KEGG   Plasmodium coatneyi: PCOAH_00052590
Entry
PCOAH_00052590    CDS       T10133                                 
Name
(RefSeq) Replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pcot  Plasmodium coatneyi
Pathway
pcot03030  DNA replication
pcot03410  Base excision repair
pcot03420  Nucleotide excision repair
pcot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCOAH_00052590
   03410 Base excision repair
    PCOAH_00052590
   03420 Nucleotide excision repair
    PCOAH_00052590
   03430 Mismatch repair
    PCOAH_00052590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcot03032]
    PCOAH_00052590
   03036 Chromosome and associated proteins [BR:pcot03036]
    PCOAH_00052590
   03400 DNA repair and recombination proteins [BR:pcot03400]
    PCOAH_00052590
DNA replication proteins [BR:pcot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PCOAH_00052590
  DNA Replication Termination Factors
   ELG1-RFC complex
    PCOAH_00052590
Chromosome and associated proteins [BR:pcot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PCOAH_00052590
DNA repair and recombination proteins [BR:pcot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PCOAH_00052590
  Check point factors
   HRAD17(Rad24)-RFC complex
    PCOAH_00052590
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C RCF1-5-like_lid AAA_14 Viral_helicase1 AAA_16 Rad17 AAA_22 AAA_11 AAA_19 AAA_5 Mg_chelatase RuvB_N AAA_24 AAA_assoc_2 AAA_25 ORC-CDC6-like AAA_3 nSTAND3 AAA_7 FtsK_SpoIIIE NPHP3_N MCM AAA_30 DUF2247 MeaB AAA_18 API5 MipZ PB1 DUF815 AAA_28 bpMoxR Zeta_toxin DUF7801 ATPase
Other DBs
NCBI-GeneID: 30911993
NCBI-ProteinID: XP_019917749
UniProt: A0A1B1E7N8
LinkDB
Position
14:complement(550389..552109)
AA seq 336 aa
MEEDSFKNRLLKRNIDIWIEKYRPENLDDVVGNPFVINTLKSIIVSGNMPNLLLAGAPGT
GKTTSILCLASEMLGSQAKKAVLELNASDDRGINVIRDRIKSFAKEIISLPPGKHKIIIL
DEVDSMTTAAQQSLRRIMELYSDTTRFALACNQSEKIIDALQSRCAIIRYFKLSDDQVLK
RIVKICQMENIKYTDDGLETLTFIADGDLRKAVNCLQSTYAGLEVINKENVLNICDIPSP
ERIESLLKFCVNSEWKKAHDIAYDMIREGHTPFDVALTSSNVLRRYDLGSEAVQIEFLKI
GAMACNTMASGLASVIQLDRLLADWCIAAKAFRTKC
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggaggaagattcctttaagaacagactgctgaagcgcaacatcgacatatggatagag
aagtaccgcccggaaaacctagacgatgtagtgggaaacccctttgtcataaatacactc
aagagcatcattgtgtcggggaatatgcccaacctcctcctagcgggtgccccggggact
ggaaaaacgacgagcattctctgcttggccagcgaaatgttaggatctcaagcgaagaaa
gccgtcctggaattgaacgcctcagatgacagaggaattaacgtaatcagagacagaata
aaaagtttcgcaaaggaaattataagtctccccccaggaaaacacaaaattattatactg
gacgaagtagactccatgaccacagctgcacaacagtcattaagaagaatcatggagctg
tactcggacaccacaagatttgctttagcttgtaaccagtctgagaaaataattgacgcg
cttcaaagcagatgtgccattatacggtactttaaattatcagatgatcaggttttgaag
cgaattgtaaaaatatgccaaatggaaaacataaaatacacagacgatgggttggaaacc
ctcacctttatagcagatggggacttgcgaaaagcagtcaattgtctgcagtccacttat
gctgggttagaagttataaacaaagaaaatgtgctaaatatatgtgatattccttctcct
gaaagaattgaaagtttactaaaattttgcgtaaacagtgagtggaaaaaggcacatgac
attgcgtatgacatgatcagggaaggacacacccctttcgacgttgctttaacgtcttcc
aatgtgttgaggagatacgacttaggctccgaagctgtgcaaatcgagtttttaaaaatt
ggtgccatggcttgtaacaccatggccagtggtctggccagcgttatccagctggatagg
ttgctcgccgactggtgcatagcagccaaggcgttccgcaccaagtgctag

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