KEGG   Plasmodium coatneyi: PCOAH_00008460
Entry
PCOAH_00008460    CDS       T10133                                 
Name
(RefSeq) DNA-directed RNA polymerase II 16 kDa subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pcot  Plasmodium coatneyi
Pathway
pcot03020  RNA polymerase
pcot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCOAH_00008460
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCOAH_00008460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcot03021]
    PCOAH_00008460
   03400 DNA repair and recombination proteins [BR:pcot03400]
    PCOAH_00008460
Transcription machinery [BR:pcot03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PCOAH_00008460
DNA repair and recombination proteins [BR:pcot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PCOAH_00008460
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 30907569
NCBI-ProteinID: XP_019913223
UniProt: A0A1B1DUR9
LinkDB
Position
4:complement(1137036..1137704)
AA seq 132 aa
MASNEHGDVKNLDLGPEFQNCKCLNLCELQLILGDQLRLTSKRNEEAQTLIKSSFDYANK
FATIKNRSSIVDVRTNLERIGELHEYEIAMLVNLLPKTVQEARYFIPSLIRLSDETLNSI
LEHLISYKMYVS
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcgagtaacgaacacggggatgtaaaaaacttggacctgggaccagaattccaaaac
tgcaaatgcctaaacttgtgtgagttgcagctcatcttgggagaccagctgcggttgacg
tcgaagcggaatgaggaggctcaaacgctcataaaatcctcgttcgactacgccaacaaa
ttcgcgacgataaaaaacagaagctccatcgtggatgtgcgtaccaacctggaacgcata
ggggaactgcacgaatatgaaattgctatgctggtgaacctactccccaagacggtacag
gaggccaggtacttcatcccgtccctcattcgactgagtgacgagacgttaaactcgatt
ttggagcacctcattagttataagatgtatgtctcatga

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