Polynucleobacter corsicus: C2747_02290
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Entry
C2747_02290 CDS
T08334
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcos
Polynucleobacter corsicus
Pathway
pcos03030
DNA replication
pcos03430
Mismatch repair
pcos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2747_02290 (dnaE)
03430 Mismatch repair
C2747_02290 (dnaE)
03440 Homologous recombination
C2747_02290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcos03032
]
C2747_02290 (dnaE)
03400 DNA repair and recombination proteins [BR:
pcos03400
]
C2747_02290 (dnaE)
Enzymes [BR:
pcos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2747_02290 (dnaE)
DNA replication proteins [BR:
pcos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2747_02290 (dnaE)
DNA repair and recombination proteins [BR:
pcos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2747_02290 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QWE19083
LinkDB
All DBs
Position
409731..413357
Genome browser
AA seq
1208 aa
AA seq
DB search
MASPRFVHLRVHSEFSITDGVVRIDDAVAAAEKDGMGALALTDLSNLFGLVRFYSAARSG
GIKPIAGADVWVSNPQDPDQPHRLLLLVQNHSGYLNLCQLLSKASLENQSRGRAEVDLKW
FSEPASKAEDKAAKRTLSYGLIALSGGRWGDVGAALLAGQEDLAKEAAQRWASLFPNAFY
IEVQRGGHPQDEQQLQLACHLASEMDLPIVATHPVQFMKRSDFIAHEARVCIAEGELLGN
PRRTKKFNEEQYFLSQEEMEKRFADLPVALANSVEIAKRCNLSLTLGQPRLPDFPTPPGI
TLDDYLLQQSEIGLKRHMERNFPDSEERAKEEARYHERLVFEVKTIAQMGFPGYFLIVAD
FINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDF
CQHGRDRVIQYVKDKYGKDAVSQIATFGTMAARAAIRDVGRVLEQGYNFVDGIAKLIPNK
PGQYMTIEMAKKEEKQLGEREKNEDEVRQLLSLAQQLEGMTRNVGMHAGGVLIAPGRLTD
FCPLYTQEAKDSKDQESGSVISQFDKDDVEAIGLVKFDFLGLTTLTILAAAEKWIQTLHA
DRKDWNIGEILLDDQKAFEVLKNANTVAVFQLESRGMQGMLREAKPDRFEDIIALVALYR
PGPMDLIPDFIERKHGRQKVEYPDPRIEPVLQETYGIMVYQEQVMQMAQMIGGYSLGGAD
MLRRAMGKKKPEEMAQHRKIFSDGAKAGGITEGKANEIYDLMERFAGYGFNKSHAAAYAL
LAYQTAWLKAYYPAEFMAANLSLAMDDTDKVKILYDDCLANNIRVFSPDINTGVYVFTPL
RAPDAAPDSPISHIRYGLGAVRGTGEAAIEVIVKARESGGPFKDLFDFCARVDRRQVNRR
AIEALMRAGAFDSLYKDSIPAGGNPYDIRSTLLASLARAIEAAEQAEASINQVSLFEVAG
EDDRHLPELVRELPWSEKKRLQDEKSALGLCLTGHMFDAYREETAHFIRQPLVKVTEGKD
QLIAGIITSARMLTGQRGRMMIATIDDGTAAIEVTLYSEVYEPNRSWLKEDELLVAKVNI
TPDKFSGGVRIVSEAVMDITGARMRFARNLHLSIDSGIDLQSLRSQIGPYLMSNRVRDPR
LGPAAASMPSASEGMKGLMLTAAVTTSGGACLMQFPDELRIYPDDACLHSLNQILAAKQS
NTVQVQYL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccccgttttgttcatctacgcgtccattccgagttttcaattacggatggc
gtcgttcgcattgacgatgcggtagctgctgctgaaaaagatggcatgggcgccttggct
cttaccgacttaagtaatttatttggcttggtccgtttttatagtgctgcacgctccggc
ggaattaagccaattgcaggcgcagatgtttgggtgagtaatcctcaagacccagatcaa
cctcatcgtttattgctcctggttcaaaatcactctggctatctcaatttatgccagctc
ttgagtaaggcctctcttgagaatcaatcccgcggtcgagctgaggtcgatctcaaatgg
ttcagcgagccagcctcaaaggcggaagataaagctgcaaaaagaacgttgtcgtatgga
ttaattgcactttcaggaggacgttggggtgatgtcggtgctgcgctcctcgctggtcaa
gaagatttagctaaagaggctgctcagcgttgggcgagcttatttccaaatgctttttac
attgaagtgcagcgcggcggccatcctcaggatgagcagcaacttcagttggcttgccac
cttgctagtgaaatggatttgccgattgttgctacgcatccagtgcagtttatgaagcgc
agtgatttcatagcccatgaggctcgagtctgtattgctgaaggtgagcttttaggcaat
