Plasmodium coatneyi: PCOAH_00009770
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Entry
PCOAH_00009770 CDS
T10133
Name
(RefSeq) Replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pcot Plasmodium coatneyi
Pathway
pcot03030
DNA replication
pcot03410
Base excision repair
pcot03420
Nucleotide excision repair
pcot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCOAH_00009770
03410 Base excision repair
PCOAH_00009770
03420 Nucleotide excision repair
PCOAH_00009770
03430 Mismatch repair
PCOAH_00009770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcot03032
]
PCOAH_00009770
03400 DNA repair and recombination proteins [BR:
pcot03400
]
PCOAH_00009770
DNA replication proteins [BR:
pcot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCOAH_00009770
DNA repair and recombination proteins [BR:
pcot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCOAH_00009770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_assoc_2
AAA_30
DNAX_ATPase_lid
BRCT_2
AAA_14
RCF1-5-like_lid
nSTAND3
AAA_22
AAA_16
RuvB_N
AAA_19
PTCB-BRCT
Sigma54_activ_2
AAA_18
SRP54
Motif
Other DBs
NCBI-GeneID:
30907700
NCBI-ProteinID:
XP_019913152
UniProt:
A0A1B1DV18
LinkDB
All DBs
Position
4:complement(1800948..1803737)
Genome browser
AA seq
929 aa
AA seq
DB search
MSSKGRKLFDDDSDSDRGRKRRRLKKVSSSLFDDDDDDNDQDNDLFNTEETNASKSKGVV
EIKDEEDTYYAGSTSNRSVQNKSSGKSAYHDITSYFKSSSKRMENQIEADQVKTGHNVKD
NAGENSTSPLHLESKKFKKEPSHTSSGLKRQREEALSNMIDEMKYKKKHTSPGKGKTKEE
TNLNNSSGNNTTKKKNLTSMSTIRGINNSDDGANNFDYLPFQNLKFVLTGVFKNFSRDEL
ASKIKEHGGSVMSAVSSKTHYLIHGEYLEDGRMYNEGRKYQKAFEIQKMSKSNIKILNEE
ELLQMLPQEKDKTPNGGDTADGKDDQDAFEKMQQSDFTKVGSESGNSASGSYNRATHSEK
DTPPNCSAPVVQNKIQNQLWVEKYRPKSLNELVGNNQNVLKLKNWLASWDDVCIKGLKKQ
VTKTFRGVFENVNARCALLSGSAGIGKTTTAKIVAESSGYNVIEFNASDERNKAAVEKIS
EMATGGYSIASIKSRKLTKTCIIMDEVDGMSSGDRGGSTAILKLIEKTKCPIICICNDRQ
NSKMRTLANKCYDLKFTTPNKNSVVNRLLEICKKEDIMMEPNALELLWESTNGDMRQMLN
ALQLLSKTYKRIQFLDLKKELNNSNKNIQSLANPFEITLKLLNFHESSKLKIREIMDLFF
VDYELIPFFISENYTNVFNDNDKSANSINKWIAYSQISYDLALAEKIKYNMKTTMDFSLL
PHFSILCCVCPVMRIKMLKAYMSGRINFPSALGRISSFNKNKRLLNEVCFNMSYKLNVCP
KHMVTSGFLNYIYAQIISPLQSNNIPKAIQLMEEYNVTKEMITENIPCLRLPTQENLYDK
LESKVKASFTRQYNASHVIKNDPNMMRKGLKSTEKKTSFKLNEYESDEDMDELSESKEEK
DDDVLVKSKVDKKTAAKGKATPRSKATKR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaagggaggaagctcttcgatgatgatagcgacagcgataggggaaggaaa
agaaggcgactgaaaaaagtatcaagcagtttgtttgatgacgacgatgacgataatgat
caggacaacgatttgtttaacacggaagagacgaatgcttctaaatccaaaggcgttgtc
gaaattaaggatgaggaggatacctactacgcaggatctacgtccaacaggtcagtgcaa
aataagtcgtcaggcaaatccgcgtaccatgacataacgtcctacttcaagtcaagttcc
