Poriferisphaera corsica: KS4_36030
Help
Entry
KS4_36030 CDS
T06996
Symbol
vnfA
Name
(GenBank) Nitrogen fixation protein VnfA
KO
K02584
Nif-specific regulatory protein
Organism
pcor
Poriferisphaera corsica
Pathway
pcor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KS4_36030 (vnfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcor03000
]
KS4_36030 (vnfA)
Transcription factors [BR:
pcor03000
]
Prokaryotic type
Helix-turn-helix
Other families
KS4_36030 (vnfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
AAA_2
Parvo_NS1
HTH_30
AAA_19
MCM
Motif
Other DBs
NCBI-ProteinID:
QDU35520
UniProt:
A0A517YZ61
LinkDB
All DBs
Position
4159907..4161502
Genome browser
AA seq
531 aa
AA seq
DB search
MSSNDQELVTLTEITQILSDGLELKQVFQRAIALLSDRLHIHRASLVLLDNSTNQLNIFA
SVGLTAEEQRRGQYAVGEGVTGQVLASGQIAIIQDISKHPDFLDRTGSRTNSTNSDEIIS
FICLPIKDGNDYVGTMSIDIPYQTEKILEQTTQLLNVIAGMFSQTIRIHHLVQLEKEQWA
TENKQLRDSLHSKYRFGNIIGSSPAMLDVLATIGQVSSSRATVLLLGETGCGKELIAKAI
HYNSPRKDEPLIRVNCGALSPQLLESELYGHIKGAFTGAVRDKIGRFEAANGGTIFLDEI
GTLDAQMQVKLLRVLQERELEKVGDHKTIKIDVRVIAATNLDLEEEVRKGNFREDLYYRL
NVVTVSLPPLRNRRDDIPKLIDHFLDTYNKENNRNLSRMNRDVLNTLLRYPWPGNVRELE
NAIERATVLSSSDEFTLELLPLQIRMYAQQTRGESSNESVEALASKLAELGIKQYSIYEG
QIYDLVVHEVEKQLIREALGYNDGTKTRTADFLGINRNTLNKKVKDFNITN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaatgaccaagaattagtcacattgactgaaatcactcaaattttaagtgat
ggactagaattgaagcaggttttccagcgagctatcgcgttactctccgataggctgcac
atacatcgagcctcacttgttctattagacaactcgacaaaccagctaaatatcttcgct
tcggtcggcttaacggctgaagaacaacgtcgaggacaatacgctgtcggagaaggtgtc
accgggcaggtactcgcaagcggccaaatcgccatcattcaagatatttccaaacaccca
gacttcctcgacagaaccggcagccgcacaaacagtaccaactcagacgaaatcatctca
ttcatctgcttacctataaaagatggcaacgactatgtcggtacgatgagtattgatatt
ccctaccaaacagagaagatactcgaacaaacgacacagctactgaatgtaatcgctgga
atgttctcacagacgatccgcatacaccaccttgttcaactcgaaaaagaacaatgggca
accgaaaacaaacagctacgcgatagccttcacagtaaatacaggtttggcaatatcatc
ggctccagcccagcgatgctagatgtactcgcaacaattggacaagtttcatcatcacgc
gcaactgttctccttctcggtgaaaccggctgcggcaaagagctaatcgccaaagcaatt
cattacaactcaccacgtaaagacgaacccttgatccgcgttaattgtggcgcactatca
ccacaactcttagaatccgaattgtacggccatatcaaaggtgcattcaccggagcggta
cgtgacaaaattggccgcttcgaggctgcaaacggtggcacaatctttcttgatgaaatt
ggcacactcgacgctcagatgcaagtcaaactcctgcgtgtactacaagaacgcgaacta
gaaaaagtaggtgaccacaaaaccatcaagatcgatgttcgcgtcatagccgcaacgaat
ctggatctagaagaagaagtacgcaaaggcaatttccgtgaagatctttattaccgcctc
aatgtcgttaccgtcagtctccctcctctacgtaacagacgtgatgatataccaaaactc
attgaccacttcctcgatacctacaacaaagagaacaatcgtaatctctcccgtatgaat
cgtgatgtcctgaacacattactacgatacccatggcctggaaacgtacgtgaacttgag
aatgctatcgaacgagcgactgttctttcttccagtgatgaattcacactcgaattacta
ccgctacaaatacgaatgtacgcacagcaaactcgaggcgaaagctcaaacgaatctgta
gaagcacttgcctctaaactcgcagagctaggtatcaaacaatacagtatttatgaaggc
caaatttacgacttagttgtccatgaggtcgagaaacaacttatccgtgaagccctcgga
tacaatgatgggaccaaaacgcgcaccgcggattttcttggcatcaatcgcaatacactc
aacaaaaaagtcaaagactttaacatcaccaattaa
DBGET
integrated database retrieval system