Propithecus coquereli (Coquerel's sifaka): 105822522
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Entry
105822522 CDS
T08746
Symbol
YTHDC2
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105822522 (YTHDC2)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105822522 (YTHDC2)
Spliceosome [BR:
pcoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105822522 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
R3H
Helicase_C
Ank_2
HA2_N
nSTAND3
Ank
AAA_19
DEAD
ATPase
PhoH
AAA_7
AAA_16
AAA_22
AAA_29
T2SSE
SRP54
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
105822522
NCBI-ProteinID:
XP_012514963
Ensembl:
ENSPCOG00000017526
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MSRPSSVSPRPPAPAGGGGGGGGGGSGGGGGGPAPCGPGGGGRAKGLKDIRIDEEVKIAV
NIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSE
TAHAMMTCNLTHNTKHAVRSLIQRFPVTNKEHTELLPKTERGNVFAVEAENREMSKTSGR
LNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQF
LLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRMHLGPDDE
VHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIHIQGRPFEVKE
MFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRNVPNETE
EYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDTCLSDIWLHKDVDAFAQVFHLILTENV
SVDYRHSDTSATALMVAAGRGFASQVEQLISMGANVHNKASNGWMALDWAKHFGQTEIVD
LLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC
HSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNP
PAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEVCMVKLAGRCRPGICFRLFSRLRFQN
MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAM
DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK
RAAMLCRKRFTAGTFSDHMALLFFLXAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQ
LLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEK
KVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVT
VLVFCGPARLASNALQEPSSFRVDGLPNDSSDSEMEDRTTASLAALKLDEWLNFKLEPEA
ASLLLQLRQKWHSLFLRRMRAQSKPWSQVDEATIRVIIAVLSTEEQSAGLQQPSGIGQRP
RPMSSEELPLTSSWRSNNSRKSSADAEFADESTTAERVLMKSPSPALHPPQKYKDRGILH
PKRSTDDRSDQSSVKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLR
NLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQD
WGSAGLGGVFKVEWIQKESLPFQFAHHLLNPWNDNKKVQISRDGQSNPWVGKGGSSVPEV
AQQQLLLGGHRGVQLCLPLWLLVTQWEKMLVSSAEQATGDHSGSHHIG
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggccgccagctcctgccggtggcggcggcggc
ggcggcggcggcgggagcggaggcggagggggcggcccggcgccgtgtggccctgggggc
ggcggccgggccaaggggctgaaggacattcgtattgatgaggaggtgaagatcgcagtt
aatatcgccctggagcgcttccgatacggggaccagagagaaatggaatttccttcttct
ttgaccagtactgaaagagcctttattcatcgattgagtcagtctcttggtttggtctct
aaaagtaaaggaaagggagcaaatagatacctaactgtgaagaagaaagatggatcagaa
acagctcatgcaatgatgacctgtaatttgactcataatacaaaacatgctgttaggagc
ctaattcaaagatttcctgtgaccaataaagagcatactgaacttctgcctaagacagaa
agaggaaatgtgtttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcga
ctcaacaatggcatacctcagattccagtgaaaagaggagaatctgaatttgattctttt
aggcagtctttaccagtgtttgagaaacaagaagaaattgttaaaataataaaggaaaat
aaagtagttttgattgtaggagaaactggttctggaaagaccacacagattcctcaattc
cttttagatgattgctttaaaaatggtatcccctgccgtatattttgtactcaaccaaga
cgattagcagctattgctgtggctgaaagagttgctgcagagagacgggaaaggattggt
caaacaattggttatcagatccgattagaaagcaggatgcacctgggccctgatgatgaa
gtgcatgaaagggatcgatttagtgattttttacttacaaagttaagagatttgttgcaa
aagcacccaactttgaaactaattctttctagtgctgccttggatgtaaatctctttata
agatattttggaagttgtccagtgatacatatacagggaagaccatttgaggtaaaagag
