Propithecus coquereli (Coquerel's sifaka): 105821098
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Entry
105821098 CDS
T08746
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoq03000
]
105821098 (RC3H1)
04121 Ubiquitin system [BR:
pcoq04121
]
105821098 (RC3H1)
Transcription factors [BR:
pcoq03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
105821098 (RC3H1)
Ubiquitin system [BR:
pcoq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105821098 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-CCCH_UNK
zf_CCCH_4
zf-CCCH_4
DUF6661
Vesi_VP2
PaaA_PaaC
Motif
Other DBs
NCBI-GeneID:
105821098
NCBI-ProteinID:
XP_012513178
Ensembl:
ENSPCOG00000021795
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MAPAAGAASAAAGGKPEAALEVAAAAVARRPGTESESTVPEQQPITLCSGVEDTKHYEEA
KKCVEELALYLKPLSSARAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK
TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIA
PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL
LANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMC
RDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPD
EGAVDLPSRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSNLKPGKIDHLSSSAPGSPPDL
LESVPKSISALPVNPHPVPARGPADLPAMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGA
APPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQP
QQYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERFQPMEGYY
PVAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPS
PTLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVE
MMNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGAGPIQAM
APQGAPTKSVNISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLP
SAEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQPQPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSLENQCSLDVKSKLNTSKQAENGQPEPQNKVPAEDLT
LTFSDVPNGSALTQENISLLSNKTGSLNLSEDPEGGGDNNDSQKSGVSPSSAP
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgctgcaggagcagcctcagcagcagcaggtgggaagccggaggcggcgctg
gaggtggccgcggcagccgtggcccggcggcctgggacagagtcagagtcgacggtacct
gagcagcagcccattactttgtgtagtggagttgaagacacaaaacattatgaggaagcc
aagaaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagagcaatg
caggaggaagctctaaaactggttctactggccttagaagatggatctgctttgtcaaga
aaagtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaa
actagcattgggcatgttgttcaactcctttatagagcctcctgcttcaaggtcaccaaa
cgtgatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctg
cggcgggaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgca
ccagaccagtggtcctctttgctttacggagaccagtctcacaaatctcatatgcagtcc
attattgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaactaacgatt
gctctccagcggactggagaccctgcaaacttgaaccgactaagaccccatttggagctg
ttagcaaacattgatcctagtccagatgctcctcctcctacttgggaacagctagaaaat
gggctggttgctgtgcgtacagtagtacatggtctggttgattatatccagaaccacagc
aaaaaaggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgt
cgagatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacattca
caggaggaactagaaaaatttcgcaagatgaacaagcgcctggttcccagaagacccctg
agtgcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccagat
gaaggtgcagtggatctgcctagcagaaaacctcctgctctgccaaatggaattgtatca
gcagggaatacagtaacacagcttattccacgagggacggaccccagctatgattctaat
ctgaagccaggaaagatagatcatctaagcagtagtgctcctggatcccctcctgacctg
ctagaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctgca
agggggccagcagatctgcctgccatgcctgtcaccaaaccacttcagatggtcccacga
ggttctcagttatatccagcacagcaggcagatgtgtattatcaggatcctcggggagct
gctccaccgtttgaaccagcaccatatcaacagggcatgtactatactccaccaccacag
tgtgtgtcccgctttgtccgaccaccaccgtctgctcccgaacctggtcctccatacttg
gatcattatccaccctacctccaagatcgtgtagtaaactctcagtatggcacacagcca
caacagtacccacctatgtacccacctcactatgatggccgacgagtataccctgctcag
tcttacacgagagaagagatattccgagaaagccctatacccattgagattccacctgca
gcagtaccatcctatgtaccggaatccagagaaagattccagccgatggagggttactat
ccagtggctcctcatccaactcagatcagaccttcgtacctcagagagcctccttatagc
cggcttcctcctcctccccagccccatcctagtctagatgaactacatcgccggcgaaag
gaaataatggcccaactagaggaaagaaaggttatctctccacctccttttgcaccttca
ccaacattgcctcctaccttccatcaagaggaatttttggatgaagacttgaaggtagct
gggaaatacaaaggaaatgattatagccagtactctccctggtcatgtgacaccatcggc
tcctacattggaaccaaagatgcaaaaccaaaagatgttgtggcagcagggagtgtggaa
atgatgaatgtggagagtaaaggaatgagagaccagagattggatcttcagagaagagca
gcagaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtatctcggttt
ggtgccatctctcgaacttccaaaacaatgtatcagggtgctggcccaattcaggctatg
gcacctcagggagctcccacaaaatctgttaacatttcggattatagtccatatggaacc
catggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacac
ttcagtgagagggagagaatatccatgtctgaagtggccagtcatggaaaaccccttcca
tctgctgagcgagagcagctacgactggaattgcagcagctgaaccaccagattagtcag
cagacccagctacgtggactagaggccgttagtaacaggctggtgttgcagagggaggca
aacaccctggcaggccagccacagcccccaccaccacctccaaaatggcctggaatgatc
tcaagtgagcagttgagcttggaactgcaccaagtggaaagggaaatcgggaagagaacc
cgggaactgagtctggagaaccagtgttctctggacgtgaaaagcaaattgaatacaagt
aagcaagcagagaatggacaaccagaaccacaaaacaaagttccagctgaggaccttaca
ttgacattcagtgatgtaccgaatggatcagccttgacacaagagaatatcagcctccta
tcaaacaagaccggctctctgaacctatcagaggatcccgagggaggaggagataacaat
gactcccagaaatcaggagtttctcccagttctgctccctaa
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integrated database retrieval system
