Pyrus communis (pear): 137707724
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Entry
137707724 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137707724
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137707724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
137707724
NCBI-ProteinID:
XP_068302729
LinkDB
All DBs
Position
11:7599212..7619477
Genome browser
AA seq
2724 aa
AA seq
DB search
MATLSQAQAVKSLNKSPGRRRFVFKNFSERLDDVEIDVFRSLDKVKSEPHEGSTFFRDCL
IEWRELNTAEDFISFYEQMMPLVQTLPLILLHKETIISELVSRLQMDARLSLEPILTLIA
ALSRDLLEDFIPFLPRIADSLVSLLESGTDREPEIIEQIFTSWSSIMMYLQKYLVQKIKH
ILKVTVKLRYYPKYHIQKFMAEAVSFLLRNAPFEQLKEGVRKIMFEVVKKSTDTRKEGVS
KLLYFVMRGTSSRFHSRAERVLHFLMDDLILCIGEQFNEGSETVLEVLKSALESLCVDLD
SKELNLMFNCLYREITDSVINGGVERLSRLLSLLVSTVQVKNGQRVSDYQQMIEIVGLVM
PKGIPMTEESSSDVVDKLLELMLCILRGLHNLSDMSTISSCSLQWAPVFDLKNPSLLGFV
RELLKEDVCIVNIFRANILRAMNDLIETSQEDVIYLLLTFCEKQQTEIQSLTFLDETPER
VSRIQDFLRGTINNWVGVLKGIGNGDSSSTIILEVDLALLWGTINCFPQVVESENDLSLL
KDLINAYDQILMIEADNVAGFPKHTWESLIGATLNSYYKMIRGKKSELDETSRFLHLGKR
HKSCAQVLVAVADFLDSVYGRSMMEGDTESRTYHPELKADMAVEALDIFADNLCQSDREI
RASTLRILCHFETLNCNTFTEDYPVAKKMRTEVSPTCHVDKHSLNVLALLLSIESTPLSI
STSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIGIFHNRFSYLWNPASECLAVLISQN
IGLVWENFVNYFEQCQSRFQASFDQIDKVNSGTTNKSIGLLGHFDLCVNSTSTSTPSAAV
LSSLLQSLQRIPILIESKSRQILPLFLKFVGYSYEDFRSCSIGSFNASVCRGKEWKGVLK
EWLNLLKLMHNLKSFYQNQFLKDVLQIRLLDENDDEIQTKVLDCLFIWKDDFLLPYCQQL
KNLASFHNLREELTTWSLSRESNLIEEHHRAYLVPIVIRLLMPKVRKLKKHANQKHSGVN
HRKSVLGFISQVDVEELPLFFALLVKPLQIVPMGSDGAANWFWTLPNVSLAEFQASHFLK
YFTVSSISALSWKKRSGFLHVIEDIIGVFDILRVDPFLDFLLGCVARLLESCSLSIEVAK
AKEAGKAKGSSLENNLDVNRTLLGKDSAVETNVSISPALGQLRDLRSLCLKIISFVLNKY
EDRDFSSEFWDLFFVSVKPLIDRFKQEGSSGQKPSSLFSCFLALSRSQKLVPLLCREQKL
VPDILSILTVTSTSEAIVSCVLKFVDNLLTLDHEWGDEDSAVKGVILPNLEALIDNLHCL
FQSNNAAKRKLYKHPGETEKRIFQFLPKYIEHALPARKFLDILLPILANGAQNSDFCFEA
VQVIRDMVPILGNAITNKILNAVSPLLTSTDLDKRVFICDLLEAVARADPSVQFVAKLLQ
DLNATSVTELGSLDYDKVVNAYEKISVDIFYTVPEDHALVILSHCVYDMSSEELILRHSA
YNSLRSFVEFAALILGQVDHCEMPDKMSASDDHCWTRACIQRITNKFLLKHMGNALKRGT
SVRKEWVDLLRQMVKNLPEVANLGSLKDLCDDDAEIDFFNNIVHLQKHRRARALTRFRNV
ISTSYMPEGITKKVFVPLFFNMLLEEHEGKGEHVKNMCIEALASISSHMEWNSYYSLLMR
CFNEMNKNPNKQKLLLRLICSILDKFHFSDAKDSLDNDSNTGTTDTGSTILRKCSNSVSI
NEIQTCLQKVVLPKIQKLLSDSEKVNANISLATLRVLRLLPGDVMDSQLPSIVHRVSNFL
KNRLESIRDEARSALAACLKELGLEYLHFIVKVLRATLKRGYELHVLGYTLNFILSKFLV
