Polynucleobacter corsicus: C2747_04140
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Entry
C2747_04140 CDS
T08334
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcos
Polynucleobacter corsicus
Pathway
pcos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2747_04140 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcos03019
]
C2747_04140 (pnp)
03016 Transfer RNA biogenesis [BR:
pcos03016
]
C2747_04140 (pnp)
Enzymes [BR:
pcos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C2747_04140 (pnp)
Messenger RNA biogenesis [BR:
pcos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2747_04140 (pnp)
Transfer RNA biogenesis [BR:
pcos03016
]
Prokaryotic type
tRNA degradation factors
C2747_04140 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QWE19417
LinkDB
All DBs
Position
797954..800119
Genome browser
AA seq
721 aa
AA seq
DB search
MTMFKKAVKTFQWGNHQVIMETGEIARQAGGAVIVNVDDTVVMGTVVASKSAKPGQSFFP
LTVDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFLNEVQVVIHVL
SINPDVPADIPALIAASAALAVSGIPFAGPVGAARVGYANGQYLLNPTRTEQATSEMDLI
VAGTQAAVLMVESEANQLSEEIMLGAVVYGHDQMQTAINAINELVTEAGKPEWDWTAAPK
DEPFIAKVTALAEAPLREAYQIRQKGARTDKLKETTKTVMAKLAEEGDVDAVAVNDIMFE
IEAKIVRSQILNGEPRIDGRDTRTVRPIEIRNGVLPRTHGSALFTRGETQALVVATLGTA
RDEQIIDALEGEYRDRFMFHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPSAE
DFAYSIRVVSEITESNGSSSMASVCGGCLAMMDAGVPVKAHVAGVAMGLILDGNRFAVLT
DILGDEDHLGDMDFKVAGTANGITALQMDIKVQGITKEIMQVALAQAKEGRLHILSKMQE
AMGSVRTELSAHAPRMVSFKIHPDKIREVIGKGGATIQALTKETGCSIDIKDDGTVTIAS
TSAEGMAEAKARIEGITAEAEVGKIYEGPVVKLLEFGALVNILPGKDGLLHISEISNERV
KEVKDYLAEGQVVRVKLLAADERGRLRLSLKAAMAEEGGTIAPLAGAEVSAEAAPPSDEN
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtttaaaaaagcagtaaagacgtttcaatggggcaatcatcaggtaatcatg
gaaacaggcgagattgctcgtcaagctggtggtgctgtcatcgttaacgtggatgacaca
gtagtaatgggcacagtagttgcctctaagtccgctaagccaggccagtcatttttccca
ttgactgttgattacttagagaaaacttacgccgcaggaaaaattcctggtggtttcttc
cgccgtgaaggccgtccatccgaaggtgagacattgatctcccgtttgatcgatcgtcca
ttacgtccattgttcccagaaggtttcttgaacgaagttcaagtagtcattcatgtgctg
tctatcaacccagatgtacctgctgatattcctgcattgatcgctgcttctgcagcttta
gcggtttcaggtattccatttgctggtccagtaggcgcagcacgtgttggttacgctaac
ggccaatacctcttgaacccaactcgtacagagcaagctactagcgaaatggatttgatt
gttgctggtactcaagctgctgtattgatggtggagtcagaggctaatcagttgtccgaa
gaaatcatgttgggtgcagttgtatacggccatgaccaaatgcaaactgcgatcaacgca
atcaacgaattggtaaccgaagctggcaagccagagtgggattggactgctgctcctaaa
gatgagccatttattgctaaggtcactgcactagctgaagcgccattgcgtgaggcatat
cagattcgtcaaaaaggtgctcgtacagataagctgaaagaaactactaaaacagtaatg
gctaagcttgctgaagaaggtgatgttgatgcagtagctgtcaatgacatcatgttcgaa
atcgaagccaagattgtgcgcagccagattttgaatggcgagccacgcattgatggtcgc
gatacacgcactgttcgtccaattgaaattcgtaatggcgtattgccacgcacacacggt
tcagcattgtttacccgtggagagacacaagctctcgtagtagctactttaggtactgca
cgtgatgagcagatcattgatgcactcgaaggcgagtatcgtgatcgcttcatgttccac
tacaacatgcctccgttcgccactggcgaaactggtcgtgtaggtagccctaagcgtcgt
gaaattggtcacggtcgtttggctaaacgtgcattgattccagtattgccaagcgcagaa
gattttgcttacagcattcgtgtggtttcagaaatcactgagtccaatggctcctcatcg
atggcttccgtttgcggtggctgtttagcaatgatggacgctggtgttccagttaaagcg
cacgttgctggtgttgccatgggcttgattttggatggcaaccgctttgctgtgttgaca
gacatcttgggtgatgaagatcacttgggcgatatggacttcaaagtagcgggtactgct
aatggcattactgctttgcaaatggatatcaaagttcaaggtattactaaagaaattatg
caagttgcattggcccaagctaaagaaggtcgtttgcatatcttgagcaagatgcaagaa
gcgatgggttcagttcgtactgaattgtctgcacatgctccgcgcatggtttctttcaag
attcatccagacaagattcgtgaagtaatcggtaagggcggcgcaacaattcaagccctg
actaaagaaactggttgcagcatcgacattaaagatgacggcactgtaacaatcgcttct
acttctgctgaaggcatggctgaagccaaagcacgtatcgaaggcattactgctgaagct
gaagtaggcaagatctacgaaggcccggtagtgaaattgcttgagttcggcgctttagta
aacattcttccaggtaaagatggtctcttgcatatctctgaaatttctaatgagcgtgta
aaagaagttaaagactacttagctgaaggccaagttgttcgcgtgaagttgttagctgct
gatgagcgtggtcgtttacgtttatctctcaaggctgcgatggctgaagagggtggcacg
attgctcctttggcgggtgctgaagtttctgctgaagccgctcctccatctgacgaaaac
gcttaa
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integrated database retrieval system
