Plasmodium coatneyi: PCOAH_00009650
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Entry
PCOAH_00009650 CDS
T10133
Name
(RefSeq) Replication factor C
KO
K10755
replication factor C subunit 2/4
Organism
pcot Plasmodium coatneyi
Pathway
pcot03030
DNA replication
pcot03410
Base excision repair
pcot03420
Nucleotide excision repair
pcot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCOAH_00009650
03410 Base excision repair
PCOAH_00009650
03420 Nucleotide excision repair
PCOAH_00009650
03430 Mismatch repair
PCOAH_00009650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcot03032
]
PCOAH_00009650
03036 Chromosome and associated proteins [BR:
pcot03036
]
PCOAH_00009650
03400 DNA repair and recombination proteins [BR:
pcot03400
]
PCOAH_00009650
DNA replication proteins [BR:
pcot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCOAH_00009650
DNA Replication Termination Factors
ELG1-RFC complex
PCOAH_00009650
Chromosome and associated proteins [BR:
pcot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PCOAH_00009650
DNA repair and recombination proteins [BR:
pcot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCOAH_00009650
Check point factors
HRAD17(Rad24)-RFC complex
PCOAH_00009650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_30
Rad17
AAA_22
RuvB_N
AAA_19
SLFN-g3_helicase
AAA_16
AAA_14
AAA_11
DEAD
AAA_23
DUF2247
AAA_28
KTI12
nSTAND3
RNA_helicase
FtsK_SpoIIIE
AAA_assoc_2
AAA_5
PIF1
bpMoxR
AAA_18
AAA_7
Viral_helicase1
AAA_2
ResIII
MeaB
HTH_44
AAA_24
Mg_chelatase
ABC_tran
SNF2-rel_dom
DUF1949
RsgA_GTPase
DUF815
VapE-like_dom
NPHP3_N
ATPase_2
AAA_33
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
30907688
NCBI-ProteinID:
XP_019912999
UniProt:
A0A1B1DU87
LinkDB
All DBs
Position
4:1747630..1748622
Genome browser
AA seq
330 aa
AA seq
DB search
MDNLPWVEKYRPKKLDDIVHQTNAVSMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHE
LFGRDNISERVLELNASDDRGINVVREKIKAYTRISISKNKINSETNETLPPWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPIDVKKEKL
LYICKSEGINILDDALDKIIETTQGDLRRAVSILQLCSCIDPMITLESVLDVSGLPADDI
ISKIIDACKMKDLKNVEKAVQDVIEDGYDVAYIFKSLNNYFVMNTEYQDSVKSQILLELS
RNDYRLHSGATKYIQLMSFASSVHSLLNAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctaccatgggtggagaaatacaggccgaagaagctggacgacattgtgcat
cagacgaacgcggtgtccatgctgaaggaggtggtgcggacgaagaacatgccgcatttg
atcttccacgggcccccaggcacaggaaaaacctcggctatcaacgctttagcgcatgaa
ttatttggaagggacaacataagcgaacgtgtgctggagttaaacgcgtcagatgaccga
gggataaatgtggtgagggaaaaaataaaagcgtacacaagaataagtataagtaaaaat
aaaataaacagcgagaccaatgaaaccttgccaccatggaagttagtcgttttggatgaa
gcagacatgatgacagaggatgcacaatcagccttgagaagaataatagaaatatattcc
aacgtaacaaggtttatattgatatgtaattatattcacaaaatttctgacccgatatat
agtaggtgttcctgctacagatttcaaggcattccaattgatgtaaagaaagagaagtta
ctttatatatgtaaaagtgaagggattaacattttagacgatgctttggataaaattatc
gagacaactcaaggggatctgagaagagcagtgtccattttgcaactctgttcatgtatt
gaccctatgataacactggaatctgtgttggatgtgtccggtttgccagcagatgatatt
atttctaaaattattgatgcgtgcaaaatgaaggacttgaaaaatgtcgagaaggctgtg
caggacgtcattgaggatgggtacgacgttgcgtacatttttaaatcgcttaacaattac
tttgttatgaatacagagtaccaggattctgtgaagagccaaattctgttggagctgtcc
aggaacgattatcgcctgcacagcggcgccacgaagtacatccagctgatgagcttcgct
tcgtctgtgcattcgctgttgaacgcggcgtag
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