Poriferisphaera corsica: KS4_16910
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Entry
KS4_16910 CDS
T06996
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS4_16910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcor03019
]
KS4_16910 (recQ)
03400 DNA repair and recombination proteins [BR:
pcor03400
]
KS4_16910 (recQ)
Enzymes [BR:
pcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS4_16910 (recQ)
Messenger RNA biogenesis [BR:
pcor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KS4_16910 (recQ)
DNA repair and recombination proteins [BR:
pcor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KS4_16910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Rhodanese
AAA_22
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QDU33636
UniProt:
A0A517YTT2
LinkDB
All DBs
Position
1964467..1966344
Genome browser
AA seq
625 aa
AA seq
DB search
MMEIFEQGNAQIADNNTLDLATTLQDTFGHAQFRPLQQEIIQCLLKGNDTLVIMPTGGGK
SLCFQLPALHLPHTTLVISPLIALMQNQVDALQASGIAATCINSSLEPAEASERERAAIR
GDYKLVYLSPERLMSSAGYRLLTKMPVNLIAIDEAHCISEWGHDFRPEYRMLGDLRIQHP
DRFAKTPIVALTATATPRVAEDIQRQLHLINPQIFHTSFERPNLRYEIRPKHEMMKQVLE
YLEQNQDHEGIIYCQSRARCEQIAEQLQRRGISALPYHAGLENNVRKQNQHDFIYGSARI
IVATIAFGMGIDKPDVRFVFHADLPRHIEGYYQETGRAGRDGMIADCILFYSAADRTKVE
YFIEQKEDPEQRDHAYWQLNKMIRYAHTTDCRCIPLLDYFGEEHSGDCGHCDNCLNPPKL
IEATEDARKLLSAIARTDQRYGLSHIIDILRGSNAQKIIDRNHHNLSVHGIGRDKPKSHW
LNVAETLLRDGHLGMTIDEFRTTHLTESSPSILRGELPITVAISRAISTREDITVKRTAN
EPTRPVDASLFQALRELRKQLAQEKGVPPYVIFGDISLKHMAADYPINDFAFLQIPGVGQ
TKLQRYGEAFMDIIKQFAPQAASCD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatggagattttcgagcagggaaacgctcaaatagccgataataatacgcttgaccta
gcgacaacgctgcaggatacattcggacacgcccagttccggcctctgcagcaggaaatt
attcaatgccttctcaaaggtaacgatacgctcgttatcatgccgacaggtggtggtaaa
tcactctgcttccaactcccagccctccacctgcctcataccacactggtcatatcccca
ctcattgctcttatgcaaaatcaggttgatgctcttcaagctagcggtatcgccgcaacc
tgtatcaactcatcactggaaccagccgaagcttctgaacgtgaacgagctgcaattcgc
ggtgattacaagctcgtctatctttcccccgagcgtcttatgtcttcagcaggatatcga
ctgctcactaaaatgcccgtcaacctcattgcgattgacgaagcccattgtatttctgaa
tggggacatgatttccgccctgaatatcgcatgctcggtgacttgcgcattcagcatcct
gatcgtttcgctaaaacgcccatcgttgcgctcaccgccaccgctacgccgcgtgttgct
gaagatatccaacgtcaactccatctaatcaaccctcaaatattccataccagtttcgaa
cgacccaacttacgttatgagattcgtcctaagcatgaaatgatgaaacaggttctggag
tacctggagcagaatcaggatcatgaaggcatcatttactgtcagtctcgtgcgcgttgc
gagcagatcgctgaacaacttcaacggcgtggtatctcagccctgccttaccatgcaggc
cttgaaaataacgttcggaaacaaaaccagcacgattttatttacggctcggcccgaata
attgttgccaccatcgctttcggaatggggatcgataagccagacgtacgatttgtattc
cacgcagatcttccccgccatattgaaggttattatcaggaaacaggtagagcgggccgc
gatggcatgatcgctgactgtatcctcttctactctgctgcagatcgtaccaaagtcgaa
tacttcatcgagcaaaaagaagatcccgagcagcgtgatcatgcctattggcaactcaac
aaaatgattcggtacgctcacacaactgattgtcgttgcattcctctacttgattacttc
ggcgaggagcattctggtgattgcggccactgtgataactgcctcaaccctccaaagcta
attgaagccactgaggacgctcgtaagctcctctccgctatcgcacgcaccgaccagcga
tacggcctctctcatattatcgacatcctgcgcggctctaatgcccagaaaatcatcgac
cgcaatcaccacaatctctcagttcatggtattgggcgtgataaaccaaaatcgcattgg
cttaatgtcgccgaaaccctactgcgtgacgggcatcttggcatgaccattgacgaattc
cgcacgacgcatctcaccgaatctagtccatcgattcttcgaggcgagctccccatcacc
gtggcaatcagccgcgccattagcacgcgagaagatatcactgtaaaacgcacagccaat
gagccaacacggcctgtcgacgcttcactcttccaagcactccgtgaacttcgcaagcag
ttagctcaagagaagggtgtccctccttacgtcatatttggcgatatctcactcaaacac
atggccgctgattaccccatcaatgacttcgcttttcttcaaatccctggtgttggtcag
acaaaactacagcggtacggtgaagccttcatggatattatcaagcaatttgccccgcaa
gccgcctcttgcgactaa
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