Plasmodium coatneyi: PCOAH_00053110
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Entry
PCOAH_00053110 CDS
T10133
Name
(RefSeq) Uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pcot Plasmodium coatneyi
Pathway
pcot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCOAH_00053110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcot03019
]
PCOAH_00053110
03041 Spliceosome [BR:
pcot03041
]
PCOAH_00053110
Messenger RNA biogenesis [BR:
pcot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PCOAH_00053110
Spliceosome [BR:
pcot03041
]
Complex B
Other components
Prp19-related factors
PCOAH_00053110
Complex C
PCOAH_00053110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
TPR_14
HAT_PRP39_N
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
30912045
NCBI-ProteinID:
XP_019917638
UniProt:
A0A1B1E7I6
LinkDB
All DBs
Position
14:821057..824466
Genome browser
AA seq
930 aa
AA seq
DB search
MELYGELYDCDELLDEYNADCGDAKPPWGEALLGEDTTAQCVEDEAHVKNIEVDIKSNKK
NVSTQYLFLYINTFKQKNIRNDKTLYVVNFYDIHMKSDDKNVLETEKDIMEHCWENVSRA
ARRDHHDGDDDGHDDAVQSSHRSKYYLFKIYATILKYFPFSFKLWYHYLKDRIEMLGGVY
YDQKEEYEDVNRVFEQCLLYMYHFKAIYILYIQFLFLQRKVQKIRLIFNLALQNISLNQH
EDLWEYQLKYNKKIKSKLINYEYIKRYVTIYPENIVHLFNHYVRYKMCKHALNTFFYMIS
CDEEENLQLGEKSIYDLYRELFQLISSRKVLDNDVLVTLRKNFDTFKRYENVTSIYTLLA
NSFVYEGRWNKAMDAYEEGILECYTVNDFSVLFEGYIETMKILIELKMRKEEGNDVISSS
GEDTDGGNRDQLSPSGDDSVVDLYMDKINYLLDKRKVFIADIKLKNNQKNVYVWLGKIDA
VETANEKVDLYNRCLKHFEDGDYAGRLSDVYISYAYFHYNRNEYDKAVNVFNRAVRDHSF
KTLNEIASVYCSWIEVELLEGNSKKALRIARLVIDLSNSGGGGRRSPMKKYTGPNIHEGS
ESLIGRNIPMLGDDHFRSLNQNFSLLNNVKLACLILDLEINYGTIETSINLFDMLYHKKI
ITVKMVLSFANYLYENKYFYECFKTYEKAISIFHYPYLYPVYVHYISKYVERYKDKNISY
VRELYKQAIYGVDEKTFIPKEFAKIVFLMYASFEENYGFLKRSLSIYKEAVPFLPEPDKV
KFYKLFISKVSKSYGVHKAREAFEEAIQTLKDDDAREICLLYIDMENKLNEYDRVRALYI
YTAQFTNPSVHVSFYQDWREFEALHGNEHTFREMIRIKRSVLSLFSNSRSASKPLGMLED
DDVDGLENTKRKLQEMIDNEENAQKRVKVG
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtacggagagctctacgactgtgatgaattgctggacgagtacaatgcggac
tgtggggatgcaaaacccccctggggggaagccctcctgggtgaggataccaccgcccag
tgtgtagaagacgaagcgcacgtgaaaaacatagaagtagatataaagagcaacaagaaa
aatgtgtcgactcagtatctattcctttacatcaatacgtttaagcagaaaaacatcaga
aatgacaagaccctctacgtagtgaacttttatgacatccacatgaagagcgacgataag
aatgtgctagagacggagaaggacataatggagcattgctgggagaacgtttcgagggca
gcaaggagggaccaccacgatggtgatgacgatggtcacgacgatgccgttcagagtagt
caccgttcgaagtactacctgtttaaaatttacgcaaccattctgaagtacttccccttc
