Propithecus coquereli (Coquerel's sifaka): 105825521
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Entry
105825521 CDS
T08746
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105825521 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoq03032
]
105825521 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105825521 (TOPBP1)
DNA replication proteins [BR:
pcoq03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105825521 (TOPBP1)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105825521 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
105825521
NCBI-ProteinID:
XP_012518815
Ensembl:
ENSPCOG00000022789
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MSRNDTEPFFVKFLKSSDNSECFFKALESIKEFQSEEYLQVITEEEALKIKENDRSLYIC
DPFSGTAFDHLKKLGCRIVGPQVVIFCMQHQRCVPRAEHPVYNMVMSDVTISCTSVEKEK
RDEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWINTLWEKSQ
EKKITRYTDINMEDFKCPIFLGCIICVTGLCGADRKAVQQLTVKHGGQYTGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVDKGFCQDEFIYKTEPRPATKTMPDTSTPA
GQINTIDSRTLSDVSHISNINASCINESICNSANSKLEPTLENLENLDVSSFQAPEDLLD
GCRIYLCGFSGRKLDKLRRLINSGGGIRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH
VVGAKWLLECFTKGYMLPEEPYIHANYQPVEIPVSDQPESKVVVLKKKNSGFSNEKHEQA
DEELLSQYVNNSSTVVEAKKSEAEKSEVGPFNDSTHVETFNDSTYILPEENRSSVSHCLP
DASTITEEGLFSQKSFLVLGFSNEHESTIASIIKENAGKIVSLLSRTVADYAVVPLLGCE
VEATVGEVVTNTWLVTCIDYQTLMDPKSNPLFTPVPVMTGVTPLEDCVISFSQCAGAEKD
SLIFLAKCLGASVQEFFVRKANTKKGMFASTHLVLKEPGGSKYEASKKWNLPAVTIAWLL
ETARMGKKADESHFLIENSPKEEQSLETEITNGMNLNPDTPERPGIHLETHRKTAVTPLD
MNRFQSKAFHAVISQHARRASASPATGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDA
LAALETPKGHSQQKRKLSTPLSEVIVRNLKLALANSSRNAVAVSASPQLKDTRSEKEEAP
KPLHQVVVCVSKKLSKKQSELNGIAASLGADYSIHSPLTQTLEMRENFQKQLQEIMSATS
IVKPQGQRTSLSKSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQI
IWDDPTAREERARLASNLQWPSCPTQYSELQVDTKKLEDSPFQEPLGDSEIAKQAVCDPG
DRCVTEAQKHPISEELEVPIKDNHLIPTPQAPSIAFPLANPPVAPHPREKIITTEEIHEE
LKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQSFDPNCTHIVVGQPLRNEKYLASVA
AGKWVLHRSYLEACRTASRFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQ
RQESGVVEGAFCGWKVILHVGQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFNK
LKPDDSGVNIAEAAAQNVYCLKTEYIADYLVQETPPQVENYCLPEAVAFLQNDKEPEAGL
SQKRKAPTEKNKIKRPRVH
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacacagaaccgttttttgtgaagtttttaaagtcttcagacaactct
gaatgtttttttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
gttattacagaagaagaggcattgaagataaaggagaatgacagatcactttatatctgt
gacccttttagtggcactgcctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcagcaccaacgatgtgtcccaagagccgaacatccg
gtttataatatggttatgtctgatgtaaccatatcttgtacaagtgtggaaaaagaaaaa
agggatgaagttcataaatacgtacaaatgatgggtggtcgagtatacagagaccttaat
gtatcagtaactcacctcattgcaggagaagttggtagcaaaaagtatttagtggctgca
aacctaaagaaacctattttgcttccctcttggataaacacactttgggagaagtcacaa
gagaaaaaaataactagatatactgatatcaacatggaagacttcaagtgccctattttt
cttggttgcatcatctgtgtgactggcttgtgtggtgcagacaggaaggcagttcagcag
ctgacagttaagcatggaggtcaatacacgggacaattgaaaatgaatgaatgcacgcac
ctcattgtgcaagaaccaaaaggtcagaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccacacaatggttttttgacagtgttgacaaaggtttttgtcaggatgaattc
atatacaagacagaaccaagaccagcaaccaagactatgcctgatacttcaactcctgct
ggccagatcaacacaattgatagtcgtactctttcagatgtcagccatatttccaacata
aatgcgagttgcataaatgaatcaatatgtaattccgctaatagcaaattggagcctaca
