Poriferisphaera corsica: KS4_28900
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Entry
KS4_28900 CDS
T06996
Symbol
groL_3
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS4_28900 (groL_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcor03019
]
KS4_28900 (groL_3)
03110 Chaperones and folding catalysts [BR:
pcor03110
]
KS4_28900 (groL_3)
03029 Mitochondrial biogenesis [BR:
pcor03029
]
KS4_28900 (groL_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcor04147
]
KS4_28900 (groL_3)
Enzymes [BR:
pcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KS4_28900 (groL_3)
Messenger RNA biogenesis [BR:
pcor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KS4_28900 (groL_3)
Chaperones and folding catalysts [BR:
pcor03110
]
Heat shock proteins
HSP60 / Chaperonin
KS4_28900 (groL_3)
Mitochondrial biogenesis [BR:
pcor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KS4_28900 (groL_3)
Exosome [BR:
pcor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KS4_28900 (groL_3)
Exosomal proteins of other body fluids (saliva and urine)
KS4_28900 (groL_3)
Exosomal proteins of breast cancer cells
KS4_28900 (groL_3)
Exosomal proteins of colorectal cancer cells
KS4_28900 (groL_3)
Exosomal proteins of bladder cancer cells
KS4_28900 (groL_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
MT0933_antitox
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QDU34814
UniProt:
A0A517YX60
LinkDB
All DBs
Position
3327665..3329290
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKSIKFDNEAREAIRRGVSKLAKAVKTTLGPSGRVVVLEKSFGSPTVTKDGVTVAKEI
ELEDALENIGAQMVKEVASKSSKDAGDGTTTATVYAEAIFTEGLKNITAGANANQIKRGI
DKAVDALVENLQKQSKKVANSEEVAQVGTCSANQDAAIGQIIADAMDKVGKDGVITVEEG
KSLETYVDLVEGMQFDKGYLSPHFVTDPKSMEVEMEDAFVIIHEKKISSAKDLVPILGKI
AEAGKPVLIIAEDIDGEALATLVVNRLRGVLRAAAVKAPGFGDRRKEMLNDIATLTGGRA
IMEELGIDIEKLELSDLGRVKKVIITKDETTLIEGAGKSSDIKGRIEMIKSQIDATSSDY
DREKLQERLAKLSGGVAQINVGAATESEMKEKKARVEDAMHACRAAVQEGILPGGGTAIL
RARKALDTIEGLIGDEAIGVDIVRRAVVAPVKQIAENAGHDGSVICEKVIAGKQKEGFNA
LTGEFGDMIKMGVLVPTKVERAALQNAASIAGLLLTTDAVITEIKDDKAAAGAPGMDDMG
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaagtcaatcaaatttgataacgaagcacgcgaagcgattcgtcgcggcgtg
tctaagcttgcaaaggctgttaaaacaacactcggcccatctggccgcgtggttgtcttg
gaaaaatccttcggctcaccaaccgtcaccaaggacggcgtaaccgtagcgaaggaaatc
gaactcgaagacgcgctagaaaatatcggcgctcagatggttaaggaagttgcttccaag
tcatcgaaagatgctggcgacggtacaacgactgcgaccgtttatgctgaagcgatcttc
accgaaggcctgaagaatatcactgctggtgcgaatgcaaaccagatcaaacgcggcatc
gacaaagctgttgacgctttggtcgaaaaccttcagaaacaatccaagaaggttgcgaac
tctgaagaagtcgcacaggttggtacatgttctgcgaaccaagatgctgctatcggccag
attattgctgacgcgatggacaaggttggtaaagatggcgtgatcacagttgaagaaggc
aagagccttgaaacttacgttgatctcgttgaaggtatgcagttcgacaagggttacctg
tcgccacacttcgtgactgatccgaagtcgatggaagtggagatggaagatgctttcgtg
atcattcacgagaagaagatttcttctgctaaagatctcgtcccaattctcggcaagatc
gctgaagctggcaagccagttttgatcattgctgaagacattgatggcgaagcgctcgca
acattggtcgtgaaccgtttgcgtggcgtattgcgtgcggctgcagttaaagctccgggc
tttggtgatcgtcgtaaggaaatgttgaatgacattgcgacgctaacaggcggccgcgcg
attatggaagagcttggcattgatattgaaaagcttgagctttcagatcttggccgtgta
aagaaggtcatcatcacgaaggatgagacgactttgatcgaaggtgctggcaagtcttcg
gacataaagggccgcatcgaaatgatcaaatcgcagattgatgcgactagctctgactat
gatcgtgagaaactgcaagaacgtttggcgaagctgtcaggcggcgtggctcagatcaat
gttggtgctgcgactgagtctgaaatgaaagagaagaaggcgcgcgttgaagatgcgatg
catgcttgccgcgctgcggttcaggaaggcatcttgccgggcggtggtaccgcgattctg
cgtgcacgcaaagcactcgatacgatcgaaggtttgatcggtgacgaagcgatcggcgtt
gacatcgtgcgtcgtgcggttgttgctcctgtgaaacagattgcagaaaacgctggccat
gacggttcagtgatctgtgagaaggttattgcgggcaagcagaaggaagggtttaatgct
ctgaccggcgagttcggcgatatgatcaagatgggtgttctcgttccaaccaaggttgag
cgtgcagcacttcagaatgctgcctcaatcgcaggtctgctactgaccaccgacgcggtg
atcacagagatcaaggacgacaaggctgcggctggcgcaccaggcatggatgacatgggt
tactaa
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