Plasmodium coatneyi: PCOAH_00022970
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Entry
PCOAH_00022970 CDS
T10133
Name
(RefSeq) Regulator of nonsense transcripts
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pcot Plasmodium coatneyi
Pathway
pcot03013
Nucleocytoplasmic transport
pcot03015
mRNA surveillance pathway
Brite
Enzymes [BR:
pcot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PCOAH_00022970
5.6.2.5 RNA 5'-3' helicase
PCOAH_00022970
Messenger RNA biogenesis [BR:
pcot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PCOAH_00022970
mRNA cycle factors
Common to processing body (P body) and stress granule
PCOAH_00022970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
30909023
NCBI-ProteinID:
XP_019914529
UniProt:
A0A1B1DYI7
LinkDB
All DBs
Position
8:1757291..1761775
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AA seq
1494 aa
AA seq
DB search
MDSTFDYNQIDVDDFDDFYNFCTLKEKEKKKNGKNIGEQFFQTDVKNGENRAGDEDGEES
TDNSSVDTTSMYKEGNEKNRSTGKNSKPVLRACNTSHEKRLDEVQTEEENRFMERRVLDL
EHRYAYVDDGYYDTGGKIEMEDESLAEESIANYNKDDQWNNMEYKKKKKKNEQRDGKNMG
FNNPHSSNNCNVHSLQERSSYGDHTSNRYVSISKEDYERDKKKMYEDYNGRRKYPRDYSQ
YSNSNCDSYSYSVDMTCVSKGNKEEPKYFRCRYCEMDSVDSVVQCNTCGRWFCNGSYGTC
GSHIVTHLVRSKHKEIKLHKKSLLGETILECYNCGCKNVFLLGFLPTPEEGVVVIICRDP
CLARCISLSGKGQAKGEMEQEELKQIDEKGNPTEVKNTPEGEPKKGKKKTVPYEDFHAEE
ELIGTDEDDVVSTKEDMDMVKSKGYLSSDDLGTMSEQEKGSDGGGSSLGVLTGKEKNQRG
EERKTEKDVNQKENESDAGSSYSTNVGNNVKELVKMKDWDLNKWQPVIEDRCLLEWLVNI
PTAEEAERKGKRTTSYNVNKLEELWKNKKDVYIDELDAEILNDEPVKVELRYKDAYHYQS
IFAPLIQLEADYDKSIKEGQKQANVTVRWDIGLNKKRYAHFIYVKEESELRLVAGDELKL
SYTYPDGTVWTCEGHISRIHNTEEIALELRTSGTASGPWVDNITTGYTVEFVWKSTAYDR
MQLALNEFAQDSYSLSGYLYHKLLGHEVSEESLNYYKTALTNQVHGKRTPRIANYSAPNL
AALNHSQIDAIKKSLVSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVD
QLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGE
LSQKDERRLKKLIFFAEYKILVEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPEC
LVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHP
ALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLN
RAEASNMEKLVRTLINCGLKPSQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDA
FQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVIVRK
SHNSNETITNVNSVWINLLSQFKKKDLIVEGCLSNLKPMNIHIPTPTKQPSRYINFSYFL
SSERPFRGGVFSDSRSRSRSGGSDKSDKTGRSEGSHAGSDDCRTQSSSSFLHMNMSNLSY
CSDEVMNKDFLSYMHQRQSGGSKQIVKPYIDNLSQGSQFNDFSSVNEKCQSDNFSNYETG
SSLSISTNKYAKENLMRYNGGSLREDRKNRVASNFADSNFGEDYHGSSFVRNSDMLHYPF
HYGSKRDASSLHNGQGLHGSHRSHNPRSNAAHHGYIKQNHPNTVEQRKYRYRNV
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggacagcacattcgactacaaccaaatagatgtggacgattttgacgacttttacaat
ttctgtactctgaaggagaaggagaaaaaaaaaaatgggaaaaatattggggagcagttt
ttccaaacggatgtgaaaaatggagaaaacagggcaggcgacgaagacggggaagaaagc
acggataattcctccgtagacaccacgagcatgtacaaagaaggaaatgagaaaaatagg
tcgactggaaaaaatagcaaaccagtactacgggcttgcaacacttcgcatgagaagagg
ctggatgaggtgcaaacagaggaagaaaaccgcttcatggagaggagagttcttgacttg
gaacacagatacgcatatgtagatgatggttattacgataccggtggtaagatcgaaatg
gaagatgaaagtttggcagaggagagtattgctaattacaacaaggatgaccagtggaat
aacatggaatacaaaaaaaagaaaaaaaaaaacgaacagagggatggaaagaacatgggc
ttcaataatccgcacagtagcaataactgcaatgtgcactccctccaggagagaagcagc
tatggggatcacacttccaacaggtacgttagcatatcgaaagaggactacgagcgggat
aaaaaaaaaatgtacgaagattacaatggaaggagaaagtacccaagagattacagccaa
tactcgaacagtaactgtgacagttacagctatagtgttgatatgacatgcgtcagtaag
ggaaataaagaagagccaaaatatttcagatgtcgttactgtgaaatggattctgtggat
agtgtggttcagtgcaacacgtgcggtcgatggttctgcaatgggtcctacggtacatgt
ggtagccacattgttacgcatctggtgaggtccaaacacaaggaaattaaactacacaag
aagagcctcctcggggagaccatcttggagtgctataactgtgggtgcaaaaatgtgttt
ctgctggggttcttacccacgccggaggagggagttgtcgtcattatatgcagggaccct
