Propithecus coquereli (Coquerel's sifaka): 105821860
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Entry
105821860 CDS
T08746
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105821860 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoq00536
]
105821860 (COL13A1)
Glycosaminoglycan binding proteins [BR:
pcoq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105821860 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
105821860
NCBI-ProteinID:
XP_012514118
Ensembl:
ENSPCOG00000018840
UniProt:
A0A2K6FK95
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAAERARGPGELGAPGTVALATARAERCARLPSPGSCGLLALALCSLALSLLAHFRTAEL
QARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTG
RPGLPGEKGAIGMPGRVGVPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGP
KGEMGLTGPRGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAG
IQGPPGPPGPPGPIGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG
KHGAKGAPGIAVAGMKGEPGTPGAKGEKGAAGSPGLPGLLGQKGEKGDAGNSIGGGRGEP
GPPGLPGPPGPKGEAGVNGQPGPPGRQGDKGEPGAAGEQGPAGPKGPKGEPGKGEMVDYN
GNINEALQEIRTLALMGPPGLPGQIGPPGPPGIPGQKGEVGLPGPPGHDGEKGPRGKPGD
MGPPGPQGPPGKDGPPGVKGESGHPGSPGEKGEKGDMGQAGSPGEKGEAGEKGDQGAEVP
GPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGTPGPIGVPGPA
GPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLD
APCPLGEDGLPVQGCWNK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagcgtgcccgcggccccggggagctgggcgcgccggggacggtggcgctg
gctacggcgcgggcggagcgctgcgcgcggctgccgagcccggggtcgtgcgggctgctg
gcgctggccctctgctcgctggcgctcagcctgctcgcccactttcggacggcggagctg
caggcccgggtgctgcgcctggaagcggagcgcggggagcagcagatggagacggctatt
ttgggacgagtcaaccaactgctggacgagaaatggaagctccattctcgcaggcgccgg
gaggctccgaagacgtctccaggatgtaactgcccaccaggacctcctggtcccactgga
agacccggactcccaggggaaaaaggtgccattgggatgcctggacgtgtgggggtcccc
ggagatgctgggctgtccatcatcggtccccgaggcccccctggtcagccaggcacccga
ggttttcccggatttccgggtcccattgggctagacggcaaaccgggccaccccggacca
aagggggagatgggtctgacaggcccccgaggacagccgggacctcaaggacaaaaagga
gaaaaggggcagtgtggagagtacccgcaccggctgctgcctctcctcaattcagtgcga
ctggctccacccccagtcataaaaaggcggaccttccagggtgaacagggccaggccggc
atccaaggtccaccaggtccaccaggcccccctggaccgattggacctctggggcaccca
ggactgccagggcccatggggccacccggcttacctgggcctcctggaccaaagggagac
ccagggatccagggctaccatggccggaagggagaacggggcatgccagggatgccgggc
aagcatggcgccaagggggctcctggaatcgccgtggccgggatgaagggtgagccgggg
accccaggagccaagggtgagaagggggctgcgggctcccctgggctgcctggcctcctg
gggcagaagggagagaaaggcgatgctggcaactccatcggaggtggcagaggggagccc
ggccccccagggctccctgggcccccaggaccaaagggagaagcaggtgtcaatggccag
cctggccccccaggacggcaaggagacaagggggagcccggagcagctggagaacagggg
ccggctggccccaagggccccaagggagaaccagggaaaggcgagatggtggattacaac
gggaacatcaacgaggctctccaggagatccgaacgctggccttaatggggcctccaggt
cttcctgggcaaattggcccacccggacctccagggattccaggccagaagggggaggtc
ggactgccaggccctccgggacacgatggggaaaagggacctcgaggcaaaccaggagac
atgggcccccctggtccccaaggacccccggggaaggacggccctccaggagtgaaggga
gaaagcgggcacccagggagcccaggagagaagggagagaagggggacatgggacaagca
ggctcaccgggcgagaaaggagaagccggggagaaaggtgaccagggagcagaggttcct
gggccaccagggccagaggggcctcctggacctccggggctccagggtgttcctggacca
aagggggaagcagggctggacggagcgaaaggagagaagggtgtccaaggagaaaaagga
gaccgagggcccctgggactacctggtactccaggaccaattggagttccaggcccagcg
ggaccaaagggcgagaggggcagcaaaggagaccctgggatgacaggaccaacgggagca
gccgggcttcctggtttacacggaccacccggggacaaaggaaaccggggggagaggggg
aagaaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagat
gccccctgtccattgggtgaagacggcttaccagtccagggctgctggaacaagtga
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