TPISGKLDYCLEDLLCIATNDILGDVAEEKDVEKIASKMKETKKQKSFETLKLISQSITF
KSHALKLLSPVTAQFEKHLTPKTKTKLESMLTHIGAGIECNPTVDQTDLFIFVHGLIEDG
IKEENGQTENLFITWVNGRRRNFMSGKDISSGGVSGGKSVCSHLISVFALGIFLKRIKNV
KLGKADEQMLSMLDPFVLLLGKCLKSKYEDVVSASLRCLTRLVRLPLPAIGSQADSIKAA
LFGIAGSTGNTGGSQMESCLRLLTELLRGTKITLSSDQLHLLIQLPLFVDLESNPSFVAL
SLLKAIVNRRLVVPEIYDLVTRVANLMVTSQVEPIRHKCSKILLQFLLEYRLSTKRLQQH
LDFLLSNLRYEHSSGRKTVLEMLHTIIAKFPQNVVDEQSQTFFVHLVICLANDQDNEVRS
LAGVAIKCLIGYISSHSFRSILEYSLSWYLGGKQQLWSAAAQVLGLLVEVMDKEFQKHVN
KLLPVEDVEKEFLKHINRILPVTKSILLSAIDTVTDEQLDFSNETSIPLWKEAYYSLVML
EKMLHQFRSLCFDRDLEDIWAAICELLLHPHMWLRCISSRLVALYFDATKAASKDDGKPL
GIYYLIRPSRLFMIAASLCCQMKTQLNDDAASNLITENLAFSVCHVHSLIGQTECADPHQ
FWSNLEQHEQAHFLRAFELLDARKGRSMFLSLTSGICDPNDESASKNIRYLLVSNLLKKM
GKTALQMEAIQMKIVFDSFQKVSSYLSEEDCRLYAYEILLPLYKVCEGFSGRVIHENTKQ
LAQEVTDSIRKKLGTQKFVLVYGDIRKNLKAKRDKRKNEEKRMAVVDPMRNAKRKLRIAE
KHRANKKRKIMSMKMGRWTHSKPK
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggccactctttcccaagctcaggccgtcaagtccctcaacaaatcccccggacgccgc
cgtttcgttttcaagaatttctctgagagacttgatgatgtcgaaatcgatgttttccga
agcctcgataaagttaagtcggagccgcatgagggctctacttttttccgggactgcctc
atcgaatggagggaactgaacacggctgaggatttcatctctttctatgagcaaatgatg
ccgttggtccaaacgttgcctttgattctgttgcacaaggaaaccataatctcagaactc
gtttcgagattacagatggatgcaaggctgtcgcttgagcccattctcacgttaatcgcc
gctctgtcgagagatctcctggaggactttatccctttcttgccgaggattgctgattct
ctagtgtctcttctagaaagtggtacagatagggagccagagatcattgagcagatcttt
acatcttggtcatctattatgatgtacttacaaaaatatcttgtacaaaagattaagcat
atactaaaggttaccgtaaaattgaggtactatccaaaatatcacatccaaaaatttatg
gcagaagcggtctcattcttgctgagaaatgcaccttttgaacaacttaaagaaggtgtc
agaaagatcatgtttgaagttgtgaagaaatcaactgatactagaaaagagggagtcagt
aaattactgtattttgtcatgagaggaacctcatcaaggttccattctagagctgagaga
gtgttgcatttcctgatggacgacttgatactttgcattggtgaacaattcaacgaaggt
tcagagactgttcttgaagtcttaaagtctgcgttagaaagtttatgtgtggatttggac
tccaaggaattgaacttaatgttcaattgcttatatcgggaaataactgactctgtgatt
aatggaggtgttgaacgtttaagccgcctgttgtcgttgcttgtttctactgtgcaagtt
aagaatggccaaagggtttctgattaccaacaaatgattgaaattgtggggttggtcatg
cctaagggcattccaatgacagaggagtcttcatctgatgttgttgataagcttttagag
ttaatgctctgtattcttaggggactgcacaatttaagtgatatgtcaaccatctctagc
tgttcattgcagtgggctcctgtatttgatctaaagaacccaagcttgttgggttttgtt
cgagaattattaaaagaggatgtttgcattgtaaatatcttcagagctaacattttaagg
gcgatgaatgatttaatagaaacttcccaggaagatgttatttatttgttactcaccttc
