Prevotella communis: L6468_12750
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Entry
L6468_12750 CDS
T09070
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pcou
Prevotella communis
Pathway
pcou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L6468_12750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcou03400
]
L6468_12750
DNA repair and recombination proteins [BR:
pcou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
L6468_12750
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
GIT1_C
Motif
Other DBs
NCBI-ProteinID:
UKK61832
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Position
3073861..3076437
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AA seq
858 aa
AA seq
DB search
MIYPNNFENKIGFDDIRTLLKERCQSSLGRNMVDELAFSSDADEVNEWLQQANEFRRLKE
TTDDFPMQYFFDMRESIARIRLTGTHLEENEVFDLRRSLETISNIVIYLNKGNASEDEEK
VTYTYPALQRLTTDIMTFPAMIRRIDSILDKYGKIKDGASMTLASIRHELQKTEGSISRT
LYTILHAAQRDGLVDKDAAPTMRDGRLMIPVAPGLKRKINGIVHDESATGKTVFIEPAEV
VEANNRVRELEAEERREVIRILTVFTDEVRPHVKEILDSYRFLAIIDLIQAKAAFAQLTK
AFEPKVENKPHLDWIRAIHPLLQLSLEKQGKKVVPLDILLEQDKRLLIISGPNAGGKSVC
LKTVGLLQYMLQCGLPIPIGDRSTCGIFKNIMIDIGDEQSIEDDLSTYSSHLMNMKQMIK
NCDAHTILLIDEFGGGTEPMIGGAIAEAVLKQFWQKKAFGVITTHYQNLKHFADDHEGVV
NGAMLYDRHQMQALFQLSIGQPGSSFAIEIARKTGLPEEVIKDASDIVGQDYIQSDKYLQ
DIVRDKRYWEGKRQTIHQHEKNLEGHIQRYETNLEEIERERKQILKRAQQQAEELLAETN
RKIENAIREIREAQAEKERTREIREELQEFRQQVQSDDTRGLMSEEEFARKLRQMEERKA
RKGQRKAEKAQKKEESDKRQQTFGAERNSANDLNRPLQKGDTVRIKGLNTIGTVENIQGK
QITVIFGDVRTKMKAEQLERCDKGKVKSEDTSAANKHAGLAILTSKMTRATMEDRKQNFH
QDIDVRGMRGDEAIDAVMHFIDDAILIGMSRVRILHGTGTGVLRQLIRQYLRTIPNVSHF
RDEHVQFGGAGITVVDID
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccctaataactttgaaaataagataggattcgacgatatccgtacactattg
aaggaacggtgtcagagttcgttgggtcgcaatatggtggacgagttggcattttcttct
gatgccgacgaagtaaacgagtggttgcagcaagccaatgagttccgtcgcctgaaagag
acgactgacgatttccccatgcagtatttcttcgacatgcgcgagtcaatcgcacgcatc
cgtctgacaggcacccatctggaggaaaacgaagtcttcgacctgcgccgctcactggag
accatcagcaatattgtcatctatctgaataaaggaaacgcatccgaggacgaagagaag
gtgacctacacttaccctgccctgcagcgcctgactaccgacatcatgacgttccctgcc
atgatccgtcgcatagactccatcctggataaatatggtaaaatcaaggacggcgcctca
atgacgctggccagcatacgccacgaactgcaaaagaccgagggcagcatctcacgcacc
ctctatacgatactgcatgccgcccagcgcgacggactggtagacaaggacgctgcgccc
accatgcgcgacggtcgtctgatgattcccgtagcccctggtctgaaacgtaagatcaat
ggtattgttcacgatgagagtgctacaggaaagaccgtcttcatagaacctgccgaggtc
gtggaagccaacaaccgcgtacgcgaactcgaagccgaggagcgtcgcgaggtaatccgt
atcctcaccgtcttcaccgacgaggtacgtccccacgtcaaggagattcttgattcctac
cgtttcctggctatcatcgacctgattcaggcgaaggccgcctttgcccaactgacaaaa
gcctttgagcccaaggtagagaacaagccgcatctcgactggatccgtgccattcacccc
ctgctccagttgtcactggagaaacaaggaaagaaagtggtgccccttgatatcctcctc
gaacaggacaagcgcctgctcattatctcaggtcccaatgccggtggtaaatccgtgtgc
ctgaagaccgttggactgctgcaatatatgttacaatgcggactgcccattcccattggc
gaccgttccacctgcggcatcttcaagaatatcatgattgatatcggtgacgaacagagc
atcgaggacgacctgtccacctattccagtcatctgatgaacatgaagcagatgatcaag
aactgcgatgcccacaccatattattaatagacgagtttggtggcggtacagaacccatg
attggcggcgccattgccgaggccgtcctgaagcagttctggcagaagaaagccttcggc
gtgattaccacccactatcagaacctgaagcatttcgccgacgaccacgagggtgttgtc
aacggtgcgatgctctacgaccgtcaccagatgcaggccctgttccagctcagtatcggt
cagcccggttcctcgtttgccatcgagatagcccgcaagaccggcctgcctgaggaagtc
atcaaggacgcctccgacattgtaggccaggactatatccagagcgacaaatacctgcag
gacatcgtacgcgacaaacgttactgggaaggcaagcgccagaccatccaccagcacgag
aagaacctcgaaggacatatccagcgctatgagaccaacctcgaggagattgagcgcgaa
cgcaagcagatcctgaagcgcgcccaacagcaagctgaggaactgctggccgagaccaac
cgtaagattgagaatgccatccgcgagattcgtgaggcgcaggctgagaaagagcgtacc
cgcgagattcgcgaagaactgcaggaattccgtcagcaggtgcagagcgacgacacccgc
ggactgatgagcgaggaagagtttgccaggaaacttcgccagatggaagagcgcaaggca
cgcaaggggcagcgcaaggccgagaaagcacagaagaaggaggagagcgacaagcgccaa
cagaccttcggtgccgaacgcaacagcgccaacgacctcaaccgtcccctccagaagggt
gacaccgtgcgtatcaaaggtctcaacaccattggtacagtggaaaacatccaaggcaag
cagatcaccgttatctttggcgatgtgcgcacgaagatgaaggccgaacagctggagaga
tgcgacaagggtaaggtgaagagcgaggacacctccgcagcaaacaaacatgccggtctg
gctatcctgacctcgaagatgacgcgtgccaccatggaagaccgcaagcagaatttccat
caggatatcgatgtgcgcggcatgcgtggcgacgaggccatagatgccgtgatgcacttc
atcgacgatgctatattaataggtatgtcacgcgtgcgtatcctccacggcacgggcacc
ggcgtactgcgccagctcatccgccagtacctccgcactatccccaatgtgagtcatttc
cgcgacgaacacgtacagtttggcggtgccggcatcaccgttgtggacatagactaa
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