Plasmodium coatneyi: PCOAH_00050600
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Entry
PCOAH_00050600 CDS
T10133
Name
(RefSeq) Pre-mRNA splicing factor
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pcot Plasmodium coatneyi
Pathway
pcot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCOAH_00050600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcot03041
]
PCOAH_00050600
Spliceosome [BR:
pcot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PCOAH_00050600
Complex C
U4/U6.U5 tri-SnRNP related factors
PCOAH_00050600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
30911794
NCBI-ProteinID:
XP_019917380
UniProt:
A0A1B1E6Q7
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Position
13:complement(1573757..1576724)
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AA seq
691 aa
AA seq
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MDNQYNNAEPPASYPPNVPSHATQPNQPNQPNQLIQPSQPNQLNQLDQNGINKQMYDYYY
YNSNPGGSMGNKTGYNNMQGDVPFDGNYALNYGYMDPSFYHMNSGMHPMGSMMNPYSNAM
SRFPSRMEEHPNSSYRYSNLDHTYRGGMKYKLGANNASSSSFHSSLTNYNNEEKKNILEM
TNTTTYNVNTLLRNNILSSEYFRSLVPLKTFKEVVEEIHLYADHVEPYCIGSTRAPSTLF
CCLYKLFTMHLSEKQMKVLIESRESCYIRACGFLYLRYVHSPANLWMWFEPYLLDEDEFI
TSADKRKKQTIGEYVQCLLAEDKYFNTVLPRMPIKIKNTYGARLMLMSDHRRRLRKNKEK
MHKFVKGEPIMAYVNGEWEKGEIGGIVNHGKEKIFVRIRKIDGNEKLVNMGYVKLDSEDP
HREGDTESAADATERSRVRNEKTHRRSSRSRSGKRRRRRSRSRSRGRRSRSRSRSRSRHR
GRHKDRSRDRDRSRDRNRSRSHDRDRRRKRRTSEERNDKKHSSHDKSHRDHRDRSLTKRG
RTSYEDSHRKRDESASRSSRSYSSREDDKAYRKDKYEINENELINKYRKIESQKALATGK
DYARRPTSYKSSLTIKVENIQTRRKSISRSPKRIDKTVSHSQKDEKGTENAAMENSKLMQ
LMQKYNKEDDGETRSKMNSGDMDEMDVMTLG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccagtacaacaatgcagaaccccccgcttcatacccaccgaacgtgcctagt
cacgccactcaacccaatcaacccaatcaaccaaatcagctaattcaacccagtcaaccc
aatcagctgaaccaactggaccaaaatggcataaacaagcagatgtacgactactattac
tacaacagtaaccccggtgggtctatgggcaacaagacgggttataacaatatgcagggg
gacgtacccttcgacggaaactatgccctcaattacggatacatggacccgtccttctat
cacatgaacagtggaatgcaccccatgggtagtatgatgaacccatacagtaacgccatg
agtaggttcccaagcagaatggaagaacacccaaatagcagctacagatatagcaattta
gaccatacctatagggggggtatgaaatataagctaggtgcaaacaatgcatctagtagc
tccttccattcatctctaacaaattacaacaatgaagaaaaaaaaaatatcctagaaatg
acaaacactacaacgtacaatgtaaatacgttactcagaaataatattttatcgtccgaa
tatttcagatcgctagttccactgaaaacctttaaggaggtcgtagaagaaattcactta
tatgcggaccatgtggaaccctactgcattggaagtacaagggccccgtcgactcttttt
tgctgcctctacaagttgtttaccatgcatttgtcggagaagcagatgaaggtgctgatc
gaaagtcgtgaatcctgctacatacgagcctgcggatttttgtatttgagatatgtccac
tcgcctgccaatctttggatgtggtttgaaccctacctcctggatgaagatgagtttatc
acatcagctgacaaacggaagaagcagacgataggcgagtacgttcagtgcctcctggcg
gaggataagtatttcaacacagttctgcctagaatgcccataaaaataaaaaacacctat
ggcgcacgactgatgttgatgagtgaccataggaggagactcagaaagaacaaggaaaag
atgcacaaatttgtgaaaggagaacccattatggcctatgtcaacggagagtgggagaag
ggcgaaataggaggcatcgtgaatcacgggaaggagaagattttcgttcgaatcagaaaa
atcgatgggaacgaaaagctcgttaatatgggctacgtgaagctagactcggaggacccc
cacagggaaggggatacagaaagtgctgcggatgccaccgaaaggagccgagtcagaaat
gagaaaacgcacagaaggagtagtagaagtaggagcggcaaaagaaggaggcgaagaagc
agaagtagaagtaggggaagaaggagcagaagcaggagcagaagcagaagtcggcataga
ggtagacacaaggataggagtcgtgatcgggatagaagtcgagatcggaatagaagtaga
agtcacgaccgggatagacgcagaaagagacgaacgagcgaagaacggaacgataagaaa
cactcctcacacgacaaatcgcatagagaccatcgtgataggtcactcacgaaacgcgga
agaacatcctacgaagattcgcacaggaaaagggacgaatcagcatccagatcgtctagg
tcatacagttctagagaagatgataaagcatacagaaaagacaagtacgaaattaatgaa
aacgaattaattaacaagtatagaaaaatagaaagccaaaaggcactcgctactggaaag
gattatgctcgaagaccgacgtcatataaatcctccctaacgataaaggtagagaatatt
caaacaagaaggaagtccatttcgaggtctccaaaaagaatagacaaaacagtgagtcat
tcgcagaaggatgaaaagggcactgaaaatgctgcgatggaaaactccaaattgatgcag
ctaatgcaaaagtataacaaagaggatgatggtgagacgaggagcaaaatgaactctggc
gatatggatgaaatggatgtcatgacgttggggtaa
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