KEGG   Plasmodium coatneyi: PCOAH_00054540
Entry
PCOAH_00054540    CDS       T10133                                 
Name
(RefSeq) Polyadenylate-binding protein
  KO
K13126  polyadenylate-binding protein
Organism
pcot  Plasmodium coatneyi
Pathway
pcot03015  mRNA surveillance pathway
pcot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PCOAH_00054540
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PCOAH_00054540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcot03019]
    PCOAH_00054540
   03041 Spliceosome [BR:pcot03041]
    PCOAH_00054540
Messenger RNA biogenesis [BR:pcot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     PCOAH_00054540
   mRNA cycle factors
    Stress granule specific factors
     PCOAH_00054540
Spliceosome [BR:pcot03041]
 Complex C
  Other components
   Complex C specific factors
    PCOAH_00054540
SSDB
Motif
Pfam: RRM_1 MLLE RRM_10 RRM_occluded RRM_3 RRM_7 RRM_8 RBD_DEAH11 BRAP2
Other DBs
NCBI-GeneID: 30912188
NCBI-ProteinID: XP_019917795
UniProt: A0A1B1E834
LinkDB
Position
14:complement(<1526670..>1529285)
AA seq 871 aa
MLATGTNIMHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA
YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL
FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI
KRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYAD
SESAKNAMENLNGKKITDDGQIDHTYDAKKEEAESGSAGINGGAGNASADANGAEVEGGK
AAVDAKGDNKAATAGEAGKSGEETEGAANTTAATSESAKAKEGNNDESDDKANEASGATS
TDAAANAKEDAGNSAGANAAAQGESTNAISKKESGSENADSPNILYVGPHQSRARRHAIL
KAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGF
GFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNAL
NSPMQYPNPQSPQMQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLN
FNANLRGQMNQMRFYAQGGANMMNNSMNQNKVNSQLHPGHQYPNALGQANPQQQNMNAPG
QHNNNQPMQQQPGNNQMLNNNMRNMNNRAGRNMGGGNMGNMPNQKQIPLNMVGKQNTAQA
NQMNHQGPPPPQQQTQQPSQQQQTQQKAAQQMQQQVPPNGNFKFTSQARNRMEMPNKNAN
KVNPINNMNVNFNNNSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLE
MDNSELLILLENEEQLKKKIDEALVVLQKAK
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgctggccactggaacgaatattatgcacccaagtttttccaccgcctccctgtatgta
ggggacctaaatgaggacgtgaccgaggcagtcctgtacgaaattttcaacaccgttgga
catgtgtcatccataagagtatgtcgagacagcgtgacaagaaaatcacttggttacgca
tatgtgaattaccacaacttagcagacgcggaaagagcattggacacattaaactataca
aacattaagggacagccagctagactcatgtggagtcacagagatccatctttgagaaaa
agtggtgcaggtaatatcttcgtgaaaaatctagacaagtctatagataataaggcgcta
tttgatacgttcagcatgtttggaaatattctctcatgtaaagttgcaacggatgaattt
ggaaagagcaaaagctatgggttcgttcactatgaggatgaggagagtgcaaaggaagcc
atcgaaaaggtgaatggaattcagctaggatcgaagaatgtatatgtaggccattttata
aaaaggtcggagagagctacaaacgatactaaatttacgaacctgtatgtgaagaatttc
ccagacagtgttactgaggcacatttgaagcagctctttagtccatatggagaaattacg
tccatgattgtgaagacggataataagaataggaaattttgcttcatcaattatgctgat
tcggagagtgcaaaaaatgctatggaaaatctgaacggaaagaagatcaccgatgatggg
cagatagatcatacctacgatgcgaaaaaggaagaagcagagagtggaagtgcaggtata
aatggcggggctggcaacgctagtgcggacgctaatggggcagaagttgaaggcggtaaa
gcagcagtagatgcgaagggggacaacaaagctgctaccgctggtgaggctggcaaaagt
ggagaagaaactgaaggagcagctaacaccaccgcagcaacgtcagaatccgccaaggca
aaagaaggcaacaatgacgaatctgacgataaggccaatgaagcatcaggggccacttcc
acagatgcagctgccaacgcgaaggaagacgcaggaaatagcgctggagcaaatgcagcc
gcacaaggagaaagcacaaatgcaattagtaaaaaggaaagtggttcagagaacgcagac
agtcctaacatcctatatgtaggacctcatcagtcgagagccagaagacatgccattctg
aaggccaaatttgataacctcaacatggaaagtaaaaacaaacaccagggtgtaaatctg
tatataaaaaatttggacgatgcgattgacgaccaaacattgaaggaactgtttgaacca
tatggcaccataacctcagcaaaggtcatgagagacgacaaggaacaaagcaaagggttc
ggttttgtctgcttcgcacaacaagaagaagcaaacaaagcagtaacagaaatgcacctg
aaaatcatcaatggaaaacccctatacgttggtttggcagaaaagagagaacaaagatta
tctagactacaacaacgattccgcatgcaccccataaggcaccacatgaataatgcatta
aattctcccatgcaatacccaaacccacagtccccacagatgcagtttaatcagaacact
ttaaattatggtagacctgttttaactccatttaaccagaataacctcatttcctggaga
catcaacaagcggcacaacaacaagtggttcaccaacaggcagctcaacagcaactaaat
ttcaatgcgaatttaagaggacagatgaaccaaatgagattctacgcacaaggaggagcc
aacatgatgaataacagtatgaatcagaataaggttaactcccaactgcacccaggacac
caatatccgaacgcactaggacaagcaaatccacaacaacagaatatgaacgcaccagga
caacacaacaacaaccaaccgatgcaacaacagcctggaaacaatcaaatgttgaacaat
aatatgaggaacatgaacaacagagcgggtagaaatatgggaggaggaaatatgggaaac
atgccaaaccagaaacagatacctctcaacatggtaggtaagcagaacactgctcaggcc
aaccagatgaaccaccagggaccacctccaccacaacaacagacgcaacaaccatcacaa
caacaacagacacaacagaaggcggcccaacaaatgcaacaacaggtacctccaaatgga
aacttcaaattcacatcacaagcaagaaaccgtatggaaatgccaaacaaaaatgcaaat
aaagtgaacccaattaataacatgaacgtgaactttaacaacaactcgactttaactgct
gctgcgttggcgtctgcacctccctccatgcagaagcaagttttgggagaaaacttattc
cccctggttgcaaactaccacccaactttagctggaaaaatcacgggaatgatgttggag
atggacaactccgagctgctaattttgctggaaaatgaggagcagctgaagaagaaaatt
gacgaggcgcttgtcgtgctgcagaaggccaagtag

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