tgtgaaaaacagcaaacggaaatccaaagcttgaccttcttagatgaaacacctgaaaga
gtttcaaggattcaagattttctgcgtgggactatcaacaactgggttggggttttaaag
ggtattggaaatggggactcatcatccacaataattcttgaagttgacttggctctgctg
tggggaaccatcaactgctttccccaagtagtagaatctgaaaatgatttatccttgtta
aaggatttaataaatgcatatgatcaaattctgatgattgaagctgacaatgttgcaggt
tttcctaagcacacttgggagagcctaattggtgctaccctgaattcctattacaaaatg
atacgtggtaaaaaatctgagcttgacgaaacaagcagatttttgcatcttggaaagaga
cacaaatcatgtgcacaagtgttggttgctgttgctgattttttggattcggtgtacggt
aggtctatgatggaaggagacaccgagtctagaacatatcatccagaattaaaagcagac
atggctgtagaggctttagacatatttgctgataatttatgccagtcagacagagagatt
cgcgcttcaactcttcgaatattgtgccactttgaaactctaaattgcaatactttcaca
gaggattacccagttgcaaagaaaatgagaactgaagtttctccaacttgtcatgtggat
aaacacagcttaaatgttcttgctctccttctctccattgagtcaactcctctttcaatt
tctaccagcaggaaagttactctcttgatttctagaatacagatggccctctctgctggt
agaatagctgaagcttatctgccccttgttttgaatgggatgattggtatcttccataac
cggtttagttacctttggaatcctgcatcagagtgccttgcagttctgattagccaaaac
attggacttgtgtgggaaaattttgttaattattttgaacaatgccaatcgagatttcaa
gcatccttcgatcaaattgacaaagtaaattctgggacgaccaacaagtcaattggcctg
ctcggacactttgatttgtgtgttaattccacatctactagtacaccttctgcggccgtg
ttatcttcattgctccagtctttacaaagaattccgatcctaattgaatccaagtctcgc
cagattttacctttgtttttgaagtttgtgggctacagttacgaagactttagaagctgc
agcatcgggtctttcaatgcaagtgtttgtagaggcaaagagtggaaaggtgtccttaaa
gaatggttaaacctgctgaaactgatgcacaaccttaagtccttctatcaaaatcagttc
cttaaagacgttttacaaattagacttttagatgaaaatgatgatgaaatacaaacaaag
gttcttgattgtctgttcatatggaaagatgatttcctgcttccatactgtcaacaattg
aaaaacctagccagctttcataatttgagagaggaattaacaacatggagtttatccaga
gagtccaatctaattgaggaacatcacagagcttacctggtgcctatagttatccgtctt
ctgatgcccaaagtccgcaagttgaagaaacatgctaatcagaagcattcaggagtaaat
catcggaagtcagttcttggtttcatatctcaagttgatgttgaagaacttcctcttttc
tttgcattgttggtaaagcctttgcaaattgttccaatgggaagtgatggtgctgcaaac
tggttttggactttgccaaatgtttctctggccgaatttcaggcatcgcatttcttaaaa
tatttcactgttagcagtatatcagccctgtcttggaagaaaagatctggttttctgcat
gtgatcgaagatatcattggagtttttgatatattgcgtgttgatccctttcttgatttt
cttctgggatgtgtcgcccggttattagaaagctgcagtttaagtattgaggtggcaaag
gccaaagaggcggggaaggccaagggatcttcattggaaaataatctggatgtgaaccgt
actttgcttggaaaagatagtgcagtggagactaatgtttcgatctccccagctttgggg
cagcttagggatctcaggtctttatgcctgaaaattatctccttcgttctcaacaagtat
gaagatcgtgattttagtagtgagttctgggacctattctttgtgtcagtcaagccttta
