Propithecus coquereli (Coquerel's sifaka): 105825356
Help
Entry
105825356 CDS
T08746
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
105825356 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoq04040
]
105825356 (TRPA1)
Ion channels [BR:
pcoq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105825356 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
Ribosomal_L9_N
Motif
Other DBs
NCBI-GeneID:
105825356
NCBI-ProteinID:
XP_012518560
Ensembl:
ENSPCOG00000026408
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MKRSLRKILRPGEKKEPQDVVYQGVQDDMDDSKESLKVVFEGSACTSQNFIQKQKRLNGR
YDTNASPLHHAAAEGQVELMNMIINDSSCEVLNVMDDYGNTPLHWAAEKNQVESVKFLLS
KGANPNLRNSAMMAALHVAVQAMHNEVVKVLTEHSSTNVDLEGESGNTAVLMACSKDNSE
ALQILFNKGAKSCKPNKWGCFPVHQAAFSGAKKCMEIILKYGEEHGYSREFHINFVNNGK
ASPLHMAVQSGDLEMIKMCLDNGAHIDLMENGRCMALHFAATQGATEIVKLMISSYSGST
NIVNAVDGNQETLLHRASLFDHHELADYLISVGADINSIDCEGRSPLILATASASWNIVN
LLLSKGARVDIKDHYGRNFLHLTVQQPYGLKNLRPEFMQMQHIKELVMDEDNDGCTPLHY
ACREGVPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHAAMGGYTQTMKVILDTNLK
CTDRLDEDGNTALHFAAREGQAKAVGLLLSRDADIVLNKQQASFLHLAFHNKRKEVVLTA
IRSKRWDECLKVFSHCSPSNKCPITEMIEYLPECMKVLLDFCMLHSTEDKSRLDYHIEYN
FKYLQCPSAFTKKVRPTQDAIYEPLTALNAMVQHNRIELLNHPVCKEYLLMKWLAYGFRA
HMMNLGSYCLGLIPMSLLVVNIKPGMAFNSTGIINETSDHSEIKLDTTKSNYFRDINNLT
EWIIYTASIIFVLPLFANIPAFMQWQCGAIAVFFYWINFLLYLQRFETCGIFIVMLEVIL
KTLFRSTVVFVFLFVAFGLSFYVLLNMQDTFSTPWLAIIQTFSMMLGDISYRDAFLEPFL
RNELTYPFLSFVHLIIFTLLVPIVLVNLLIGLAVGDIAEVQKHASLKRIAMQVELHTGLE
KKLPLWFLRKVDQKSTIVYPNKPRSTGRLFNLFCYLFFNQEKRQEMPNADTSLEMEILKQ
KYRLKDLTVLLEKQHELIKLIIQKMEIISEAEDEDNHCSFQDKFKKEQLEQRNSKWNCVL
RAVKAKTHQP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaggaagattctgcgccctggcgagaagaaggagccccaagacgtt
gtctatcagggcgtgcaggacgacatggacgacagcaaggagtcgcttaaggtggttttt
gaaggaagtgcatgtacatcacaaaactttatccagaaacaaaagagattaaatggcaga
tatgatacaaatgcctcccctttgcatcatgctgcagctgaaggtcaagttgagctgatg
aacatgatcatcaatgattcctcttgtgaagtgctgaacgtaatggatgattacgggaat
acccctctgcactgggctgcagaaaaaaaccaggtggaaagtgttaagtttcttctcagc
aaaggagcaaacccaaaccttcgaaacagcgccatgatggcagccctccacgtggctgtg
caggccatgcacaacgaggtggtcaaggtcttgactgagcacagcagtactaatgttgat
ttggaaggagaaagtggaaacacagctgtgctaatggcatgctccaaagataacagtgaa
gcactgcaaattttgtttaataaaggagctaagtcatgtaaaccaaataaatggggatgc
ttccctgttcaccaggctgcattttcaggtgccaaaaaatgcatggaaatcatactgaag
tatggtgaagaacatggatacagccgtgagtttcacattaactttgtgaataatgggaaa
gccagcccactccacatggccgttcaaagtggagacttggaaatgatcaaaatgtgcttg
gacaatggtgcacacatagacctgatggagaatgggaggtgtatggcccttcattttgct
