KEGG   Pyrus communis (pear): 137707608
Entry
137707608         CDS       T10779                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03420  Nucleotide excision repair
pcox04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    137707608
  09124 Replication and repair
   03420 Nucleotide excision repair
    137707608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pcox03051]
    137707608
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137707608
Proteasome [BR:pcox03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    137707608
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      137707608
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 MmeI_C UBA_RAD5A TECR_N
Other DBs
NCBI-GeneID: 137707608
NCBI-ProteinID: XP_068302616
LinkDB
Position
11:4986088..4991819
AA seq 369 aa
MKLTVKTLKGSHFEIRVQPTDAVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKNKTSGLAGSSSSQPASTNPPTTPPTTNSTNRTEAPIQEPPLQST
TSAPDTSSAHSDTYGQAASTLVAGTNLEQTIQQIMDMGGGNWDKETVTRALRAAYNNPER
AVDYLYSSIPETTEVAVPVGNFPASQATDVAPVSGAPNSAPLNMFPQETLSGAGAGALGS
LDFLRNNRQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHTEFLQLINEPVEGS
EGDIFDQPDGPDQDLPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYL
LENAGDFED
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagaccctcaagggcagccatttcgaaattagggttcagcccact
gacgccgttatggctgtgaagaagaacattgaggatatacaaggaaaagataattaccca
tgtggacagcagttactgattcacaatgggaaggtcttgaaagacgaaactacattggct
gacaacaaggtcacagaagacggttttcttgttgtcatgcttagcaagaataaaacttca
ggcttagcagggtcttcttcttctcagcctgcctctacaaatcctcctacaactccacca
accacaaattctacaaacagaactgaagctcccatacaagaaccacccttgcagagtacc
acatctgctccagacacttctagtgcgcatagtgatacctatggtcaagctgcttcaact
ttagttgctggtactaatcttgagcagactattcaacaaataatggatatgggtggtggc
aactgggacaaagaaacagttacacgtgcattacgagcagcttataacaatccggagcga
gcagtggactacttgtactctagtataccagaaacaacagaagttgcagttcctgtaggt
aatttccctgcaagtcaggcaactgatgttgcccccgtctctggagcgcctaactctgct
cctttgaatatgtttcctcaggaaacactctctggtgctggcgctggggcccttggatcc
ctcgacttccttaggaataatcgccagttccaagcgctgcgctcaatggtgcaatcaaac
ccacaaattttgcagcccatgctgcaggaactcggaaagcaaaacccccagcttttaaga
ttaattcaggagcaccatactgagttccttcagttaataaatgaacccgttgagggttct
gaaggtgacatatttgatcagcctgacggtcctgaccaagatttgcctcatgccatcaat
gtaacccctgccgagcaggaggccattgaacgacttgaggcgatgggatttgacagagcg
ttggtcattgaggcttttctggcatgcgatcgcaacgaggaactggcagccaactatcta
ttggagaacgctggagatttcgaggactga

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