Prevotella communis: L6468_06725
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Entry
L6468_06725 CDS
T09070
Name
(GenBank) chromophore lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcou
Prevotella communis
Pathway
pcou00040
Pentose and glucuronate interconversions
pcou01100
Metabolic pathways
pcou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L6468_06725
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L6468_06725
Enzymes [BR:
pcou01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L6468_06725
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UKK63441
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Position
1696435..1697469
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AA seq
344 aa
AA seq
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MSCFITACSDDDSPSENKIISSTYDSLKPIGFGENTTGGNNQKVIVVTTASQLQSAVSGT
NQATVYVQGNISLDSMLLVGSNKSIIGLQGATISNLNRSEKAGIFLLKGSRNVIIRNLTL
KGPGAYDIDANYSDNICLVGAKNVWVDHCDIQDGIDGNFDIVEGSDSICVSWTRFHYLIE
PMAGGSGGSDDHRNCNLIGNSNNTADIDEGHLNCTFICCWWGEGCSERCPRVRFGKVHVV
NCLYDGDNYKYCIGYGVYSNIYVEKCAFVSEKAKQNALKDYRNSKDFNIKVVDCLGIDDV
ELSQGNYKQFIPTYDYKTFDAEKVESILKKDDYGAGATLKISRP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgttttatcactgcttgttctgatgacgatagtccgtcagagaacaagattatc
tcttcaacctacgacagtctgaaacctataggcttcggtgagaacactactggtggtaac
aaccaaaaagttatagtggtaacaactgcttcacaactgcaatcagccgtgagtggtacc
aaccaggcaaccgtatatgtgcagggtaatatcagtctcgactcaatgcttttagttggt
tccaataagtcaattataggtcttcagggtgccaccatcagtaacctgaaccgtagcgaa
aaagctggaatattccttttgaaaggcagtaggaatgtcattatacgcaatctgactctg
aaaggacctggtgcctatgatattgatgctaactatagtgataacatctgcttggtaggt
gccaagaacgtgtgggtggatcactgtgatatacaggatggcattgatggtaatttcgac
atagtggaaggttctgatagtatctgcgtcagttggacacgtttccattatcttattgaa
ccgatggctggaggcagcggtggaagtgatgatcatcgcaattgtaacctgataggtaat
agtaataatacagctgatatcgatgaaggtcatctcaactgtacgtttatttgttgctgg
tggggcgagggatgttctgaacgttgtccgcgcgttcgttttggtaaggtacatgtggta
aactgtttatacgacggtgataattataaatactgtataggttatggtgtctattctaat
atctatgtagagaaatgcgctttcgtctctgagaaagcaaagcagaatgccctgaaagat
tatcgtaacagcaaggattttaatatcaaggttgtggactgccttggtatagatgacgta
gaactgtctcagggtaattataagcagtttatacctacctatgattataagaccttcgat
gcagagaaagtagaatctatcctgaaaaaggatgactatggcgctggtgccactctcaaa
atatcacgcccataa
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