Pyrus communis (pear): 137708076
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Entry
137708076 CDS
T10779
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137708076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137708076
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137708076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
137708076
NCBI-ProteinID:
XP_068303162
LinkDB
All DBs
Position
11:19525663..19531237
Genome browser
AA seq
488 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA
DNVIMEKHNIGGRMVEAKKAVPRDDQNILGRSSGSIQGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPSTVGGYGLGRYSPVAGGRSGFP
PYGSGYGIGINYEPGLSPGFGGNANFNSTMSYGRGLSPYYINVSNRFSSPIGYDGNNGGN
TSSFFSSVTQNLWGNGNGNGNGSGSGSGLNYGTNSTNGNAYIGSGSGTIGGSTFGNSGAN
WPSSAMSAQGGGNNVTNNSRNLGYGVGDNSYGLGTGGYGRNSGASVAPTTSFAASNGGGF
DGSLADFYSSNSVYGDPTWRSSNSDRDGPGPFGYGLGSAASDVSAKSSPGYVGGYSVNKR
QPNTGIAA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgacagtggtaagttgtttatcggcggcatatcttgggatacaaatgaggag
cggctgaaagagtatttcagcagcttcggggaggtggtagaagctgtgatcatgaaggat
cggaccacaggccgtgctcgtggttttggttttgtagtattttctgacccagctgtggcg
gacaatgttataatggagaagcacaatatcggtggaaggatggttgaggcaaaaaaggct
gttcccagggatgaccagaatattttgggtagaagcagtggcagcatccagggttctcca
ggtccaggtcgcacaagaaagatttttgttggaggtttagcatccactgtcacggagagt
gacttcaagaagtactttgaacagtttggaacaatcacggatgttgtggtgatgtatgat
cacaacacccagaggccgagaggctttggattcatcacttatgattcagaggaggcagtg
gacaaggttttgcttaagacatttcatgaactgaatgggaaaatggttgaggtcaagcga
gcagttccgaaggagttatcacctggtcccagtcgcagccctcttggaggatacaactat
ggtctgagtagggtcaatagcttccttaatggctacactcaggggtataatccaagtaca
gttggaggctatggacttggtagatacagtccagttgcaggtggtcgaagtggatttcct
ccatatggttctggttatggaattggtatcaattatgagccagggttgagcccaggattt
ggtggaaatgcaaactttaatagtactatgagctacgggcggggtttgagtccttattat
atcaatgtttcaaataggtttagcagccccattgggtatgatggcaataatggaggaaac
acgtcttcgtttttcagctcagtgactcagaacttgtgggggaatgggaatgggaatggg
aatgggagtgggagtgggagtggtcttaattatggaacaaactccacaaatggcaatgct
tacatcggatcaggaagtggaaccattggaggaagtacgtttggaaattctggagctaat
tggccttcttcagcaatgtcagctcaaggcggaggaaataatgttactaacaatagcagg
aatcttggttatggagtcggggataacagttatggtctgggaactggagggtatggaaga
aacagtggtgcaagtgtggcccctacaacttcatttgctgcatcaaatggtggtggtttt
gatggttccttggctgacttttacagtagtaattcagtttatggagaccctacttggaga
tcatcaaattctgatcgagatggacctggtccctttggttatgggcttggcagtgcagcc
tctgatgtttcagctaaaagttctcctggttatgttggtggttatagtgttaataagaga
cagccaaatacaggaattgctgcctag
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