Poriferisphaera corsica: KS4_28030
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Entry
KS4_28030 CDS
T06996
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KS4_28030 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcor03400
]
KS4_28030 (priA)
Enzymes [BR:
pcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS4_28030 (priA)
DNA repair and recombination proteins [BR:
pcor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KS4_28030 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Zn_ribbon_6
nSTAND6
AAA_30
ADDB_N
TrwB_AAD_bind
DUF87
zf-CHY
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QDU34729
UniProt:
A0A517YWY6
LinkDB
All DBs
Position
complement(3230360..3232834)
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AA seq
824 aa
AA seq
DB search
MSETLFGNDLGDGTKKRAAKVDASGGYVVVALERGGDAAGGGLTYAVGKEFKEGDGLCEG
DRVMVPLGRANKKVWGYVVGVLGEEDLDAKLKGKVKGVIAKDEGRIRLTADLVELAKWIS
VYYCSPLGMVFAAMLPAAVKQKTGTKQVQVVRLSDAWLKLNPEEQHKKKLTKLQKAIVSK
AGELSCREDTPQVGTRGLDRCADSNGERNKDDDTQQGEDWVEVKELAYAAGAKTSGPVKK
LVQMGVLEVKLQSMVRSRGDLVQQAREEALAGNFGVVKPSLSQCQSDALEQLTGKLDEFA
VNVLHGVTGSGKTEVYLRLIEEVLKKDERAGVIILVPEIALTPQTVGRFVGRFDGVAVLH
SGLTAAQRHEQWRRIYEGEAHIVVGARSAVFAPVRDLKLILVDEEHEGSYKQDQVPRYHA
RDVAVKRGQLCGSNVVLGSATPSVESFYNAVKRGVYGVVSMAERVPGMKLPRVEIVDMVE
ERRERRGIHLLSQRLEKGIEAVVRDGGQVMLLLNRRGYANYIACPDQKCGWLMSCKYCDV
SMVYHKHRQVVGGVVKCHHCGAEQLLPAICPDCGKRVTTFGLGTQRVEEELSKKFPDFTA
VRMDSDTMRTGQDYQETLDGFRRGDVDILLGTQMIAKGLDFPKVRLVGVISGDTSLNMPD
FRAGERTFQLIAQVCGRAGRSEKPGFAVVQTFNGDDPIIQMAAEHDYVAFAKREIEIREE
VGHPPVRRMVRVVVRNKNHGKGEEHARELFEQLVRCNDTIGAGVNVLQQMPCSISRIAEY
YRFEIELIADKPGQLQKLMGVMRGNKLLLSDMHTAVDVDPVVML
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagactttgtttggcaatgatttgggtgatgggacgaagaagcgggctgcgaaa
gttgatgcgagtggtggttatgttgtggttgcactggagcggggtggtgatgcggcgggg
ggcgggctgacgtatgcagtggggaaagaatttaaggagggtgatgggttatgtgagggg
gatcgggtgatggtgcctttaggaagggcgaataagaaggtgtggggttatgtggtgggc
gtgctgggtgaagaagatttggatgcgaaacttaaggggaaggtgaagggagtgattgcg
aaggatgagggaaggatacggttgacggcggatttggtggagctggcgaagtggatcagt
gtttattattgcagtcctttggggatggtttttgcggcgatgctgcctgcggcagtgaag
cagaagacggggacgaagcaggtgcaggtggtgcggctgagtgatgcgtggttgaagctt
aatcctgaagagcagcataagaaaaagttaacgaaattgcagaaggcgattgtgagtaag
gcgggggaattgagttgcagagaagataccccacaggttggaacccgtgggcttgatcga
tgcgcggattcaaatggtgagcgtaataaggatgatgatacgcaacagggggaggattgg
gttgaggtgaaggagttggcttatgcggcgggggcgaagacgagtgggccggtgaagaag
ctggtgcagatgggggtgcttgaggttaaattgcagtcgatggttagatcgcgaggggat
ttggtgcagcaggcgagggaggaggcgctggcgggcaattttggtgttgttaaaccatcg
cttagtcagtgtcagtcggatgcactggagcagttgacgggtaagttggatgagtttgcg
gtgaacgttttgcatggcgtgacggggagcgggaagacggaagtttatttgcggttgatt
gaagaagttttgaagaaggatgaaagggcgggagtcatcattcttgtgccagagattgcg
ctgacgccacagacggtgggacggtttgtggggcggtttgatggtgtggcagtgctgcat
tcaggtttgacggcggcgcagcggcatgagcagtggcggcggatttatgagggagaggct
catattgtggtgggtgcgcggagtgcggtgtttgcgccggtgcgtgatttgaagttgata
ttggtagatgaggagcatgaggggagttacaagcaggatcaggtgccgcgataccatgcg
cgggacgttgcggtgaaacgggggcaattgtgcgggtctaatgtggtattaggcagcgcg
acgccgagtgttgagagtttttataatgcggtgaaacgtggggtgtatggtgtggtgagt
atggcagagcgtgttccagggatgaagctgccgcgggttgagattgtggatatggtggag
gagcgaagagagcggcgggggattcatctgctgagtcagcgattggagaagggaattgaa
gcggtggtgagggatggggggcaggtgatgttgcttttgaatcgaagggggtatgcgaat
tatatcgcgtgcccggatcagaagtgcggttggctgatgagttgcaagtattgtgatgta
tcgatggtctatcacaagcataggcaggttgttgggggagtggtgaagtgccatcattgt
ggggcagagcagctactcccggcgatatgcccggattgtgggaagcgggtgacaacgttt
gggcttggaacgcagcgggttgaggaagagttgagcaaaaaatttccagactttacagcg
gtccggatggattcggacacgatgcggacagggcaggattaccaggagactttagacggg
ttcaggcgaggggatgtggatattttgcttggaacgcagatgattgcgaagggtttggat
tttccgaaggtgagattagtgggtgtgattagtggtgatacatcgttgaacatgccagac
tttcgtgcgggggaacggacgtttcagttgattgcgcaggtttgtgggagagcagggcgg
agtgagaagccagggtttgcggtggtgcagacgtttaatggggatgatccgattattcag
atggctgcggagcatgattatgttgcttttgctaagcgcgagatagagatcagggaagag
gtggggcatccgccggtgaggcgaatggtgcgggttgtggtgaggaacaaaaatcatggg
aagggtgaggagcatgcgagagagctgtttgaacagttggtgagatgtaatgatacgatt
ggggctggtgtgaatgtgttgcagcagatgccatgttctatttcacggatagctgagtat
taccggtttgaaatagaattgattgcggataagccggggcagttgcagaagttgatgggt
gtgatgcgggggaataagttgttgctttcagatatgcatacggcggtggatgttgatccg
gtggtgatgctgtag
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