KEGG   Pyrus communis (pear): 137707824
Entry
137707824         CDS       T10779                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
pcox  Pyrus communis (pear)
Pathway
pcox04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    137707824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcox04131]
    137707824
Membrane trafficking [BR:pcox04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    137707824
   Hops complex
    137707824
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st Ank_2
Other DBs
NCBI-GeneID: 137707824
NCBI-ProteinID: XP_068302847
LinkDB
Position
11:17052801..17059141
AA seq 840 aa
MANVSVAAEWQLLYNRYYRKPEIYRMSWKHVELNRNKVACAPFGGPIAVIRDDSKIVQLG
GESAQRKLRIFSSAGHLLGETIWKHPGGRLIGMAWTDDQNLVCLVQDGTVFRYTIHAELV
EPSISMGKECFERNVVDCVFWGNGVVCITETNQLFCISDFKNPNPIKLADPAIEDPPLCM
AVIEPQYTMSGNVEVLLGIGDACVLAVEEDGVQQLGLEVLRGPIQKMAVSRDGQWLASFT
HDGRLLVMTSNLNDILIEQECESALPPEQLSWCGMDTVLLYWDDMLLMMGPRGDPVRYFY
DEPIILIPECDGVRILSNSNMEFLQRVPDSTESIFKIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRPSLTEAVEACIDAAGHEFDVLRQRTLLRAASYGQAFCSNFQRDHIQEMCKTL
RVLNAVRHPDVGMPLSIQQYKLLTPAVLISRLINAYKHFLALRISEYLGMNQEMVIMHWA
CSKITASLAISDTNLLDILLDKLKLCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDTALMKAIESGDTDLVYLVLFHIWQKRQPLEFFGMIQARALARDLFIIYA
RCYKHEFLKDFFLSTGQLQEVAFLLWKESWEIGKNPMASRGSPLHGPRIKLIEKAHNLFV
ETKEYTFESKAAEEHAKLIRMQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACVDADEKGEALKYIP
KLTDPRERAESYARIGMAKEAADAASQAKDGELLGRLKMTFSQNAAASSIFDTLRDRFVS
NT seq 2523 nt   +upstreamnt  +downstreamnt
atggcgaacgtctcggttgccgcggagtggcagctcctctacaaccgctactaccgtaag
cccgaaatctaccgaatgagctggaagcacgtagagctcaaccgcaacaaggtcgcctgc
gcaccctttggcggccccatcgccgtcatccgagacgattccaagatcgtccaactcggc
ggcgaatcggcccagcggaagctccgcatcttcagttccgctggccatctcctcggcgag
acaatctggaaacacccgggcggccgattaatcggcatggcctggaccgacgaccagaac
ctagtctgcctcgtccaagatggcaccgttttccgctacaccatccatgcggagctcgtc
gagccaagtatctccatggggaaagagtgcttcgagcgaaacgtcgtggactgcgttttc
tggggaaacggcgtcgtttgcatcaccgagacgaatcagctgttctgcatttccgatttc
aagaacccgaacccgattaagcttgccgacccggcgatcgaggacccgcctctgtgtatg
gcggtgatcgagccgcagtacacgatgtcgggaaacgtggaggttctgctcgggatcgga
gatgcttgcgttttggctgtggaggaagacggggttcagcagctagggctggaggtgctc
cgcgggccgattcagaagatggcggtttcgagagacgggcagtggcttgcttccttcacg
cacgacggtcgtttgttggtgatgacttcgaatttgaacgatattctcattgagcaggaa
tgtgagtcggctcttcctccggaacagctatcttggtgtggaatggacactgtgctgctt
tattgggatgatatgcttttgatgatgggtcctagaggtgatccagtacgctatttttat
gatgaaccgataattcttattcccgagtgtgatggagtgaggatattatctaactcgaac
atggagtttctacaacgggtgcctgactccactgaatccatcttcaagattggaagtaca
tcgcctgcagctttgttgtatgatgctttggaccattttgacagacgaagtgccaaggca
gatgagaatttgcgactaatacgcccatccttgacggaggctgttgaagcatgtatcgat
gctgctggtcatgaatttgatgttctacgccaacgaacgctcctaagagctgcaagctat
ggccaagccttttgcagcaattttcaacgtgatcatattcaagagatgtgtaaaactttg
cgggtattaaatgctgttcggcatcctgacgttggaatgcctctaagtattcaacaatac
aagttacttacaccagcagttctgatcagtcgtttgatcaatgcctacaaacactttctg
gcactacggatatcagagtaccttggaatgaaccaagagatggtgatcatgcactgggca
tgttccaaaataacagcatccttagcaatttctgataccaatctccttgatattttgctt
gataagttgaaactatgcaaaggaatatcctatgcagcagttgctgctcatgcagataag
aatggccgccggaagctagctgccatgcttgttgaacatgaaccacgctcctccaaacag
gttcctctattgttgagcataggagaagaagatacagctttaatgaaagcaattgaaagt
ggtgatacagaccttgtttatcttgttctctttcatatctggcaaaagcgacaaccattg
gagttctttggaatgatacaagctagagctctggcacgcgatttgtttataatttatgca
cggtgctacaagcatgaattcttgaaggacttttttctatcaacaggacaacttcaagag
gtggctttccttctgtggaaagaatcttgggagattggaaaaaatccaatggctagcaga
ggatctccccttcatggtccacgcataaaactaattgagaaggcccataatcttttcgta
gaaactaaggaatatacctttgagtcgaaggctgctgaagaacatgcaaagcttataagg
atgcagcatgagttagaagtctcaacaaagcaggccatttttgttgactcgagtatcagt
gatacaattagaacttgtattgttctgggaaatcatcgagctgcaatgaaagtgaaaaca
gaattcaaggtttctgagaagagatggtattggctaaaagtttttgctttggctacaatc
cgagattgggatgccttggagaagttctcaaaggaaaagagaccgccaattggttacagg
ccatttgtggaggcatgtgttgatgcagatgagaaaggagaggctttgaaatatatccca
aaactcacagatcctcgggaaagagcggagtcttatgctcggattggcatggccaaggaa
gctgctgatgctgcctctcaggcgaaagatggtgaattgcttggtcgactcaaaatgact
ttctcacaaaatgctgctgcttcatcaatttttgatactcttagggaccgatttgtgtca
tag

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