Plasmodium coatneyi: PCOAH_00009420
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Entry
PCOAH_00009420 CDS
T10133
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcot Plasmodium coatneyi
Pathway
pcot03020
RNA polymerase
pcot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCOAH_00009420
09124 Replication and repair
03420 Nucleotide excision repair
PCOAH_00009420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcot03021
]
PCOAH_00009420
03400 DNA repair and recombination proteins [BR:
pcot03400
]
PCOAH_00009420
Enzymes [BR:
pcot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCOAH_00009420
Transcription machinery [BR:
pcot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PCOAH_00009420
DNA repair and recombination proteins [BR:
pcot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PCOAH_00009420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF4774
Motif
Other DBs
NCBI-GeneID:
30907665
NCBI-ProteinID:
XP_019913055
UniProt:
A0A1B1DUA3
LinkDB
All DBs
Position
4:1662836..1666999
Genome browser
AA seq
1336 aa
AA seq
DB search
MAVKLEPPYFSGEYMHPDAPLEEDHDEEERITEEDSWVVIGSFFGSHGLVNQQIESYNDF
IEYRMQEIIDEHPPIEIRPQPQYRSDRDDSKNVMYALKFGQLSLDRPFYDERNLTNKNLW
PQEARLRNLTYSSAIYIDIEQSTYVVDENSRSQTLKEKFVYERINLGRIPLMLKSMFCWT
KGLPESEIADMGECAFDQGGYFIVNGGEKVLVAQERMAHNFIYVFKKKQPSKFGWVAEIR
SQMERSQATSAFSVKMKTKTGSRGSSVRTGGQLVATLPYIRTEISVGILFRALGCTSDRD
ILQRIVYDFNDKMMINTLRETLEECIDYPTQDICLDFIGKRGPTVGASREKRILYAKELL
RKEVLPHMGTGPGVESKKSYFIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASS
FSTYFRKMAKDVKRVLQRQIDNNKPFDVAGAVRSCSQITQGMQYQLATGNWGKDKDGKVI
RTGVAQVLNRLTYSSCLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGL
VKNLSLMCDISVGTSTNNIFEFLLEWGLESLDEVPPQLMKEKVKLFLNGRWVGCFNQIDN
LIETLYELRRRCDISPEASIVRDVNSKEIKIFTDSGRAMRPLYVVKNVKGENKLKLTKEH
VKNMMAYPETYNWDYLIQEGIIEYIDCEEEETTMISMFIDDLKTGTGYHNNYTHCEIHPS
LILGVCASIIPFSDHNQSPRNTYQSAMGKQAMGIYVTNFNIRLDTLAHLLYYPQRPLVCT
KVMEYLRFRDLPAGINAIVAIMCYTGYNQEDSLIMNQSSIDRGLFRSVFYRTYTSEEKQQ
GSLIIESFEKPSIRFVKNLKRGDYTKLDNDGLIAPGIRVLGDDIIIGKVSPNIEDEDDIV
IQKKVPNVQMGYTSGASTPGASTPGGFLTGKDSSTGGSVLSGSAGSVCGSVSSPYSPSSI
GGSNMMDSMPDSPISDRYSSTSGPVGTVTMGPPSVASSTPTSTTIFRSGNTLSTGSSPQY
GTTIVSGSTKDDLEVPTLTISTSNILKQYKKDCSLSLRENENGVIDTVMLSSNSRGNKFA
KVKVRSVRIPQIGDKFASRHGQKGTIGITYRTEDMPFSSDGTFPDIIMNPHAVPSRMTIG
HLVECLAGKVAAIEGGEGDATPFSKITVQEISQRLHNLGYEKYGNDILYNGHNGKMLKSK
IFIGPTYYQRLKHMVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSA
KMLKERLFEESDAYRVHVCDNCGLCCIADINKNAYECTVCNSKTNISQIYIPYACKLLFQ
ELMTMAIYPKLVLEDM
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaactggaaccgccttacttttcgggcgaatatatgcatccagacgccccg
ctggaagaggaccatgacgaagaggagcgaataacggaggaagacagttgggtggtgatt
gggtccttctttgggagccacggattggtaaaccagcagatcgaaagttacaacgatttt
atagaatacaggatgcaggagataatagatgagcaccctccaatagaaataagaccacag
ccacagtaccgctcagatcgggatgacagcaaaaatgtcatgtatgccttaaagtttggc
cagctctccctagatagaccattctacgatgagagaaatttaacgaataagaatctgtgg
ccacaggaagcaaggctcaggaatctgacctactcctctgctatatacatagatattgag
cagagtacctacgtggtcgatgaaaattcaaggagccaaactttgaaggagaaatttgta
tacgaacggataaacttgggaagaataccactcatgttaaagtcgatgttttgttggacg
aaaggtttaccagagagcgaaattgctgatatgggtgagtgtgcatttgatcagggaggg
tactttattgtgaacggaggggagaaggtactggtagcacaagaacgaatggcgcataat
tttatttatgtgtttaagaagaagcagccttctaaattcgggtgggtagctgagataagg
tctcagatggagaggtctcaagctacatctgctttttctgtgaagatgaaaacgaaaacg
