Polynucleobacter corsicus: C2747_01135
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Entry
C2747_01135 CDS
T08334
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pcos
Polynucleobacter corsicus
Brite
KEGG Orthology (KO) [BR:
pcos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcos03016
]
C2747_01135
Enzymes [BR:
pcos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2747_01135
Transfer RNA biogenesis [BR:
pcos03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2747_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Gluconate_2-dh3
Motif
Other DBs
NCBI-ProteinID:
QWE18879
LinkDB
All DBs
Position
206100..208088
Genome browser
AA seq
662 aa
AA seq
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MHLLYEEGGDIKVATVQSASGAGDAESWQATSLSGKKIKLKAKEVWLRFEKPEPQALMDE
ASTLSKEIDLQFLWDCAPDEEFGLVDVAQEYFGAQASVAQQTALAIALQGAPVFFRRKGR
GRFQRAPLEQLQAGLAALERKQKELEQQTAWQQELVAGVFPETLKSQAHQLLFSPDKNTS
AYKALIAACTESGESPAQLMIRCGAIDSPLQYHQGMFLKAHFPQGSEHDPSLAVDQAALD
AAISELPIAEVTAFSIDDSGTTEIDDALSATTLEGGGHRIGIHIAAPGLVIAKDDALDKV
ARTRMSTVYFPGDKITMLPDTVISQFSLDEGAARPALSIYVDIDSTGVLDKDSLQLRAEM
VPMGANLRLENLEHLVTEESLADESADYAYRQELSVLWAAAKLLHAGRQEQRVVNGLRPE
QLGVLDPNALARDFHFQIKEVDGVRRVDITPRQRGSILDTIVAEWMIYCNSASGRLLADH
GIPGLFRTQKGWGPLRTRMQTTPGPHEGLGLEYYAWCTSPLRRYSDLVNQWQLIAIAKHG
ITAKMVAPFPPRDAALMGIAADFEACYSAYGEYQDRLEKYWCLRWATQDEVPKQVFVRHL
KEGMSRVEPVPLHLPVPELATHPRMTRAEVSIADIDLLQLTAGVRVLHIETPEVPESDAS
PT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttatacgaagagggtggcgacatcaaggtcgccacagtccagtctgcctca
ggcgctggcgatgctgaatcttggcaggcaactagtctgtctgggaaaaagattaagtta
aaggctaaagaagtttggctccgttttgaaaagccagaacctcaagccttaatggatgag
gcaagcactttatccaaagagattgatctgcagtttttatgggactgtgcccctgatgaa
gaatttggtttagtagatgttgctcaagagtacttcggcgcacaagctagcgtagcgcaa
cagactgcattagccattgcattgcagggcgcgccagtatttttccgtcgcaaagggcgc
ggacgttttcaaagggcgccactagagcaactgcaggctggtttagctgcgctcgagcgc
aagcaaaaagaattagagcagcagactgcatggcaacaagaactggtagctggagtcttt
ccagaaacactcaagtctcaagcacatcaacttttattttctccggataaaaatacctct
gcctataaagcattgattgcagcgtgtactgagtcaggagagtcgcctgcccagctcatg
atccgttgtggtgcgattgactcacccttgcaatatcaccaggggatgttcttaaaagcg
catttcccacagggctccgagcatgacccaagtttggcggtggatcaagctgcgttagat
gctgctatttcagaattgcctatcgctgaagtcactgcgttctcaatagatgactcaggt
actactgaaattgatgatgctttatcagccactacgctcgagggtggcggacatcgtatc
ggtattcatattgcggcacctggcttggtgatcgctaaggatgatgctttagataaagtt
gcacgtactcgcatgtctaccgtgtatttccctggcgacaaaattacgatgttgcccgat
acggtgatttcgcagttttcattagatgaaggcgctgctcgtccggccttatcaatctat
gtcgatatcgattcgaccggagtgctagataaagactccttgcagttgcgtgccgagatg
gttccgatgggggcaaatcttcgccttgagaatttagagcatctggtaacagaagaaagt
ttggcagatgaatcggctgactatgcttatcgtcaagagctcagtgtgttgtgggccgca
gcaaagttattgcatgcagggcgccaggagcagcgtgtagtgaatggtttgcgtcctgag
caattaggggtcttggatcccaatgccttagcgagagactttcattttcaaattaaagaa
gttgatggtgtgcggcgggtagacattactcctcgtcaacgcggctccatcctcgatacc
atcgttgctgagtggatgatttattgtaatagtgcctcaggacgcttgttagcagatcat
gggatacctggtttgttccgtactcaaaagggttggggccccttacgcacgcgtatgcag
acaactcctggtccacatgaaggattgggtttggagtattacgcctggtgcacgtctcca
ttgcgccgctattcagatttggtgaatcaatggcagttaatcgctatagctaaacatggc
attaccgctaagatggtggcgccgtttcctccgcgagatgcggcattaatgggtatcgct
gctgattttgaagcttgctattcagcctatggtgaatatcaagatcgccttgagaaatat
tggtgcttacgctgggctactcaagacgaagttcctaagcaagtttttgtgagacatctt
aaggaaggcatgtcccgagtagagccagtcccattgcatcttccagttccagagttggcg
acccatccacgtatgactcgagctgaagtcagtattgctgatattgatcttctgcagctc
acagcaggggttcgagtgcttcatatagaaactccagaggttcctgagagtgatgcaagt
cccacctaa
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