Plasmodium coatneyi: PCOAH_00010060
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Entry
PCOAH_00010060 CDS
T10133
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcot Plasmodium coatneyi
Pathway
pcot03018
RNA degradation
pcot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCOAH_00010060
09123 Folding, sorting and degradation
03018 RNA degradation
PCOAH_00010060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcot03019
]
PCOAH_00010060
03041 Spliceosome [BR:
pcot03041
]
PCOAH_00010060
Messenger RNA biogenesis [BR:
pcot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCOAH_00010060
mRNA degradation factors
5'-3' decay
Lsm complex
PCOAH_00010060
Spliceosome [BR:
pcot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PCOAH_00010060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
30907732
NCBI-ProteinID:
XP_019913585
UniProt:
A0A1B1DVW5
LinkDB
All DBs
Position
5:complement(159286..160673)
Genome browser
AA seq
95 aa
AA seq
DB search
MTSINIESYLENEILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLEKISLGLYI
IRGDTVTLIGEIDEDVDKNILHHKIKPETLKPIVH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctataaacatcgaatcgtacttagaaaatgaaatattagtcataaccaatgat
agtcgaatttttactggcaaactgaaaggcttcgaccagacgaccaacatcatccttggc
aattgctacgagaggatttacaaagaatcgctggagaaaataagtttgggcctgtacatc
atacgaggagacacagtaaccctaattggtgaaatcgacgaggatgtggataagaatatt
ctgcaccacaagataaaaccagagacgttgaagccgattgtacattag
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