ggttctagaggttcatcagtgaggacaggaggacaactagtagctaccttaccttacata
agaacggaaatttccgttggaattttgtttagagcgctaggttgtacctccgatagggat
atcctccaaaggattgtctacgattttaacgacaaaatgatgattaacacgttgagggag
acactagaagagtgcatagactatcctacgcaggacatctgtctcgacttcatcggtaaa
agaggacccactgttggggcgtcgagagagaaaagaattttatacgcgaaggaacttcta
cggaaggaggttctacctcacatggggaccggaccaggggttgaaagcaagaagtcatac
ttcatagggtacatgattaataggctgttgctagccgagttgggaagaattaaggaagac
gatcgggaccactttgggaagaagcgtctagacattgcagggccgctgatggctagcagt
ttctccacttattttagaaaaatggccaaagatgtgaaacgggttctacaaaggcagatc
gataacaacaaaccattcgatgttgcgggggcggttagaagttgttcacaaattacgcag
ggaatgcagtaccagctagctacaggaaattggggtaaagacaaagatgggaaggtgata
agaacaggagttgcccaggttcttaaccgattaacgtattcatcatgcttgtcccatttg
agacggttgaatacgccactagggagggaaggaaaaatggcgaaaccgaggcagttgcat
aacacccactggggaatgatctgtccattcgaaacgccagaagggcagtccgtaggtctg
gtcaagaatctctccctaatgtgtgacataagtgtgggtacatctaccaataatattttc
gagttcctgctcgagtggggtctagaatcgctagatgaagtgccaccccagttgatgaag
gaaaaggtgaaactcttcctaaatggaaggtgggttgggtgtttcaaccaaatagataac
ctaatagagacgttatatgagttaaggaggaggtgtgacatatcaccggaggcctccatc
gtgagggatgtgaacagtaaggagattaaaatctttaccgattcgggtagggcaatgaga
cctctctacgtggtgaaaaatgtcaaaggggaaaataaactcaagttgactaaggagcat
gtgaaaaatatgatggcctacccggagacctacaattgggactacctcatccaggagggg
atcatcgaatacattgactgtgaagaggaggagaccaccatgattagcatgtttatcgat
gatttgaaaacgggtacaggttaccataacaattatacccactgtgagatccacccgtcg
ttaatcttaggcgtttgtgcatccatcatcccatttagcgaccacaaccagagtccccgt
aatacctaccaaagcgccatgggtaagcaagccatgggaatttacgtcacaaactttaac
atccgattggatacgttagcccatttgttgtactatccacagaggccacttgtatgcacc
aaggtgatggagtacctacggtttagagaccttcctgcgggtattaacgcgattgttgcg
attatgtgctacacagggtataaccaggaggacagtctgatcatgaaccagtcatccata
gatagaggtctctttagaagtgtgttctaccgaacctacaccagtgaagagaaacaacag
ggtagtctcatcatagagtcatttgaaaaaccttccattagatttgttaaaaatttaaaa
agaggcgattacactaagctggataacgatgggttaatcgctccagggatacgggttcta
ggagacgacataattattggaaaggtgtctcccaatattgaggacgaagacgatatagta
attcagaagaaggtacccaatgtgcaaatgggttacacctctggtgcatctacccctggt
gcatctacacctggtgggtttctcacagggaaggattcctcaaccgggggaagtgtactc
agtggaagtgcgggcagcgtttgtgggagtgtttccagtccgtattctccatccagtatt
ggaggttctaatatgatggattctatgcccgattcgccaatcagtgatcggtatagtagc
acaagcggccctgtaggcacagtaacgatgggccccccaagtgttgcctcctccaccccg
accagcaccaccatttttagaagtggaaacacactctccacggggagtagcccccagtat
ggaaccaccatcgtttctggttctacgaaagacgatttggaagttcccacactgactatt
agtacctctaacatcttgaagcagtacaagaaggactgctctttgagcttacgagaaaat
gaaaacggggtcatagacactgttatgttatcttccaacagccgaggcaataagtttgct
aaggtaaaagtccgctcagtacgtatcccccaaattggggataagtttgctagtagacat
ggacagaagggtaccattggaattacataccgaacggaagacatgcccttcagttcagat
ggtacctttccagatataattatgaacccccatgcagttccatcccgtatgacgatcggt
cacctggtcgagtgtctagctgggaaggttgctgcgatagaaggaggagaaggagatgca
actccattttctaaaataactgtgcaggaaatatcacagaggttacataaccttgggtat
gaaaagtatggtaacgacatcctctacaatgggcataacgggaagatgctaaaatcgaag
atcttcattgggccaacttactaccaaaggttgaaacacatggtggaggataaaattcat
gctaggagtagaggtcctctcaccatgattacgagacaacccacggagggacgatccagg
gatggtggattacgtttcggagagatggaaagagattgtatgatttcgcacggatctgcg
aaaatgcttaaggagagactcttcgaagaaagtgacgcctaccgtgtgcacgtgtgtgat
aactgcgggctctgctgcatcgcagacatcaacaagaacgcctacgaatgcaccgtctgc
aatagtaagacgaacatttcgcagatctacatcccctacgcgtgcaagctgctcttccag
gagctcatgaccatggccatatatccgaagctcgtcctggaggacatgtag
DBGET
integrated database retrieval system
