Propithecus coquereli (Coquerel's sifaka): 105822090
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Entry
105822090 CDS
T08746
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105822090 (DDX20)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105822090 (DDX20)
Spliceosome [BR:
pcoq03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
105822090 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
105822090
NCBI-ProteinID:
XP_012514481
Ensembl:
ENSPCOG00000025185
UniProt:
A0A2K6GHX3
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MAAAFEPRAALAAVETAMPVEGVAAQVSAPEPTPGPVRSLRTAHDVSGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDIPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
VMMKIAQKCNISLLPLPDPIPPDLMEECLDWDVEVQAAVHTYGLAGVPTQPLKKQIQKME
RTFQTQKAHGNHSASSRNTSVSAQSVKSKNSTKQKLPVKSHSECGIMEKAMSPKESGCAI
RSEEQLKKSVQTPVENSTSGQHQVTEALPVSLPKIPCLSSFKTHQPCTWTFAELVEDYEH
YIKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRVMEERVQILASSSQSRDSESDSDSYS
SRTSSQSKGNKSYLEGSSDTQLKDSESAPVDGHISLEQPLNGNDIPNLEQYQQSPEIQIK
ARHKEGVSQRAKQSRRNLPRRSSYRLRTEPQEDGWCDCPGETHPSFSDTYQDYEEYWRAY
YRAWQEYYAAASQSYYWNAQRHPSWMAAYHMNTIYLQEMMRGNQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaaccccgggcggccttagcggcagtggagaccgctatgccggtg
gaaggtgtggccgcacaggtctcggccccagagccaacccctgggcccgtgcggagccta
cggacggctcacgacgttagcggcccgcggacccgcacaggggacgtactactggcggag
ccggcggacttcgagtcgctgcttctttcgcggcctgtgctggaggggctgcgggcggcc
ggcttcgagaggccctcgcccgtgcagctcaaggccatccctctggggcgctgcgggctc
gatttaatcgttcaggctaaatctggcactgggaaaacctgtgtattctccaccattgct
ttggactctcttgttcttgaaaacttaagtacccagattttgatcttggctcctacaaga
gagattgctgtacagatacattctgttatcacagctattggaatcaaaatggaaggctta
gagtgtcatgtctttattggagggaccccgttatcacaagacaaaaccagacttaaaaaa
tgtcatattgctgttgggtctcctggcagaattaaacaacttatagaacttgactacttg
aacccaggcagtatacgtctctttattcttgatgaagcagataagctcttagaagaaggc
agcttccaggagcaaattaattggatttattcttctttgcctgccagtaaacagatgttg
gcagtatcagctacttaccctgaatttttggctaatgctttgacaaagtacatgagagat
cccacttttgtaaggctgaattccagtgatccaagtctgataggtttgaagcagtattac
aaaattgtcaattcataccctttggctcataagatttttgaggaaaagactcaacattta
caggaactcttcagcagaattccatttaatcaagccttagtcttttctaatttgcacagc
agagcacaacatttggctgatatcctttcttctaaaggctttcctgctgaatgcatttca
ggcaacatgaatcagaatcagcgtcttgatgctatggctaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgtgggattgatgctgagaaggtgaatttg
gttgtaaatctggatataccattggactgggagacatatatgcatcggattggcagagct
ggacgttttggtactttgggactgacagtgacctactgttgccggggagaagaagaaaat
gtaatgatgaaaattgctcagaaatgtaatatcagccttctccctttaccagatcccatt
cctcctgatctgatggaagaatgtttggattgggatgtggaggttcaagctgctgtgcat
acctatggcttagcaggtgtacctacccaacccctgaaaaagcaaattcaaaaaatggag
agaacctttcaaactcagaaagctcatggtaaccactcggcttcctctagaaatacttct
gtatctgcacagtctgtcaaatcaaaaaatagtaccaaacaaaagcttcctgtgaaaagc
cactcagagtgcggaatcatggaaaaagcaatgtctccaaaagaatcgggttgtgccata
cgatcggaagagcaattaaagaaatctgttcagacccctgttgagaactctaccagcggt
cagcaccaggtcacagaagctttacctgtgtcactccccaaaattccttgtctgtcttcc
tttaaaacccatcagccatgcacttggacctttgcagaattggtagaggattatgaacac
tatattaaagaggggttagagaaacctgtggaaatcatccggcactatacaggtcctggg
gatcagactgtgaatcctcaaaatggttttgtgagaaatagagttatggaagagagagtc
cagatattggcaagtagtagccaatctcgagactctgagagtgacagtgattcttacagc
tcgaggacttcttcccagagcaaaggaaataagtcatacttagaaggttcttcagatact
cagctgaaagattctgaatctgctcctgtggatggtcatatctctttggaacaacctctg
aatggaaatgacatccccaatctagagcaatatcagcaatcacctgagatccagataaag
gcaaggcataaagagggggttagccagagagctaagcagagccggagaaacctacccagg
cgatcttcctatcgattgcggacagaaccccaggaagatggttggtgtgactgtcctggg
gaaacacatccgagtttttctgatacctatcaggattatgaggagtactggagagcttac
tacagagcatggcaagagtattatgctgctgcatctcagtcatattattggaatgctcag
agacatccgagctggatggcagcctatcacatgaataccatttatttacaagaaatgatg
cgtggtaaccagtga
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