cctcgtcgcaccaagaaatttaatgaagagcaatattttttatctcaagaggagatggaa
aagcgctttgcagatttacctgttgcactagctaactcggtagagatcgctaaacgttgc
aacctatctttaaccttaggtcagccacgcttaccggattttccaacgccgcctggtatt
acgctcgacgattatttattgcagcaatctgagattggtttgaagcgccacatggagcgc
aatttcccggattcagaggagcgcgccaaggaagaggctcgctatcacgagcgcttagtc
tttgaggtgaagacaattgctcagatgggtttcccgggttactttctgattgttgcggac
tttattaactgggcaaaaaataatggcgtgccagttggccctggtcgtggatctggtgcc
ggctctttggtcgcctattcattgggtattactgatcttgacccgctgcgttacaacttg
ctctttgagcgcttcctcaatcctgagcgggtatcgatgcccgacttcgatattgacttt
tgtcagcatgggcgcgatcgcgttattcagtacgtaaaagataaatacggcaaggatgca
gtcagtcaaattgcgacctttggaacgatggctgcaagagcggcaattcgtgacgttggt
cgcgtactcgagcaaggctataacttcgttgacggtattgcgaaattgattccgaataag
ccaggtcagtacatgacgattgaaatggctaagaaggaagagaagcaattaggtgagcgt
gaaaagaatgaagatgaagtgcgtcagcttttatctctcgcacagcagttagagggtatg
acccgtaacgtgggtatgcatgcaggtggtgtattaattgcgcctggccgcttaactgat
ttttgcccgctgtatacacaagaagcgaaagattctaaagaccaagagagcggttcagtc
attagtcagtttgataaggacgacgtagaggctatcggcttagtcaagttcgacttccta
ggcttaactaccttaacgattttggcagctgctgagaaatggattcagacgctacatgcc
gaccgtaaagattggaatatcggtgaaattctgctcgatgatcaaaaggcttttgaggtt
ctaaagaatgctaatacggtcgccgtcttccagttagaaagtcgcggcatgcaaggcatg
ctgcgtgaagccaagcctgaccgcttcgaggatattattgcgctcgttgccctctaccgt
cctggaccaatggacttgatcccggactttattgagcgtaagcacgggcggcaaaaagta
gagtatccggatcctcggattgagccagttctgcaagaaacctacggcatcatggtctac
caagagcaggtgatgcagatggcgcagatgatcggcggatattcacttggtggcgcagat
atgttgcgtcgcgcaatgggtaagaagaagcctgaggagatggcgcagcatcgtaagatt
tttagtgacggtgcaaaagcgggtggcattactgaaggcaaagccaacgagatttatgac
ttgatggagcgttttgcaggctatggatttaataaatcccatgctgctgcttatgcgctc
ctggcatatcaaactgcttggctaaaagcctattaccccgctgaatttatggctgccaac
ttatcgctcgcaatggatgacaccgataaggtgaagattctgtacgacgattgcttggca
aataatattcgcgtgttctcgcctgatatcaatactggtgtgtatgtgttcacaccattg
cgtgcacccgatgcggcaccggattctcctattagccatattcgttatggtttaggcgca
gtgagggggactggtgaggcggcaatcgaggtgattgtgaaggcacgcgagtctggcggc
ccttttaaggatctgtttgatttctgtgcgcgagttgatcgcaggcaggtcaaccgccgt
gccattgaggccttgatgcgtgctggcgcctttgatagcttgtataaagactccattcct
gctggtggtaatccttacgatattcgatctactctattggcttctctcgcgcgcgccatt
gaggctgccgaacaagctgaagcctcaattaatcaagtgagtttgtttgaggtggcagga
gaagatgatcgtcatttgccagagttagtccgtgaattaccctggtctgaaaagaagcgt
ctccaggatgagaaaagtgctctaggactttgcttgaccggccatatgttcgatgcctac
cgcgaagagacggcgcatttcattcgccagccattagtcaaggtgaccgagggtaaggat
cagctaatcgctggcattattacctctgctcggatgttgaccggtcagcgtggccgcatg
atgattgcaacgattgatgatggtaccgctgcgattgaagtaacgctctatagcgaagtc
tatgaacctaatcgttcttggctcaaagaagatgagttgctggtggcaaaagtaaatatc
actcctgataagttttctggcggagtgcgtattgtgtctgaggcggtgatggatataacg
ggagcccgtatgcgttttgcgcgtaaccttcatctgtccatcgattcaggaattgatctc
caatctttacgtagccaaattggaccttacttgatgagtaaccgggtgcgtgatccccgg
ctgggtcctgcagcagcctctatgccaagcgctagcgaaggcatgaagggtttgatgctc
acagctgcagtaaccactagtggtggagcctgtctaatgcagttcccagatgagttgcgc
atctatccagatgatgcttgcttgcatagcttgaatcaaattttggcagccaagcaatcc
aataccgttcaggttcagtacctctaa
DBGET
integrated database retrieval system
