Plasmodium coatneyi: PCOAH_00054540
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Entry
PCOAH_00054540 CDS
T10133
Name
(RefSeq) Polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
pcot Plasmodium coatneyi
Pathway
pcot03015
mRNA surveillance pathway
pcot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PCOAH_00054540
09123 Folding, sorting and degradation
03018 RNA degradation
PCOAH_00054540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcot03019
]
PCOAH_00054540
03041 Spliceosome [BR:
pcot03041
]
PCOAH_00054540
Messenger RNA biogenesis [BR:
pcot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PCOAH_00054540
mRNA cycle factors
Stress granule specific factors
PCOAH_00054540
Spliceosome [BR:
pcot03041
]
Complex C
Other components
Complex C specific factors
PCOAH_00054540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_3
RRM_7
RRM_8
RBD_DEAH11
BRAP2
Motif
Other DBs
NCBI-GeneID:
30912188
NCBI-ProteinID:
XP_019917795
UniProt:
A0A1B1E834
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All DBs
Position
14:complement(<1526670..>1529285)
Genome browser
AA seq
871 aa
AA seq
DB search
MLATGTNIMHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA
YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL
FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI
KRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYAD
SESAKNAMENLNGKKITDDGQIDHTYDAKKEEAESGSAGINGGAGNASADANGAEVEGGK
AAVDAKGDNKAATAGEAGKSGEETEGAANTTAATSESAKAKEGNNDESDDKANEASGATS
TDAAANAKEDAGNSAGANAAAQGESTNAISKKESGSENADSPNILYVGPHQSRARRHAIL
KAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGF
GFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNAL
NSPMQYPNPQSPQMQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLN
FNANLRGQMNQMRFYAQGGANMMNNSMNQNKVNSQLHPGHQYPNALGQANPQQQNMNAPG
QHNNNQPMQQQPGNNQMLNNNMRNMNNRAGRNMGGGNMGNMPNQKQIPLNMVGKQNTAQA
NQMNHQGPPPPQQQTQQPSQQQQTQQKAAQQMQQQVPPNGNFKFTSQARNRMEMPNKNAN
KVNPINNMNVNFNNNSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLE
MDNSELLILLENEEQLKKKIDEALVVLQKAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctggccactggaacgaatattatgcacccaagtttttccaccgcctccctgtatgta
ggggacctaaatgaggacgtgaccgaggcagtcctgtacgaaattttcaacaccgttgga
catgtgtcatccataagagtatgtcgagacagcgtgacaagaaaatcacttggttacgca
tatgtgaattaccacaacttagcagacgcggaaagagcattggacacattaaactataca
aacattaagggacagccagctagactcatgtggagtcacagagatccatctttgagaaaa
agtggtgcaggtaatatcttcgtgaaaaatctagacaagtctatagataataaggcgcta
tttgatacgttcagcatgtttggaaatattctctcatgtaaagttgcaacggatgaattt
ggaaagagcaaaagctatgggttcgttcactatgaggatgaggagagtgcaaaggaagcc
atcgaaaaggtgaatggaattcagctaggatcgaagaatgtatatgtaggccattttata
aaaaggtcggagagagctacaaacgatactaaatttacgaacctgtatgtgaagaatttc
ccagacagtgttactgaggcacatttgaagcagctctttagtccatatggagaaattacg
tccatgattgtgaagacggataataagaataggaaattttgcttcatcaattatgctgat
tcggagagtgcaaaaaatgctatggaaaatctgaacggaaagaagatcaccgatgatggg
cagatagatcatacctacgatgcgaaaaaggaagaagcagagagtggaagtgcaggtata
aatggcggggctggcaacgctagtgcggacgctaatggggcagaagttgaaggcggtaaa
gcagcagtagatgcgaagggggacaacaaagctgctaccgctggtgaggctggcaaaagt
ggagaagaaactgaaggagcagctaacaccaccgcagcaacgtcagaatccgccaaggca
aaagaaggcaacaatgacgaatctgacgataaggccaatgaagcatcaggggccacttcc
acagatgcagctgccaacgcgaaggaagacgcaggaaatagcgctggagcaaatgcagcc
gcacaaggagaaagcacaaatgcaattagtaaaaaggaaagtggttcagagaacgcagac
agtcctaacatcctatatgtaggacctcatcagtcgagagccagaagacatgccattctg
aaggccaaatttgataacctcaacatggaaagtaaaaacaaacaccagggtgtaaatctg
tatataaaaaatttggacgatgcgattgacgaccaaacattgaaggaactgtttgaacca
tatggcaccataacctcagcaaaggtcatgagagacgacaaggaacaaagcaaagggttc
ggttttgtctgcttcgcacaacaagaagaagcaaacaaagcagtaacagaaatgcacctg
aaaatcatcaatggaaaacccctatacgttggtttggcagaaaagagagaacaaagatta
tctagactacaacaacgattccgcatgcaccccataaggcaccacatgaataatgcatta
aattctcccatgcaatacccaaacccacagtccccacagatgcagtttaatcagaacact
ttaaattatggtagacctgttttaactccatttaaccagaataacctcatttcctggaga
catcaacaagcggcacaacaacaagtggttcaccaacaggcagctcaacagcaactaaat
ttcaatgcgaatttaagaggacagatgaaccaaatgagattctacgcacaaggaggagcc
aacatgatgaataacagtatgaatcagaataaggttaactcccaactgcacccaggacac
caatatccgaacgcactaggacaagcaaatccacaacaacagaatatgaacgcaccagga
caacacaacaacaaccaaccgatgcaacaacagcctggaaacaatcaaatgttgaacaat
aatatgaggaacatgaacaacagagcgggtagaaatatgggaggaggaaatatgggaaac
atgccaaaccagaaacagatacctctcaacatggtaggtaagcagaacactgctcaggcc
aaccagatgaaccaccagggaccacctccaccacaacaacagacgcaacaaccatcacaa
caacaacagacacaacagaaggcggcccaacaaatgcaacaacaggtacctccaaatgga
aacttcaaattcacatcacaagcaagaaaccgtatggaaatgccaaacaaaaatgcaaat
aaagtgaacccaattaataacatgaacgtgaactttaacaacaactcgactttaactgct
gctgcgttggcgtctgcacctccctccatgcagaagcaagttttgggagaaaacttattc
cccctggttgcaaactaccacccaactttagctggaaaaatcacgggaatgatgttggag
atggacaactccgagctgctaattttgctggaaaatgaggagcagctgaagaagaaaatt
gacgaggcgcttgtcgtgctgcagaaggccaagtag
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