aaaaggatggagaaccaaatagaggcagaccaagtgaaaaccggacacaatgtgaaggac
aatgcaggagaaaatagtacaagtcccctccacctggaaagtaaaaaatttaaaaaggaa
ccttctcataccagcagcgggctgaagaggcaaagggaagaagccctatccaacatgata
gacgaaatgaaatataaaaaaaaacacacctctccagggaagggaaaaaccaaagaagaa
accaaccttaacaatagcagcgggaataataccacaaaaaagaaaaacctcacctccatg
tccaccatccgtggaattaacaacagcgacgatggagctaacaattttgactacctccct
tttcaaaacctcaagtttgtgttaacaggagtttttaaaaatttctctcgagatgagtta
gcgtcaaaaataaaggagcatggaggaagcgttatgtccgctgtgtcgtcaaaaacgcat
tatctcattcatggggagtacctggaagacggccgaatgtacaacgaggggaggaagtac
cagaaggcgttcgagatccagaagatgagcaagtccaatattaaaattttgaacgaggag
gagctcctccaaatgctaccacaggagaaggacaaaacgcccaatgggggagacaccgct
gacgggaaagacgaccaggacgcattcgaaaagatgcaacaaagcgacttcacgaaagtt
ggaagtgaaagtgggaacagcgcaagtggaagctataatcgtgccacacacagcgagaag
gataccccacccaactgcagtgcaccggtggttcaaaacaaaatccagaaccaactgtgg
gtagagaagtacagaccaaaaagcctaaacgaacttgtagggaacaatcagaatgtgctt
aagttaaaaaattggctagctagctgggatgatgtatgcataaaagggctaaaaaaacaa
gtaacgaaaacattcaggggggtattcgaaaatgtaaatgccaggtgtgcacttttgagt
ggctccgcagggattggaaaaacgacgactgcaaaaattgtggccgaaagttcaggatat
aatgttatcgaatttaatgcgtccgatgagagaaacaaagcggcagtagaaaaaatcagc
gaaatggccacgggagggtactccattgcttcgattaaaagtcggaaattaacaaaaacc
tgcataattatggacgaagtggatggcatgtctagtggagacaggggaggcagtacagcc
atattgaagcttatcgaaaaaacaaaatgcccaattatctgcatttgcaatgacaggcag
aatagcaaaatgagaacattagccaacaaatgctacgacttaaaatttacaactccaaac
aaaaatagcgtcgtcaataggttattggaaatatgcaaaaaagaggatattatgatggag
cccaacgcattggaactcctatgggaaagcacaaatggagacatgagacaaatgctaaac
gcgctccagctactctccaaaacgtacaagcgaatacaattcttggacctaaaaaaagag
ttaaacaattctaataaaaacatacaatcgctagccaacccatttgaaataacactcaaa
ctcttaaacttccatgagtcatccaagttgaaaatacgagaaatcatggacctctttttt
gtggactatgaattgatcccattttttataagtgaaaattataccaatgtatttaatgac
aatgacaagtctgctaactcgataaataaatggattgcctactcgcaaatatcctacgat
ttagccctggcggaaaagattaaatataacatgaaaacgaccatggacttttctctcctt
ccccacttttccattttatgttgcgtgtgtcccgtcatgcgaattaaaatgttaaaggca
tatatgtctggcagaattaacttcccctccgccttaggaaggatttcctccttcaacaaa
aataaaaggctactaaacgaggtgtgctttaacatgtcctacaagctaaatgtctgtcca
aaacatatggttacctctggattcttaaattatatatatgcacagatcatttctccactc
caaagtaataacatacctaaggccatccaactcatggaagaatataacgtcaccaaagaa
atgatcacggaaaatatcccctgcttgagattacccacacaggaaaatttgtatgataaa
ttggagtcaaaagttaaggcatccttcactaggcagtataacgcttcgcacgttatcaaa
aatgatcctaacatgatgcgtaaggggctcaagtcaactgagaagaaaacttccttcaaa
ttgaatgaatacgaatccgatgaagacatggacgaacttagtgaatccaaggaggagaag
gacgatgatgtactggtcaagagtaaggtcgacaagaagactgccgccaaggggaaggcc
acccctcgatccaaggcaacgaaacggtga
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