gccacccagggagccactgagattgtcaaactgatgatatcatcctattctggtagcacc
aatatcgttaatgcagttgatggaaatcaggagaccctgcttcacagagcttcattattt
gatcaccatgaactagcagactacttaatttcagtgggagcagatattaacagtatcgat
tgtgaaggacgctctccacttatactagcaactgcttctgcatcttggaatatcgtaaat
ttgctactctctaaaggtgcccgtgtagacataaaagatcattatgggcgtaattttttg
catttgactgtacagcaaccttatggattaaaaaatttgcgacctgagtttatgcagatg
caacatattaaagagctggtaatggatgaagacaatgatgggtgtactcctctacattac
gcatgtagagagggggtccctgtctctgtaaataacctacttgactttaatgtgtccatc
cattccaaaagcaaagataagaaatcacccctgcattttgcagccagttatgggcgtatc
aatacctgtcagaggctcctacaagacatcagtgataccaggcttttgaatgaaggtgat
cttcatggaatgactcctctccacctggcagcaaaaaacggacatgataaagtagttcaa
cttcttctgaaaaaaggtgcattatttctcagtgaccacaatggctggactgctttgcac
cacgcggccatgggcgggtacacccagaccatgaaggtcattcttgacactaatttgaag
tgcacagatcggctagatgaagatgggaacacggcgcttcactttgctgccagggaaggc
caggccaaagctgtcgggctgctcctgagccgcgatgctgacatagtcctgaacaagcag
caggcctcgtttttgcacctcgcattccacaataagaggaaggaggtggttcttacagcc
atcaggagcaaaagatgggatgagtgtcttaaagtttttagtcattgttctccaagcaat
aaatgtccaatcacggaaatgatagaataccttcctgaatgcatgaaagttcttttagat
ttctgcatgttgcattccacagaggataagtcccgtctagactaccatattgaatataat
ttcaaatatcttcaatgtccatcagcattcaccaaaaaagtaagacctacacaggatgct
atatatgagcctcttacagccctaaatgcaatggtacaacataaccgcatagagcttctc
aatcatcctgtgtgtaaagaatacttacttatgaaatggttggcttatggatttagagcc
cacatgatgaacctaggatcttactgtcttggtctcatacctatgagtcttcttgttgtc
aatataaagccaggaatggctttcaactcaactggaatcatcaatgaaactagtgaccat
tcagaaattaaattagacaccacgaaaagtaattactttcgggatattaataatctcact
gaatggattatctacacagcaagcatcatttttgtgctgcccttgtttgctaacatacca
gcttttatgcagtggcaatgtggagcgattgctgtattcttctactggattaacttcttg
ttgtatcttcaaagatttgaaacttgtggaattttcattgttatgttggaggtaatttta
aaaactctgtttagatctacagttgtatttgtcttcctttttgtggcttttggactcagc
ttttatgtcctcttgaatatgcaggacaccttcagcactccgtggctagccataatccag
accttcagcatgatgctgggagacatcagttaccgggatgccttcctagaaccatttttg
agaaacgaattgacatatccatttctgtcctttgtgcaccttattatcttcacgctcctt
gtcccaattgtcctcgtgaatttacttattggtttggcagttggcgacatcgctgaggtc
cagaaacatgcatcactgaagagaatcgctatgcaggtggaacttcataccggcttggag
aagaagctgccactctggttcctacgcaaagtggatcagaaatccaccattgtctatccc
aacaaacccagatctactgggaggttatttaatttattttgttatctgtttttcaaccaa
gaaaaaagacaagaaatgccaaatgccgatacatctttggaaatggaaatattgaaacag
aaataccggctgaaggatctcactgttcttctggaaaaacagcatgagctcattaaactc
atcattcagaaaatggagatcatctctgaggcagaggatgaagataaccattgttctttt
caagacaagtttaagaaagagcagctggaacaaaggaatagcaaatggaattgtgtgttg
agagcagtaaaggcaaaaacacaccagccctag
DBGET
integrated database retrieval system