cttgaaaatctagaaaatctggatgtcagttcatttcaagcacctgaagatttattagat
ggttgtcggatatatctttgtggttttagtggcagaaagcttgacaaactgagaaggctt
attaacagtggaggtggaattcgttttaatcagcttaatgaagatgtaactcatgttatt
gtgggagattatgatgatgaactgaagcagttttggaataaatcagcccacaggcctcat
gtagtgggagcaaagtggttgctagagtgtttcactaaaggttatatgcttcctgaagaa
ccatatatccatgccaattaccagccagtggaaattccagtttcagatcaacctgaaagt
aaagtggtggttttaaaaaagaagaacagcggcttctctaatgaaaagcatgagcaagct
gatgaagaactgctctctcaatatgtcaataatagttccacagtagttgaagctaagaag
tctgaagctgagaagtctgaagttgggccctttaatgattctactcatgttgagaccttt
aatgattctacttacattttgccagaagaaaaccgatcttctgttagtcattgtctccct
gatgcttctacaattaccgaagagggcttatttagccaaaagagtttccttgttttgggt
tttagtaatgaacatgaatctactattgcaagcatcataaaagaaaatgctggaaaaatc
gtatcccttctgagcagaactgttgctgattatgccgtggttcccctgctggggtgtgaa
gtagaagcaactgtgggagaagtcgtcacaaatacatggctggttacgtgtatagactat
cagactttaatggatccaaagtcgaatcctctcttcacaccagtcccagtgatgacagga
gtgactcctttagaagattgtgttatttccttcagccagtgtgctggagcagaaaaagat
tctttgatattcttagcaaagtgccttggagcgagtgttcaagaattctttgttcgaaaa
gccaatacaaaaaaaggaatgtttgccagtacacatcttgtattgaaagagccaggtggt
tctaaatatgaagcttcaaagaagtggaatttaccggcagtcactatagcttggctgttg
gagaccgctagaatgggaaagaaagcagatgaaagccattttctgattgaaaattcacct
aaagaagaacaaagtctggaaactgaaataacaaatgggatgaatctaaatccagatact
ccagagcgtcctggcatacacctggaaactcacagaaaaacagctgttacaccgttagat
atgaaccgctttcagagtaaagctttccatgctgtgatctcacaacatgccagacgagct
tcagcctccccagcaacaggacagccacttcagaaggagccctcattacaccttgataca
ccatcaaaatttctctccaaggacaagctcttcaagccttcttttgatgtgaaggatgca
cttgcagccttggaaactccaaaaggtcatagccaacagaaaaggaaactgagtacacca
ctctcagaagtcattgtgagaaacttgaagcttgctttggcaaatagctctcgaaatgct
gttgctgtttctgccagccctcaactgaaggacacccggtcagaaaaggaagaagctcca
aagccacttcaccaggtagtggtatgtgttagtaaaaaactcagtaagaagcagagtgaa
ctaaatgggattgcagcctctctaggagcagattacagtattcatagccctctgacacag
accttggagatgagagagaactttcaaaagcagttacaggagatcatgtctgcaacatca
atagtgaaaccccaagggcagaggacttccctttcaaaaagtggttgtaacagtgcttct
tccacccctgacagcactcgctctgctcgcagtggacgaagtagagtcctagaggcactg
aggcagtctcgtcaaacagtacccgatgtcaacacagagccctcccaaaacgaacagatc
atttgggatgaccctacagcaagggaagagagagcaaggcttgcaagcaatttgcagtgg
cctagctgtcccacacaatactctgagcttcaggttgatactaaaaaattggaagattct
cctttccaggagcctttgggtgattcagaaattgccaaacaggctgtctgtgaccctgga
gacagatgtgtgactgaagcccaaaaacacccaatctctgaagaactggaagtgccaata
aaagacaaccaccttatccctactcctcaagcccccagtattgccttccctctcgccaac
ccacctgtggctccacaccctagagaaaagattataacaacagaggagattcatgaagaa
ttaaaaaaacagtacatatttcagttgtcatctctgaatcctcaagaacgtatcgattat
tgtcatctgattgaaaaactgggtggattagtgatagaaaagcagagttttgatcccaac
tgtacacacattgttgtgggacagcctcttcggaatgagaagtatttagcctccgtggca
gctgggaagtgggtgcttcatcgctcctaccttgaagcatgcaggactgctagccgcttc
gtgcaggaagaagactatgaatggggaagtagttccatacttgatgttttgactggaatc
aacgtacagcaacgaagactagcacttgcagcaatgagatggaggaaaaaaatccagcaa
agacaagaatcgggtgttgttgagggggcattttgcgggtggaaggttattttacatgtt
ggtcaatctcgagaagcagggttcaaacgccttcttcagtcaggaggagcaaaggtgcta
cctgggcattctgtacctttattcaaagaagccacacatcttttttctgactttaataag
ctgaaaccagatgactcaggagttaatatagcagaagccgctgcccagaatgtgtactgc
ttgaaaacagaatacattgctgattatctcgtgcaggaaacccctcctcaagtagaaaat
tactgtctaccagaagctgttgcatttcttcagaacgataaggaacctgaggccggatta
tcacaaaagaggaaagctcctacagagaaaaataagatcaaacgacctagggtacactga
DBGET
integrated database retrieval system
