Plasmodium coatneyi: PCOAH_00052590
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Entry
PCOAH_00052590 CDS
T10133
Name
(RefSeq) Replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pcot Plasmodium coatneyi
Pathway
pcot03030
DNA replication
pcot03410
Base excision repair
pcot03420
Nucleotide excision repair
pcot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCOAH_00052590
03410 Base excision repair
PCOAH_00052590
03420 Nucleotide excision repair
PCOAH_00052590
03430 Mismatch repair
PCOAH_00052590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcot03032
]
PCOAH_00052590
03036 Chromosome and associated proteins [BR:
pcot03036
]
PCOAH_00052590
03400 DNA repair and recombination proteins [BR:
pcot03400
]
PCOAH_00052590
DNA replication proteins [BR:
pcot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCOAH_00052590
DNA Replication Termination Factors
ELG1-RFC complex
PCOAH_00052590
Chromosome and associated proteins [BR:
pcot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PCOAH_00052590
DNA repair and recombination proteins [BR:
pcot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCOAH_00052590
Check point factors
HRAD17(Rad24)-RFC complex
PCOAH_00052590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
RCF1-5-like_lid
AAA_14
Viral_helicase1
AAA_16
Rad17
AAA_22
AAA_11
AAA_19
AAA_5
Mg_chelatase
RuvB_N
AAA_24
AAA_assoc_2
AAA_25
ORC-CDC6-like
AAA_3
nSTAND3
AAA_7
FtsK_SpoIIIE
NPHP3_N
MCM
AAA_30
DUF2247
MeaB
AAA_18
API5
MipZ
PB1
DUF815
AAA_28
bpMoxR
Zeta_toxin
DUF7801
ATPase
Motif
Other DBs
NCBI-GeneID:
30911993
NCBI-ProteinID:
XP_019917749
UniProt:
A0A1B1E7N8
LinkDB
All DBs
Position
14:complement(550389..552109)
Genome browser
AA seq
336 aa
AA seq
DB search
MEEDSFKNRLLKRNIDIWIEKYRPENLDDVVGNPFVINTLKSIIVSGNMPNLLLAGAPGT
GKTTSILCLASEMLGSQAKKAVLELNASDDRGINVIRDRIKSFAKEIISLPPGKHKIIIL
DEVDSMTTAAQQSLRRIMELYSDTTRFALACNQSEKIIDALQSRCAIIRYFKLSDDQVLK
RIVKICQMENIKYTDDGLETLTFIADGDLRKAVNCLQSTYAGLEVINKENVLNICDIPSP
ERIESLLKFCVNSEWKKAHDIAYDMIREGHTPFDVALTSSNVLRRYDLGSEAVQIEFLKI
GAMACNTMASGLASVIQLDRLLADWCIAAKAFRTKC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagattcctttaagaacagactgctgaagcgcaacatcgacatatggatagag
aagtaccgcccggaaaacctagacgatgtagtgggaaacccctttgtcataaatacactc
aagagcatcattgtgtcggggaatatgcccaacctcctcctagcgggtgccccggggact
ggaaaaacgacgagcattctctgcttggccagcgaaatgttaggatctcaagcgaagaaa
gccgtcctggaattgaacgcctcagatgacagaggaattaacgtaatcagagacagaata
aaaagtttcgcaaaggaaattataagtctccccccaggaaaacacaaaattattatactg
gacgaagtagactccatgaccacagctgcacaacagtcattaagaagaatcatggagctg
tactcggacaccacaagatttgctttagcttgtaaccagtctgagaaaataattgacgcg
cttcaaagcagatgtgccattatacggtactttaaattatcagatgatcaggttttgaag
cgaattgtaaaaatatgccaaatggaaaacataaaatacacagacgatgggttggaaacc
ctcacctttatagcagatggggacttgcgaaaagcagtcaattgtctgcagtccacttat
gctgggttagaagttataaacaaagaaaatgtgctaaatatatgtgatattccttctcct
gaaagaattgaaagtttactaaaattttgcgtaaacagtgagtggaaaaaggcacatgac
attgcgtatgacatgatcagggaaggacacacccctttcgacgttgctttaacgtcttcc
aatgtgttgaggagatacgacttaggctccgaagctgtgcaaatcgagtttttaaaaatt
ggtgccatggcttgtaacaccatggccagtggtctggccagcgttatccagctggatagg
ttgctcgccgactggtgcatagcagccaaggcgttccgcaccaagtgctag
DBGET
integrated database retrieval system