Pyrus communis (pear): 137707824
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Entry
137707824 CDS
T10779
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcox Pyrus communis (pear)
Pathway
pcox04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137707824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137707824
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137707824
Hops complex
137707824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Ank_2
Motif
Other DBs
NCBI-GeneID:
137707824
NCBI-ProteinID:
XP_068302847
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Position
11:17052801..17059141
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AA seq
840 aa
AA seq
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MANVSVAAEWQLLYNRYYRKPEIYRMSWKHVELNRNKVACAPFGGPIAVIRDDSKIVQLG
GESAQRKLRIFSSAGHLLGETIWKHPGGRLIGMAWTDDQNLVCLVQDGTVFRYTIHAELV
EPSISMGKECFERNVVDCVFWGNGVVCITETNQLFCISDFKNPNPIKLADPAIEDPPLCM
AVIEPQYTMSGNVEVLLGIGDACVLAVEEDGVQQLGLEVLRGPIQKMAVSRDGQWLASFT
HDGRLLVMTSNLNDILIEQECESALPPEQLSWCGMDTVLLYWDDMLLMMGPRGDPVRYFY
DEPIILIPECDGVRILSNSNMEFLQRVPDSTESIFKIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRPSLTEAVEACIDAAGHEFDVLRQRTLLRAASYGQAFCSNFQRDHIQEMCKTL
RVLNAVRHPDVGMPLSIQQYKLLTPAVLISRLINAYKHFLALRISEYLGMNQEMVIMHWA
CSKITASLAISDTNLLDILLDKLKLCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDTALMKAIESGDTDLVYLVLFHIWQKRQPLEFFGMIQARALARDLFIIYA
RCYKHEFLKDFFLSTGQLQEVAFLLWKESWEIGKNPMASRGSPLHGPRIKLIEKAHNLFV
ETKEYTFESKAAEEHAKLIRMQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACVDADEKGEALKYIP
KLTDPRERAESYARIGMAKEAADAASQAKDGELLGRLKMTFSQNAAASSIFDTLRDRFVS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtctcggttgccgcggagtggcagctcctctacaaccgctactaccgtaag
cccgaaatctaccgaatgagctggaagcacgtagagctcaaccgcaacaaggtcgcctgc
gcaccctttggcggccccatcgccgtcatccgagacgattccaagatcgtccaactcggc
ggcgaatcggcccagcggaagctccgcatcttcagttccgctggccatctcctcggcgag
acaatctggaaacacccgggcggccgattaatcggcatggcctggaccgacgaccagaac
ctagtctgcctcgtccaagatggcaccgttttccgctacaccatccatgcggagctcgtc
gagccaagtatctccatggggaaagagtgcttcgagcgaaacgtcgtggactgcgttttc
tggggaaacggcgtcgtttgcatcaccgagacgaatcagctgttctgcatttccgatttc
aagaacccgaacccgattaagcttgccgacccggcgatcgaggacccgcctctgtgtatg
gcggtgatcgagccgcagtacacgatgtcgggaaacgtggaggttctgctcgggatcgga
gatgcttgcgttttggctgtggaggaagacggggttcagcagctagggctggaggtgctc
cgcgggccgattcagaagatggcggtttcgagagacgggcagtggcttgcttccttcacg
cacgacggtcgtttgttggtgatgacttcgaatttgaacgatattctcattgagcaggaa
tgtgagtcggctcttcctccggaacagctatcttggtgtggaatggacactgtgctgctt
tattgggatgatatgcttttgatgatgggtcctagaggtgatccagtacgctatttttat
gatgaaccgataattcttattcccgagtgtgatggagtgaggatattatctaactcgaac
atggagtttctacaacgggtgcctgactccactgaatccatcttcaagattggaagtaca
tcgcctgcagctttgttgtatgatgctttggaccattttgacagacgaagtgccaaggca
gatgagaatttgcgactaatacgcccatccttgacggaggctgttgaagcatgtatcgat
gctgctggtcatgaatttgatgttctacgccaacgaacgctcctaagagctgcaagctat
ggccaagccttttgcagcaattttcaacgtgatcatattcaagagatgtgtaaaactttg
cgggtattaaatgctgttcggcatcctgacgttggaatgcctctaagtattcaacaatac
aagttacttacaccagcagttctgatcagtcgtttgatcaatgcctacaaacactttctg
gcactacggatatcagagtaccttggaatgaaccaagagatggtgatcatgcactgggca
tgttccaaaataacagcatccttagcaatttctgataccaatctccttgatattttgctt
gataagttgaaactatgcaaaggaatatcctatgcagcagttgctgctcatgcagataag
aatggccgccggaagctagctgccatgcttgttgaacatgaaccacgctcctccaaacag
gttcctctattgttgagcataggagaagaagatacagctttaatgaaagcaattgaaagt
ggtgatacagaccttgtttatcttgttctctttcatatctggcaaaagcgacaaccattg
gagttctttggaatgatacaagctagagctctggcacgcgatttgtttataatttatgca
cggtgctacaagcatgaattcttgaaggacttttttctatcaacaggacaacttcaagag
gtggctttccttctgtggaaagaatcttgggagattggaaaaaatccaatggctagcaga
ggatctccccttcatggtccacgcataaaactaattgagaaggcccataatcttttcgta
gaaactaaggaatatacctttgagtcgaaggctgctgaagaacatgcaaagcttataagg
atgcagcatgagttagaagtctcaacaaagcaggccatttttgttgactcgagtatcagt
gatacaattagaacttgtattgttctgggaaatcatcgagctgcaatgaaagtgaaaaca
gaattcaaggtttctgagaagagatggtattggctaaaagtttttgctttggctacaatc
cgagattgggatgccttggagaagttctcaaaggaaaagagaccgccaattggttacagg
ccatttgtggaggcatgtgttgatgcagatgagaaaggagaggctttgaaatatatccca
aaactcacagatcctcgggaaagagcggagtcttatgctcggattggcatggccaaggaa
gctgctgatgctgcctctcaggcgaaagatggtgaattgcttggtcgactcaaaatgact
ttctcacaaaatgctgctgcttcatcaatttttgatactcttagggaccgatttgtgtca
tag
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