attgatcgtttcaagcaggaaggatctagcggccagaaacctagttcgctcttctcttgt
tttcttgcgctgtctagaagccaaaaacttgtaccactactttgcagggaacaaaaactt
gttcctgatatactctcaattctaacggtcacatcaacatctgaagctattgtatcttgt
gttctcaagtttgttgataacctgttgactcttgatcacgagtggggtgatgaagatagt
gctgtgaaaggagttatactcccaaaccttgaagcactcatcgataacctgcattgtctt
tttcaaagtaataatgctgccaagaggaaattatataaacacccaggagagacagagaaa
agaatttttcagttcttacctaagtatatagaacatgctttgccagccaggaaatttttg
gatatcttgcttccgattttagcgaatggagctcagaattcagatttctgttttgaagca
gtgcaagtaattcgtgatatggttccaatactggggaatgcgattacaaataaaattctt
aatgcagtatctccactacttacttctactgatctagataaacgtgtttttatttgtgat
cttcttgaggctgttgctagagcagacccttctgttcaatttgtggcaaaactgttacag
gacttgaatgcaacctctgttactgaactgggtagccttgattatgacaaagttgtcaat
gcttatgaaaagatcagtgttgatatcttctatacagtcccagaggatcatgcattagtc
attttgtctcattgtgtctatgacatgtcgtctgaagaattaatcttgaggcacagtgct
tacaattcattgcgctcatttgttgaatttgctgccctaattcttggccaagtagaccac
tgtgaaatgcctgacaagatgtcagcatctgatgatcattgttggaccagagcatgcatt
cagagaataacaaacaagtttcttttgaagcatatgggcaatgctttgaagagaggaact
tctgtcagaaaggaatgggttgatttactaagacaaatggtgaaaaatctaccagaagtg
gcaaatctgggttcattgaaggatctttgtgatgatgatgctgaaatagattttttcaac
aatatcgttcacctacagaaacataggagagcaagggcattgacacgctttaggaatgtt
atcagtaccagctatatgccagagggtatcacaaagaaagtgtttgtacccctttttttc
aatatgttgttggaggagcatgaaggaaaaggagaacatgtcaaaaatatgtgcatagag
gcccttgcttcgatttcgagtcacatggaatggaattcatactactcgttgttgatgaga
tgctttaatgagatgaacaagaatcctaataaacaaaagctccttctgcggctaatttgt
tccatcttggacaagtttcacttttcagatgccaaagactccttggacaatgattccaac
acagggaccactgatactgggtctacaatcttgcgtaagtgtagcaattctgtttcgata
aatgaaatacagacttgccttcaaaaagtcgtgctgcctaagatacaaaagttactgagt
gattctgaaaaggtcaatgctaacatcagtcttgctacactaagagtattaaggttgctt
cctggagatgtaatggactcacagctgcctagcattgttcatcgagtttcaaattttttg
aagaatcgattggaaagcatccgtgatgaagctaggtccgctttggctgcttgtttgaag
gagttggggctggaatacttgcattttatagtcaaggttttgcgagctaccttgaaacgg
ggatatgagttacatgtgctgggatacacactaaactttattttgtcgaagtttcttgtt
actccaattagtggaaaattggactactgtttggaagatctcctttgtattgcaacgaat
gatattcttggagatgttgctgaggaaaaagatgttgaaaagattgcttccaagatgaaa
gaaactaagaaacagaagtcttttgaaaccctgaaattgatttctcaaagcataacattc
aaaagccacgcgttgaagcttctgtcacctgttacagctcaattcgagaaacatttgaca
ccaaaaaccaagacaaaattggaaagtatgttaactcacataggtgctggtattgaatgc
aatccaactgttgaccagacagacctatttatattcgtacatggcctgatcgaagatgga
ataaaagaagaaaatggtcagactgagaatttgtttattacatgggtaaatggacgtcgg
