Poriferisphaera corsica: KS4_34540
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Entry
KS4_34540 CDS
T06996
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pcor
Poriferisphaera corsica
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcor03016
]
KS4_34540
Enzymes [BR:
pcor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KS4_34540
Transfer RNA biogenesis [BR:
pcor03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KS4_34540
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GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Cnd1
Motif
Other DBs
NCBI-ProteinID:
QDU35373
UniProt:
A0A517YYR7
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All DBs
Position
complement(3980154..3980747)
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AA seq
197 aa
AA seq
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MTRLFIAIPIELSAEAREVYSSLAALDLMVRMPSLENLHLTLRFIGEVPNALIEPIGDTL
AELHDEYRFPSRCMQFESVSRFPTSRRKPARVVFLTLDEASEHYILEVSEKITSALEEMS
PSIERLDRNVVPHLTLARIKDQHKAEKKVEEIIHRFSDRDLGEVQANRIELIASSLTGAG
AFYTTKHEIELVSPHRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtctatttattgcaataccaattgaattatctgcggaagcccgagaagtatac
agcagtcttgcagctttagatttaatggtcagaatgccctcgcttgaaaatttacactta
acattacggtttattggtgaagtgccaaatgcactaattgaaccgattggtgatacgctt
gctgagttgcatgatgaatatcgtttcccatcaagatgtatgcaattcgaatcggtatca
cgatttcctacatcaaggcgtaaacccgcgcgtgtagtttttttaacgctagacgaggcg
tcagagcattatatcttagaggtctcagagaagatcacatcagcgcttgaagaaatgtcg
ccatcaatcgaacggctagatcggaacgttgttcctcatctcacacttgctcgcattaaa
gatcaacacaaagcggagaaaaaggtcgaagaaattatacatcgatttagtgatcgtgat
cttggcgaagtgcaagcaaaccgtattgaactgattgcttcttcgctcacaggtgctggc
gcgttctatacgacaaaacatgaaattgagttggtgtcaccacatcgttcctaa
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