atgtttctggaagatattttaagaactactggatatacaaacaaagaaatgttaaagtac
aaaaaggaaaaacagagagaggagaaacaacaaaccacacttacagaatggtactcagct
caagagaatactttcaagccagaatctcagaggcagagaaatgttccaaatgagactgaa
gagtatgatttattggatgatggtggtgatgctgtcttcagtcagttgacagaaaaagat
gtgaattgtcttgaaccatggctaataaaggaaatggacacttgtctttctgacatatgg
ttacataaagacgttgatgcctttgctcaggtctttcaccttattttaactgaaaatgtt
agtgttgattacagacatagtgataccagtgcaacagctctgatggttgctgcaggacga
ggttttgcaagtcaagtagagcagttaattagtatgggagccaatgtccataataaagca
tcaaatggctggatggcattagattgggctaaacactttgggcagactgaaattgtggat
cttctagaatcttacagtgcttcactggaatttggaaatcttgatgaaagttctctggtt
caaacaaatgggagtgacctcagtgctgaagatagagagctcctgaaagcttatcatcat
agttttgatgatgaaaaagtagacttggatttaatcatgcatcttctatacaatatctgc
catagttgtgatgctggtgcagtattaattttcttacctggatatgatgaaattgttgga
ctgagggatcgcatcctgtttgatgacaagcggtttgctgacaatacacatagatatcag
gtctttatgcttcattcaaatatgcaaacatccgatcaaaagaaggtattaaaaaaccca
cctgcaggtgttcgaaaaataatcctttccaccaatattgctgaaactagcatcacagtc
aatgatgttgtctttgttattgattctggtaaggttaaagaggtatgtatggttaagctg
gcagggcgatgtagacctggaatttgtttccgtctattcagtagactccgattccagaat
atgttggaatttcagactccagaacttttgagaatgccattacaggaactttgtttacat
accaagctgctagccccagttaattgtcccattgctgatttccttatgaaagcacctgaa
cctccaccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatg
gatacatgggaagatctgactgaacttggttatcatttggctgacttgccggtagaacca
catcttggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccccatccttaca
attgcctgcacgctagcttatcgagatccttttgtactacctactcaggcctctcaaaaa
cgtgcagctatgctttgtaggaaacgtttcactgcaggaactttcagtgaccatatggca
ttattattttttttataggcatggcagaaagcacgaagtgatgggtgggagcgagccttt
tgtgaaaagaattttctttcacaagctaccatggaaataatcataggcatgagaacacag
ttgcttggtcaacttagagcatcaggttttgttagagcacgaggaggtggtgacattcgg
gatgttaacacaaactctgagaactgggctgttgttaaagctgcattggtggcaggcatg
tatcctaatttagtccacgtggacagagagaatgtagtattgacagggccaaaggagaaa
aaagtacgatttcatcccacttcagttctcagtcagcctcaatataaaaagattcctcca
gccaatggtcaagctgcagcaattcaggcactgcccacagattggctcatttatgatgaa
atgaccagagctcatagaatagctaatatcagatgttgttcagcagtgacaccggtcact
gtattggtattctgtggaccagctaggttggcaagtaatgctcttcaagaaccttcgtcc
tttagagtggatggccttcccaatgacagtagtgacagtgaaatggaggacagaactact
gctagtttggcagccttgaaacttgatgagtggctcaatttcaaactagagccagaggca
gccagtttattgctgcaactcagacagaagtggcatagcttatttttacgccgaatgagg
gcacaatctaaaccttggtctcaagttgatgaagctaccataagagtaattatagctgtt
ttaagcactgaagaacagtctgcaggtttacagcaaccatctgggattggccaaaggcca
aggcctatgtcttcagaagaacttcctttaacatcatcttggagatcaaataatagtagg
aaaagttcagcagatgctgaatttgctgatgaatctactactgcagaaagagtattgatg
aaatctccatctccggcattacacccacctcaaaagtacaaagatagaggaattttacat
cctaaacgaagcactgatgaccgatcagatcaatcttctgtgaaatctacagacagcagt
agttacccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatct
ccttcaccaagaccaaacatgcctattcgatacttcataatgaagagtagcaatttgaga
aaccttgaaatttctcagcagaagggcatctggtctacaacccctagtaatgagcggaag
ctaaatcgagccttttgggaaagcagcatggtttacttggtattttctgttcaaggatct
ggacatttccagggattttctaggatgtcttctgagataggaagggaaaagagccaggac
tggggctcagctggactaggaggagtatttaaggtggagtggatacaaaaagaaagtctt
ccctttcagtttgcacaccatttactcaatccatggaatgacaacaagaaagtccagata
agcagagatggacagtcaaatccctgggttggaaaaggtggcagttctgttcctgaagtg
gctcaacagcagctgcttcttggtgggcacaggggtgtgcagctgtgtctccctctttgg
ctgttggttactcagtgggaaaagatgctggtgtcctctgcagagcaggccactggggac
cacagtggttcccaccacattggctga
DBGET
integrated database retrieval system
