Prevotella communis: L6468_09975
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Entry
L6468_09975 CDS
T09070
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pcou
Prevotella communis
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcou03019
]
L6468_09975
03009 Ribosome biogenesis [BR:
pcou03009
]
L6468_09975
Messenger RNA biogenesis [BR:
pcou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L6468_09975
Ribosome biogenesis [BR:
pcou03009
]
Prokaryotic type
rRNA processing factors
L6468_09975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DnaJ_CXXCXGXG
DUF5344
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
UKK61316
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All DBs
Position
2384038..2385615
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AA seq
525 aa
AA seq
DB search
MTSEVIIDARPKEISIALLEDKCLVEYQNEPREASYAVGNIYVGKVRKLMPGLNACFVDV
GSEKDAFLHYLDLGLQFSSYEKYLKQVASDRKKLYPIQKATIQPTLPKEGSIQNILKVGQ
EIMVQVVKEPINTKGPRLTCELSFAGRYMVLIPFGDKVSVSSKIKRGEERSRLKQLVQSM
KPKNFGVIVRTVAEGKKAAELDQELKVLLKRWEDAITKVQKTTERPQLVFEEQTRAVALL
RDLFNPTYDGIHVNDPEIYNQIHDYVSLIAPEKASIVKLYKGNVPIFDNFDVTKQIKSGF
GRTVNYKRGAYLIIEHTEAMHVVDVNSGTRIKKENGQEANALETNLGAADELARQLRLRD
MGGIIVVDFIDMNLAEDRQLLYERMCENMKKDRARHNILPLSKFGLMQITRQRVRPAMDV
AVEESCPTCHGTGKIKSSILFTDQLESKIDRLVNKIGIKRFTLHVHPYVAAFINKGVFSL
KRRWQLKYGLGIRIIPNQKMAFLQYEFYDANRQFIDMQEENEVSK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgaagttatcattgatgcgcgccccaaagaaatctccatcgcattgttggaa
gacaaatgcctggtggagtatcagaacgagccccgcgaggcctcgtatgctgtgggcaac
atttatgttggcaaggttcggaaactgatgccaggactcaacgcttgcttcgttgatgtt
ggttctgagaaagatgcttttctgcattatcttgatttaggacttcaattcagctcttac
gagaaatacctgaaacaggtagcaagtgacagaaagaaactctatcccattcagaaagcc
actatccagcctacccttcccaaggaaggaagtattcaaaatattctgaaggttggacag
gaaatcatggttcaagtagtcaaggagcccatcaataccaagggtccccgactcacctgc
gaactaagttttgccgggcgctacatggtattgataccttttggagataaggtttctgta
tctagtaaaattaaacgtggagaagagcgtagccgactgaagcagctggtacaaagcatg
aagcccaagaattttggcgtcatcgtaagaaccgttgcagaaggaaagaaagctgctgaa
ctcgaccaggaactgaaagtactcttgaaacgatgggaagacgccatcaccaaggtacag
aagacgacagaacgtccacagctggtctttgaagagcagacaagagccgttgcattgctg
cgcgatttgttcaaccccacctatgacggcatccatgttaacgatcctgagatctacaac
cagatccatgattacgtctctttgattgccccagaaaaagcaagcattgtcaagttgtac
aaaggcaatgtgcccattttcgacaatttcgacgtaaccaagcagattaagtctggtttt
ggacgtaccgttaactacaagcgcggcgcatacctcattattgaacacacagaggctatg
cacgtggtcgacgtcaacagtggtacacgtatcaagaaagaaaacggacaggaagccaac
gccctggagaccaacctcggtgcagccgacgagctggcacgccagttgcgactccgcgat
atgggtggtatcattgtcgtagactttatcgacatgaacctggcagaggaccgtcagctg
ctctacgaacgtatgtgcgagaacatgaagaaagaccgtgctcgccataacatcctgcca
ttatcaaagttcgggctgatgcagattacgcgtcaacgcgtgcgtccggccatggatgtt
gccgtagaggagagttgtcccacctgtcatggcactggaaagattaaatccagcattctg
ttcacagaccagttagagagcaaaattgaccgtcttgtcaacaagataggcatcaagcgt
ttcacactccatgtccatccttatgttgccgcattcatcaataaaggcgtattctcattg
aaacgccgctggcaactgaaatacggattgggcattcgcatcattcctaaccagaagatg
gccttcctgcagtacgagttctacgatgcaaaccggcagttcatcgatatgcaggaggaa
aacgaagtgagcaagtaa
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