Polynucleobacter corsicus: C2747_09530
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Entry
C2747_09530 CDS
T08334
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pcos
Polynucleobacter corsicus
Pathway
pcos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2747_09530 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcos03400
]
C2747_09530 (uvrA)
DNA repair and recombination proteins [BR:
pcos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2747_09530 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2747_09530 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
nSTAND1
RsgA_GTPase
AAA_22
AAA_25
AAA_21
DnaJ_CXXCXGXG
AAA_23
nSTAND3
Viral_helicase1
APS_kinase
cobW
Motif
Other DBs
NCBI-ProteinID:
QWE18516
LinkDB
All DBs
Position
1862836..1865727
Genome browser
AA seq
963 aa
AA seq
DB search
MNNEIKIRGARTHNLKNINLDIPREKLVVLTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLQLMEKPDVDTIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPH
CPDHDLPLEAQSVSQMVDTVLAMPEDTKLMILAPVVSERKGEFVDLFQDLQAQGFVRFRV
RSGGGTTNTAKAEIFEVDQLPALKKNDKHSIEVVVDRIKVRPDIQQRVAESFETALRLAD
GKAMIVDMDTGKEMIFSSKFACPICSYSLQELEPRLFSFNNPMGACPSCDGLGHQSFFDP
KRIVAHPDLSLASGAIKGWDRRNQFYFKLLQTLAKHGGFDVEKPFETLNKKQQDLILLGS
GDVTIPFEYINERGKNSTREHAFEGIVANFERRYRETDSATVREELSRYQNVQTCPSCSG
SRLRKEARFVKVGDGKQSRAIYQISALPLKEAKEYFEALELKGAKREIADKIVKEIGSRL
RFLNDVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRL
IGTLKHLRDLGNSVLVVEHDEDMIRASDYVIDIGPGAGVHGGEVVAEGTPAEVEANPKSL
TGAYLSGREWIAVPEKRIPVNDKFLEIIGARGNNLQSVHAKIPVGLLTCVTGVSGSGKST
LINDTLHHAVAHHIYGSNAEPAAHDAIKGLEHFDKVISVDQSPIGRTPRSNPATYTGLFT
PIRELFCGVPAARERGYEAGRFSFNVKGGRCDACEGDGVIKVEMHFLPDVYVPCDVCHGK
RYNRETLDIRYKGKNIHEVLSMTIEQAHEFFEAVPIVKRKLKTLLDVGLGYVKLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIQLLLTVLQTLKKQGNTIVIIE
HNLDVIKTADWIIDLGPKGGAGGGQIIATGTPEEVAKNAASFTGHYLAPLLIRKQPVAAK
KKK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaaatcaagatccgcggtgcccgcacccataacctcaaaaacatcaatcta
gatatccctagagagaaattagtcgttttgactggcctatctggctcaggaaaaagctca
ttggcttttgacaccctgtatgccgaaggtcagcgtcgctatgtagagtccttatctgct
tatgcccgtcaattcttgcagctgatggagaagcctgatgtcgatacgattgaaggccta
tcaccggcaatctcgattgagcaaaaagcgaccagccataatccccgctcgactgtgggt
acggttacagaaattcatgattacctacgcttgctgtttgcacgcgctggaaccccgcat
tgcccagaccacgatctgccattagaagcgcaaagcgtttctcaaatggttgataccgta
ttagctatgcctgaagacactaagcttatgatcttggctcccgtggtgagtgagcgtaag
ggtgagttcgtagacttatttcaagatctccaagcacaaggctttgttcgctttcgtgtg
cgctcaggtggtggcacaactaatactgctaaagcagagatctttgaagtggatcaattg
ccagcattaaagaagaacgataagcattcaattgaagtggtcgtagatcgtattaaagtg
cgtcctgatattcagcagcgtgtagcagaatcttttgaaactgctctccgacttgctgat
ggcaaagccatgattgtcgacatggataccggcaaggaaatgattttctccagcaagttt
gcctgcccaatttgctcctattcattgcaagaacttgagccacgactcttttcttttaat
aatccgatgggcgcatgtccttcttgtgatggtctaggccatcaatccttctttgatcct
aagcgcattgttgcccacccagacttatcgctggcctctggtgcaattaaaggttgggat
cgtcgtaatcagttttatttcaagctcttacaaacactggccaagcatggcgggtttgat
gtcgagaaaccttttgagactctcaataagaaacagcaagatctgattttattaggctcg
ggtgatgtcaccattccttttgaatacatcaatgagcgcggcaaaaatagtactcgtgag
catgcttttgagggcattgttgctaattttgagcgtcgctatcgtgagaccgactcggca
accgttcgagaagaattatcacgctatcaaaatgtacagacctgcccttcatgtagtggc
agtcgcttgcgcaaagaagcgcgttttgtcaaagtcggtgatggtaagcagtcacgcgcg
atttatcaaatcagcgcccttcctttaaaggaagctaaagaatattttgaagcactcgaa
ctcaaaggcgctaaacgagaaatcgctgacaagattgtgaaagaaattggttcacgtcta
cgattcctaaacgatgtcggcttagactacttatcactagagcgtagcgcagacacactc
tctggtggtgaagcgcagcgcatccgcttggcatcacagattggctctggtctcacagga
gtcatgtacgtattggatgaaccttctattggtttgcatcaacgtgataacgatcgtctt
atcggcaccttgaagcatttacgcgacctcggcaatagcgtgctggtagttgaacatgat
gaagatatgattcgcgcctctgactacgtcattgatattggtcctggtgcgggcgtacat
ggtggcgaagtcgtagccgaagggactcctgcagaagtagaggccaatcctaaatctctc
acaggcgcctacttatctggtcgggagtggatcgccgttcctgaaaaacgtatcccagta
aatgacaagttcttagaaatcatcggtgcacgtggcaacaacttgcaatccgttcacgcc
aagattcctgtcggcttattaacctgcgtcactggcgtatctggctcaggtaaatccacc
ctcatcaacgacaccttgcaccatgcagttgcacatcatatctacggctccaatgcagag
ccagcagcgcatgatgcgataaaaggcttggagcactttgacaaggtcatcagcgtagat
caatccccgattggtagaaccccacgctcaaacccagccacttacactggattattcacg
cctatcagagaactcttttgtggcgtacccgctgcacgcgaacgcggctatgaagcagga
cgtttttctttcaacgtcaagggtggtcgttgtgatgcctgcgaaggtgatggcgttatt
aaagtagaaatgcatttcttaccggacgtatatgttccttgcgatgtctgtcacggtaaa
cgctacaaccgtgaaactttagacattcgttacaaaggcaagaatatccatgaagtgctg
tcgatgaccatcgaacaagcccatgaattctttgaagctgttccaatcgtcaaacgaaaa
ctcaaaaccttactcgatgtgggtttaggttatgtgaaattaggtcaaagcgccacaact
ttgtctggtggcgaggcgcaacgcgtcaaactttctttagagctttctaaacgcgatacc
ggtagaacgctctacatcttggatgagccaactacaggcttgcatttccatgacattcag
ttattactgactgttcttcagaccctcaagaaacaaggcaacacgatcgtcatcattgaa
cacaacttagatgtgatcaaaactgctgattggattattgacttaggacctaaaggtggt
gcaggtggtgggcagattattgctactggaacgcccgaggaagtggcgaagaatgcggct
agctttactgggcattacttagcgccgctattgattcgcaaacaacccgttgcagctaaa
aagaaaaagtaa
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