Pyrus communis (pear): 137708024
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Entry
137708024 CDS
T10779
Name
(RefSeq) polyadenylate-binding protein 6-like
KO
K13126
polyadenylate-binding protein
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137708024
09123 Folding, sorting and degradation
03018 RNA degradation
137708024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137708024
03041 Spliceosome [BR:
pcox03041
]
137708024
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137708024
mRNA cycle factors
Stress granule specific factors
137708024
Spliceosome [BR:
pcox03041
]
Complex C
Other components
Complex C specific factors
137708024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RBD_DEAH11
RRM_RdRP1_2
RRM_7
RRM_5
RRM_3
xRRM
DUF7959
Motif
Other DBs
NCBI-GeneID:
137708024
NCBI-ProteinID:
XP_068303087
LinkDB
All DBs
Position
11:10124207..10127970
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AA seq
608 aa
AA seq
DB search
MAAELSDPKTPMPLPPPPSLLPTLPVRPPARVDPDIFSLYVGDLDPQVTEEDLLATFRFM
GPIASVRLCRDSHSGESLRYGYVNFYSHSHASKAMACLNHTELKGKTMRIMWSQRDSVPR
KTGLGNVFVKNLDPEITSTHLQDMFREFGTILSCKVAEQNGKSKGFGFVQFNKEESAVAA
VNALNDTIIKGKKLYVSKFVKKSDRIPAQDESKFTNLFVKNLAEHVTEDLLRELFSQYGS
VYSLAIMKDEKGKSKGFGFANFESPEEAKKAVEGMNGALLGSKHLFVGRAQKKAEREKFL
KCKEEMLNSEIKKLKSMNLYVKNLAESVDDIKLGEHCSAFGKILSAKVMRDGNGMSRGFG
FVCFSTLQEAAKALSNLNGAMLEGRKLYVAVAQSKDHRCKAMQDYYTLQLPQRSLQSPNW
PALHLVQYSVSPRPPTAPLLCPPVMYQSFGTNVDADYPSVLSRQAQWGSSNGNDNFQNKS
RTYANSSVHTNSGNHGGYEATGYRKKVYRQSGATAGSSRSATTDGRALLTEGSSTGNSNL
KTTPRDRHHSFVENLEPGRAVQITGTSGMLWELNSSEKAAAQVLKVANGTRTSADHHPVF
AKSGRYLS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagctgtcagaccctaaaaccccaatgccgctaccgccaccaccatcacta
ctgccgacgctaccagtacggccgccggcgcgggtcgatcctgatatattctctctgtat
gtgggcgacctggacccacaggtcaccgaggaagacctcctcgctacttttcgtttcatg
ggtcccatcgcctccgtccgtctctgccgtgactcccactccggcgagtccctccgctac
ggctatgtcaacttctactcccactcccacgcatccaaggctatggcttgtctgaatcac
actgagctgaaagggaaaaccatgagaataatgtggtctcagagggattctgttccaagg
aaaactggtcttggcaatgtctttgtgaagaaccttgaccctgaaatcaccagcactcac
ttgcaggacatgttcagggagttcgggactatactctcttgcaaggtagcagaacaaaat
gggaagagcaagggtttcgggtttgtccagtttaacaaagaggaatcggctgtggctgct
gtcaatgctctcaatgatacaatcattaaggggaagaagctatatgtgtcgaaattcgtt
aagaaaagtgacagaataccagcccaggatgaatccaaatttacaaatctgtttgtgaag
aatcttgctgaacatgtaactgaggatctgcttcgagagttgttctctcagtacggaagt
gtttatagtcttgccatcatgaaggatgagaaagggaagtcaaaaggttttgggtttgct
aactttgagtcgccagaagaggctaagaaggctgttgagggcatgaatggtgcactgctg
ggatcgaaacatttgtttgtaggaagggctcaaaagaaagctgagagggaaaagtttcta
aaatgtaaagaggaaatgctgaacagtgagatcaagaaacttaagtctatgaatctctat
gttaagaatctagctgaatctgttgatgatatcaaattaggagaacattgcagtgccttt
gggaagattctgtcggccaaagtgatgcgtgatggtaatgggatgagcagaggttttggg
tttgtttgcttctcaactcttcaagaagctgcaaaagctctcagcaatcttaatggagct
atgttggaaggaagaaaactttatgtggctgtagctcaaagcaaagatcatcgctgcaag
gctatgcaagattactatactcttcagctgccacaaagatctttgcaatctccaaactgg
cctgccctgcacctggtccagtatagcgtttccccaaggcctcctacggctcctctgcta
tgcccgccagtcatgtatcaaagttttggtactaatgtcgatgcggattatccttctgtt
ctaagcagacaagcacagtggggtagcagcaatggaaatgataatttccagaataagtcc
aggacatatgctaactcaagtgttcataccaactctgggaaccatggaggttatgaagct
acaggataccggaagaaggtttacagacagagtggagccactgcaggaagttcaagatca
gcaactacagatggcagagctcttcttacagaaggatcatccactggaaactccaacttg
aagacaactccaagggatcggcaccactcttttgtggagaatcttgagcctgggcgtgca
gtacagataacaggaacgtcgggaatgctgtgggagttgaacagttctgagaaagcagca
gctcaagttttgaaggtggcaaatggtaccaggaccagcgcagatcatcaccctgtgttt
gctaagtctggccgctacttgagctaa
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