tgcttagccaggtgcatttcactgagcgggaagggccaggcgaagggcgaaatggaacaa
gaggagttgaagcaaatagatgaaaaggggaaccccactgaagtgaagaacaccccagag
ggagagcctaagaaggggaaaaaaaaaactgtaccttatgaagatttccacgcggaagag
gagctaattggcacggacgaagatgacgttgtgagcacgaaggaagacatggacatggtg
aagagtaagggctacctaagcagcgatgatttgggcactatgagtgagcaggaaaagggg
agcgacgggggaggaagttcccttggggtgcttacagggaaggagaagaatcaaaggggg
gaagagagaaaaacggagaaggatgttaaccagaaagagaacgaatccgatgccggaagc
agttatagcacaaatgtaggaaacaatgtaaaggagcttgtaaagatgaaggactgggat
ttaaacaaatggcaaccagtgattgaagacaggtgtctactagaatggctagtaaatatc
cccacggcggaagaagcagaaagaaagggaaagagaaccacatcctataatgtgaacaag
ctagaagagctatggaaaaataaaaaagacgtatatatagacgagctagatgcagagata
ctgaatgatgaacccgttaaggtagagctaaggtataaagacgcttaccattatcagtcc
atctttgcaccgttgatccagttagaggcggactacgataaatccataaaggagggtcag
aaacaagcaaatgtaacagtccgttgggatataggattgaataaaaaaaggtatgcccac
tttatttacgtgaaggaagaaagtgaactaaggttagtagcaggagatgagttaaaattg
tcgtatacatatccagacggaacggtgtggacttgcgaaggacacatttctagaattcac
aatacggaggaaatagccttagaattaagaacgtctggtacggctagtggaccatgggta
gataacataaccacggggtatacagtggagtttgtttggaaaagtacagcatacgatcga
atgcagttagcgttgaatgagtttgctcaggactcctattcactcagtgggtacttgtat
cataagttgctaggccatgaagtgtcggaggagtcactaaattattacaaaacggcattg
accaatcaggtccatgggaagaggactccacgcatcgcaaattattccgcccccaatttg
gctgcactgaatcactcacaaattgatgctataaagaaaagcttagtttcgccgttatcc
ctaattcaaggaccaccagggacagggaaaacattaacctgtgctacgctggtgtatcat
ttgtccaagacgaaaatggggaaggtgttagtcaccgccccgagtaacgttgccgtagat
cagctttctgtaaggatacacaaaactggactaaaggtagtacgactgtgtgcgaaaagt
agagaatacgtacccagcattgcagattatttgtacctccacaatcagatgaagttacta
aaatcggatattggagaggagctgaacaaattacttgaactgaaggaggaagtaggagag
ttgtcacaaaaggatgaaaggaggttaaaaaagttaatctttttcgcagaatataaaata
ttggtagaggcagatgtgatatgtactacctgtgttggtgccatggacaaacggttgaaa
cgttttcgatttagccaagtgttagtagatgaagcgactcagtcaacagaaccagagtgt
ttggtacccctcgtaacgggagctaaacagattgtactggttggagaccactgccagttg
ggtccaataatagtttgtaaaaaggcagccaatgcgggtttgggaaagagcctattcgaa
cggttagttatgttgggtatcacaccattcaggttggaagtgcagtaccgtatgcaccca
gcattaagtgaattcccatcgtacgtcttctatgatggttgtctgcagaacgggatcacc
ttgaaggagagggaatatccactgaaggattttccgtggccgaatccgaagtgccctatg
ttcttttacaattccaccgggttggaagaaatgtctgcctccgggacgagctacttaaac
agagcagaagcgtccaatatggagaagctagttagaacgctcataaattgtgggttgaag
ccatctcaaattggggttataacaccgtatgaggggcagagggcgtatataacttccctt
tttcagaaaaacatttcttatcaacattcaacggagattgaagtggcatcagtggatgca
tttcaaggaagggaaaaggacttcatccttctctcttgtgttcgatcgaacaagaaatta
ggaattggttttttaaatgacccaagaaggttaaacgtagcattgacgagggccaagtat
gggttgatcatatgtggtaatgccaaggtgctttcgagacatcacgtaattgtaaggaag
tctcataactcgaatgagacaatcacgaatgtgaactccgtgtggattaacctgctaagt
cagtttaagaagaaggacctcatcgtcgaggggtgcttatccaatttgaaaccgatgaac
attcatataccgaccccgacgaagcagccgtccagatacatcaactttagttacttcttg
tcgagtgagaggcctttccgggggggcgtattctcagatagtaggagcaggagcagaagt
ggtggtagtgataaaagcgataaaactggcagaagtgaaggaagccacgctggcagtgac
gactgtagaacccaaagcagcagctcctttttacacatgaatatgtcaaacctcagctac
tgcagtgacgaggtgatgaacaaggacttcctgagctacatgcatcaaaggcaaagtgga
ggaagcaagcagatcgtaaaaccttacatagacaatttgagtcagggatcccaattcaat
gacttttcttctgttaatgaaaaatgccaaagtgacaacttctcgaattatgagactgga
tcttccctttcgattagcacgaacaaatatgccaaggaaaatttgatgcgctacaatggc
ggcagtttgcgtgaggataggaagaaccgtgtggccagcaattttgcggattccaatttt
ggagaagactaccatggcagcagcttcgtgaggaactctgatatgcttcattacccattt
cactacggaagtaagagggacgcctccagtctgcacaacgggcagggattacacggatca
caccgatcgcataatccgcgaagtaatgccgcccaccacgggtacattaaacagaaccac
ccgaatacagtagaacaaaggaaatatcgatatagaaatgtatga
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integrated database retrieval system
