KEGG   Plasmodium coatneyi: PCOAH_00009650
Entry
PCOAH_00009650    CDS       T10133                                 
Name
(RefSeq) Replication factor C
  KO
K10755  replication factor C subunit 2/4
Organism
pcot  Plasmodium coatneyi
Pathway
pcot03030  DNA replication
pcot03410  Base excision repair
pcot03420  Nucleotide excision repair
pcot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCOAH_00009650
   03410 Base excision repair
    PCOAH_00009650
   03420 Nucleotide excision repair
    PCOAH_00009650
   03430 Mismatch repair
    PCOAH_00009650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcot03032]
    PCOAH_00009650
   03036 Chromosome and associated proteins [BR:pcot03036]
    PCOAH_00009650
   03400 DNA repair and recombination proteins [BR:pcot03400]
    PCOAH_00009650
DNA replication proteins [BR:pcot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PCOAH_00009650
  DNA Replication Termination Factors
   ELG1-RFC complex
    PCOAH_00009650
Chromosome and associated proteins [BR:pcot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PCOAH_00009650
DNA repair and recombination proteins [BR:pcot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PCOAH_00009650
  Check point factors
   HRAD17(Rad24)-RFC complex
    PCOAH_00009650
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_30 Rad17 AAA_22 RuvB_N AAA_19 SLFN-g3_helicase AAA_16 AAA_14 AAA_11 DEAD AAA_23 DUF2247 AAA_28 KTI12 nSTAND3 RNA_helicase FtsK_SpoIIIE AAA_assoc_2 AAA_5 PIF1 bpMoxR AAA_18 AAA_7 Viral_helicase1 AAA_2 ResIII MeaB HTH_44 AAA_24 Mg_chelatase ABC_tran SNF2-rel_dom DUF1949 RsgA_GTPase DUF815 VapE-like_dom NPHP3_N ATPase_2 AAA_33 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 30907688
NCBI-ProteinID: XP_019912999
UniProt: A0A1B1DU87
LinkDB
Position
4:1747630..1748622
AA seq 330 aa
MDNLPWVEKYRPKKLDDIVHQTNAVSMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHE
LFGRDNISERVLELNASDDRGINVVREKIKAYTRISISKNKINSETNETLPPWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPIDVKKEKL
LYICKSEGINILDDALDKIIETTQGDLRRAVSILQLCSCIDPMITLESVLDVSGLPADDI
ISKIIDACKMKDLKNVEKAVQDVIEDGYDVAYIFKSLNNYFVMNTEYQDSVKSQILLELS
RNDYRLHSGATKYIQLMSFASSVHSLLNAA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggacaacctaccatgggtggagaaatacaggccgaagaagctggacgacattgtgcat
cagacgaacgcggtgtccatgctgaaggaggtggtgcggacgaagaacatgccgcatttg
atcttccacgggcccccaggcacaggaaaaacctcggctatcaacgctttagcgcatgaa
ttatttggaagggacaacataagcgaacgtgtgctggagttaaacgcgtcagatgaccga
gggataaatgtggtgagggaaaaaataaaagcgtacacaagaataagtataagtaaaaat
aaaataaacagcgagaccaatgaaaccttgccaccatggaagttagtcgttttggatgaa
gcagacatgatgacagaggatgcacaatcagccttgagaagaataatagaaatatattcc
aacgtaacaaggtttatattgatatgtaattatattcacaaaatttctgacccgatatat
agtaggtgttcctgctacagatttcaaggcattccaattgatgtaaagaaagagaagtta
ctttatatatgtaaaagtgaagggattaacattttagacgatgctttggataaaattatc
gagacaactcaaggggatctgagaagagcagtgtccattttgcaactctgttcatgtatt
gaccctatgataacactggaatctgtgttggatgtgtccggtttgccagcagatgatatt
atttctaaaattattgatgcgtgcaaaatgaaggacttgaaaaatgtcgagaaggctgtg
caggacgtcattgaggatgggtacgacgttgcgtacatttttaaatcgcttaacaattac
tttgttatgaatacagagtaccaggattctgtgaagagccaaattctgttggagctgtcc
aggaacgattatcgcctgcacagcggcgccacgaagtacatccagctgatgagcttcgct
tcgtctgtgcattcgctgttgaacgcggcgtag

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