Spliceosome [BR:pcoq03041]
    105820023 (ALYREF)
Messenger RNA biogenesis [BR:pcoq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105820023 (ALYREF)
    TREX complex
     105820023 (ALYREF)
Spliceosome [BR:pcoq03041]
 Complex C
  Other components
   EJC/TREX
    105820023 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105820023 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 105820023
NCBI-ProteinID: XP_012511861
Ensembl: ENSPCOG00000020874
LinkDB
Position
Unknown
AA seq 256 aa
MADKMDMSLDDIIKMNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGAIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGTRRGTRGGTRGRGRGTGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggacatgtctctggacgacatcattaaaatgaaccggagccagcga
ggcggtcgcggcgggggccggggccgcggtcgggccggctcccagggcggccgcggcggc
ggagcgcaggccgccgcgcgagtgaatcgaggcggcggggccatccggaaccggccggcc
atcgcccgcggtgcggccggcggcggcggcagaaaccgaccggcgccctacagcaggcca
aaacagcttcctgacaagtggcagcacgatctttttgacagtggcttcgggggtggtgcc
ggtgtggagacaggtgggaaactgctggtgtcaaatctggattttggcgtgtcagatgct
gatattcaggagctctttgccgagtttggaacactgaagaaggcagccgtgcactacgat
cgctccggccgcagtttaggaacagcagacgtgcactttgaacggaaggcagacgccttg
aaggcgatgaaacagtacaacggtgtccctttggacggccgccctatgaacattcaactt
gttacatcacagatcgatacgcagcggagacccgcgcagagtgtaaacagaggcggcatg
actagaaaccgtggttccggaggttttggtggtggtggcacccggagaggcacccgtgga
ggcacccggggaagaggcagaggcactggcagaaactcaaagcagcaactttctgcagag
gagttggacgcccagctggatgcctataatgcaaggatggacaccagttaa

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