cgaaattttatgagtggaaaagatatttcctcggggggtgtctcaggtggtaaatcagta
tgttctcatcttatttcagtttttgctcttgggatatttctgaaacgcataaagaatgtg
aaattgggaaaagctgatgaacaaatgttgtcgatgttggatccttttgtcttactgtta
gggaagtgcttgaaatccaagtatgaagatgttgtatctgcatcacttagatgcctcacc
cgactggtcaggttgcctttacctgccatcggatctcaggcagatagtattaaagccgcg
ctgtttggtattgctggaagtacgggtaatactggaggttctcaaatggagtcatgcctg
aggttgttaacagaacttctgcgcggcaccaaaatcactctttcctccgatcagttacat
ctgcttattcagcttccattgtttgttgatcttgaaagcaatccctcctttgttgctctt
tcacttctaaaggcaattgttaaccgcaggctagttgttcctgagatatatgatcttgta
acaagagttgcaaatttgatggtaacaagtcaagtagaaccaattcgtcacaagtgtagc
aagattttattgcaattcttacttgaatatcgtctctctacaaaacgtttgcaacaacat
ttggattttctgctgtcaaatctgaggtatgagcattcaagtggaaggaaaactgtgctt
gagatgctccacacaattattgctaaatttccacaaaacgttgtagatgagcagtcacag
accttttttgtccatttggtgatttgcttggctaatgatcaagataatgaagttcgttcc
ttggctggagttgctataaaatgtctcattggctatataagctcacattcatttcgttcc
attcttgagtacagcctatcttggtatttgggtgggaagcagcaattatggagcgctgca
gcacaggttttgggacttctggttgaagtcatggataaagaatttcagaagcatgtcaat
aaattattgccagttgaagacgtggagaaagaatttcttaagcatatcaacagaatattg
ccagtgactaagagtatcttactgtctgccattgatacagtcactgatgagcaactagac
ttttctaatgaaactagcattcctttgtggaaggaggcatattattcgttagttatgctg
gagaaaatgctgcatcagtttcgtagtttatgctttgatagggatcttgaggatatatgg
gcagcaatttgtgaattacttctgcatccacacatgtggttacgctgcatttccagtcgc
cttgtagctttgtactttgatgctaccaaagccgcctctaaagacgatggaaaaccatta
ggaatttactatcttattagaccaagtagacttttcatgatagctgcgtctctctgctgc
caaatgaagacacaactcaatgatgatgctgccagcaatctgattactgaaaatcttgcg
ttcagtgtttgtcatgtgcattcattgattggacaaacagagtgtgctgatccacatcaa
ttctggtccaaccttgaacagcatgagcaagcccattttcttcgagcttttgagttgctc
gatgctagaaaaggaaggagcatgtttttatcccttacctctggtatatgcgacccaaat
gatgaaagcgcctctaagaatatccgatacttgctcgtctctaacctgctcaaaaaaatg
ggcaagactgcccttcaaatggaggcaattcagatgaaaattgtctttgatagttttcaa
aaagtttcatcctatttaagtgaggaagactgccggctttatgcctatgaaatcttgctg
ccgttgtataaagtttgcgaaggattttctgggagagtgattcatgaaaatacgaagcag
ttagcacaagaagttactgacagcatacgaaagaaactaggcacccaaaagtttgtacta
gtttacggtgacatcaggaagaatctcaaggcgaaaagggataagaggaaaaacgaagaa
aagcgcatggctgtcgttgatcccatgcggaatgctaagaggaaactgaggatagcagag
aagcatcgggccaacaagaaaaggaaaataatgtcgatgaaaatggggaggtggacacat
tcgaagccaaagtaa
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integrated database retrieval system