agcttcaaactttggtaccactacctgaaggaccgcatagaaatgttgggcggagtttac
tatgaccagaaggaggagtatgaggacgtgaatcgagtgttcgaacagtgcctcctatac
atgtaccattttaaagccatctacatattgtatatacagtttctcttcctccaaaggaag
gtgcaaaagataaggctcatctttaaccttgccctacaaaacatcagtctgaatcagcat
gaagacctctgggagtatcagctaaaatataataaaaaaataaaaagcaagttaatcaac
tacgaatacattaaacggtacgtaacaatctatccggagaatattgttcacctttttaac
cactacgtgaggtacaaaatgtgtaaacacgctctaaatacatttttctacatgatcagt
tgtgatgaggaggaaaatctccaactgggagaaaagtccatatacgatttgtatagggaa
ttatttcagttgatcagttcacgtaaagtattagacaacgacgtgttggtaacactgagg
aaaaacttcgatactttcaagcggtatgaaaatgtgacctccatttatacgttgctggca
aatagcttcgtgtatgagggtcgttggaataaggctatggatgcctatgaggagggcatc
ctagaatgttacacggtgaacgacttctcagtactttttgaggggtacatagaaacgatg
aaaatactaatcgaattgaagatgcgcaaggaagagggaaacgacgtgataagtagtagc
ggggaggacaccgatggaggtaatcgtgaccagctttccccctctggggacgactccgtg
gtggacctctacatggacaaaataaattacctgctggacaagcgcaaggtgttcatagca
gatatcaaactgaagaacaaccagaagaacgtttacgtgtggttaggcaaaatagatgca
gtcgaaacggcgaatgaaaaggtggacctctacaacaggtgcttaaagcatttcgaagac
ggagattacgctggtcgactcagcgacgtctacatcagttacgcatatttccactacaat
cgtaacgagtatgacaaagcagtgaatgtattcaatagagctgtgcgtgatcacagtttt
aaaacgctgaatgagattgcaagtgtgtattgttcctggatagaggtggagttacttgag
ggcaattctaagaaggccctgcgtatagccagattggttatcgatctgagtaacagtggg
ggaggaggaagaaggagtccgatgaagaagtacaccgggccaaacatacacgaaggaagt
gaatccctcattggaagaaacataccaatgttgggagatgaccattttagaagtctaaac
cagaacttcagccttttaaataacgtaaagttagcttgcctcatccttgacctggaaata
aattatggtaccatcgaaacgtccataaatctgtttgatatgctgtaccataagaagatc
atcacggtgaagatggtcctctcatttgccaactacctgtatgagaacaagtacttctat
gaatgctttaaaacatatgagaaggccatttccattttccattacccttacctgtacccg
gtgtacgtacactacataagtaaatatgtggagcgttacaaggataagaatatttcctac
gtgcgtgagttatacaaacaagccatttacggagtggatgaaaaaacatttatccccaag
gagtttgccaaaattgtgttccttatgtatgcctcttttgaggagaactacgggtttctg
aagaggtccctttccatttataaggaggccgttcccttcctccccgagccggacaaagtc
aagttttacaagctctttatttcgaaggtctccaaatcgtacggagtgcacaaggcgagg
gaggctttcgaagaggccatccagactctgaaggacgacgatgcgcgtgaaatatgtctg
ttgtacatcgacatggagaacaagctgaacgaatacgatcgtgtccgggcgctttacatc
tacactgctcagttcaccaacccgtctgtgcacgtgtccttttatcaggattggcgagaa
ttcgaagcgctgcacgggaatgagcacaccttcagggaaatgataaggatcaagaggagc
gtcctcagcctgttctcaaattcgcgcagcgccagcaagccattgggcatgttggaggac
gatgatgtggacggtttggagaatacgaaaagaaaactgcaggaaatgattgacaatgag
gagaacgctcagaaaagggtgaaggtaggttga
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