Propithecus coquereli (Coquerel's sifaka): 105823371
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Entry
105823371 CDS
T08746
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105823371 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105823371 (EDC4)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105823371 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
105823371 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EDC4L
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
105823371
NCBI-ProteinID:
XP_012516009
Ensembl:
ENSPCOG00000020076
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPTAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TSKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALINGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLEMLRSNHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHRKQ
DPEIPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGPDGAHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVTPLPTHTA
HEDFAFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQLD
GSLTMSSSSGLQASPRSLLPGLLPGPADKLTPKGPGQVPTAASALSLELQEVEPLGLPQA
SPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPR
PRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEATTPDSQVWPTAPDITRETCSTLA
ESPRNGLQEKHKSLAFHRPPYHLLPQHDSQDASAEQSDHDDEVASLASASGGFGTKVPTP
RLPTKDWKTKGSPRSSPKLKRKSKKDDGDSAMGSRLTEHQCYWQVAEPPEDWPALIWQQQ
RELAELRHSQEELLQRLCTQLEGLQNTVMGHVERALETRHEQEQRRLERALAEGQQRGGQ
LQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVE
GSMKENISKLLKSKLLPLPQNLTDTIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQA
MFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATV
SSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGT
PVPSAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCP
LSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQF
LQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttgcgcgagcatcgacatagaggacgccacgcagcacctgcgggacatcctc
aagctggaccggccggcggggggccccactgcagagagccctcggccatccagcgcctac
aacggggaccttaatggactcctggtcccagaccctctctgctcaggtgatggtacctca
acaagcaagactggtctccggaccatgccgcccattaatctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctccacctgcattgggattttggccaaggaggtagagatt
gtggccagcagtgactctagcatttcgagcaaggcccgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtacgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcttatgccattcgggctgccaacaatggctcagcgatggtgcgg
gtgatcagtgtcagcacttcggagcggaccctgctcaagggcttcacaggcagtgtggcc
gatctggcctttgcgcacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcgcttggctctgattaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacaccactgaaccacttccgtaggatcatctggtgccccttc
atccctgaggagagtgaggattgctgtgaggagagcagcccaacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggaaatgctccgttccaaccacagcacctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtgaaaggccacagcacgtgtcta
agtgaaggagcactctcccctgacgggactgtcctggctactgcaagccatgatggctac
gtcaagttctggcagatctacattgaggggcaggatgagccaaggtgtctgcatgagtgg
aagcctcacgacgggcggcccctctcctgtctcctattctgtgacaaccataggaagcag
gaccctgagatccctttctggaggttccttattactggtgctgaccagaatcgggagctc
aagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagatatc
ttcagttcagtgagtgtgccccccagcctcaaggtttgcctggacctgtcagcggaatac
ctgattctcagcgatgtccaacggaaggtcctctacgtgatggagctgctgcagaaccag
gaggagggccgtgcctgtttcagctccatctcagagttcctgctcacccaccctgtactg
agctttgggatccaggttgtgagtcgctgccggctgcggcacactgaggtgctccctgct
gaggaggagaatgacagcctggggcctgatggtgcccacggagctggtgccatggagtct
gcagccggcgtgctcatcaagctattctgtgtgcataccaaggcactgcaagacgtgcag
atccgcttccagccacagctaaaccctgatgtggtcaccccgctccccacccacactgcc
catgaggactttgcatttggagagtctcggcctgaactgggctctgagggcctgggatca
gcagctcatggctcccagcctgacctccgacgaatcgtggagctgcctgcacctgctgac
ttcctcagtctcagcagtgagaccaagcccaagctgatgacacctgatgccttcatgaca
cccagcgcctccctgcagcagatcactgcatcccctagcagtagtagcagcagcagcagc
agcagcagcagcagcagctctcttacagctgtgtctgccatgagcagcacctcagccgtg
gacccctccttgcccagaccacctgaggagctgaccttgagccccaagctgcagctggat
ggcagtctgacaatgagcagcagcagcggcctacaggcaagcccgcgcagcctcctgcct
ggcctactcccaggcccagccgacaaattgactcccaaggggccagggcaggtgcctact
gctgcctctgcactgtccctggagctgcaagaagtggagcccctggggctaccccaggcc
tctcccagccgcacccgctccccagatgttatctcctcagcttccactgccctgtctcag
gacatccctgagattgcatctgaggccctgtcccggggctttggctcctctgcaccagag
ggtcttgagccagacagtatggcctcagccgcctcagcactacacctgctttccccccgg
ccccgaccagggcctgagcttggcccccagcttggcctggatggaggccctggggacgga
gatcggcatagtaccccttccctcctggaggcagccttgacccaggaagccacgacccct
gacagtcaggtttggcctacagcacctgacatcacccgtgagacctgtagcaccctggca
gaaagtcccaggaatggccttcaggaaaagcacaagagcctggccttccaccgaccacct
tatcacctgctgccgcaacacgacagccaggatgccagtgccgagcaaagtgaccatgat
gatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcccactcca
cggctgcctaccaaggactggaagaccaagggatcccctcggtcctcacccaagctcaag
aggaaaagcaagaaggatgacggggattcagccatgggatcccggctcacagagcaccag
tgctattggcaggtggcagagccacctgaggactggccagcactaatttggcaacagcag
agagagctggcagagctgcggcacagccaagaagaactgctgcagcgtctgtgtacccaa
ctcgaaggcctgcagaacactgtcatgggccatgtagaacgtgccctggagacccggcat
gagcaggaacagcggcggctggagcgggcactggccgaggggcagcagcggggtggtcag
ctgcaggagcagctgacacagcagctgtcccaggcactgtcttcagctgtggctgggcgg
ctagagcgcagcataagggacgagatcaagaagacagttcccccatgtgtctccaggagt
ctggagcctgtggcaggccagctgagcaactcagtggccaccaagctcacagctgtggag
ggcagcatgaaagagaacatctccaagctgctcaagtccaagctcctccctctaccccag
aatttgactgataccatcgcccgagcagctgcagacactttacaggggccaatgcaggct
gcctaccgtgaggccttccagagcgtggtgctgccggccttcgagaagagctgccaggct
atgttccagcagatcaatgatagcttccggctgggcacacaggaatacttgcagcagtta
gaaagtcacatgaagagccggaaggcacgggaacaggaggcaagggagcccgtgctggcc
cagctgcggggcctggtcagtacactgcagagtgccaccgagcagatggcagccactgtg
tctagcagcgttcgggctgaggtgcagcaccagctgcatgtggctgtgggcagcctgcag
gagtccattttagcacaggtacagcgcattgtcaagggtgaagtgagtgtggcgctcaag
gagcagcaggccgccgtcacctccagtatcatgcaggccatgcgctcagccgctggcaca
cctgttccctctgcccaccttgactgccaggcccagcaagcccatatcctgcagctgctg
cagcagggccacctcaatcaggccttccagcaggcactgacagccgctgacctgaatctg
gtgctctatgtgtgtgaaactgtggacccagcccaggtttttgggcagccaccctgccca
ctctcccagcccgtgctcctttccctcatccagcagctggcatccgaccttggcactcga
actgacctcaagctcagctacctggaagaggccgtgatgcacctggaccacagtgatccc
atcactcgggaccacatgggctccgtcatggcccaggtgcgccagaagctctttcagttc
ctacaggctgagccacacaattcacttggcaaagcagcccggcgtctcagcctcatgctg
cacggccttgtgacccccagcctcccttag
DBGET
integrated database retrieval system
