Pyrus communis (pear): 137708220
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Entry
137708220 CDS
T10779
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137708220
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137708220
Surveillance factors
Other surveillance factors
137708220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
137708220
NCBI-ProteinID:
XP_068303349
LinkDB
All DBs
Position
11:complement(26568347..26575403)
Genome browser
AA seq
1496 aa
AA seq
DB search
MAHGKVSLPQDLLPSNLVDSHFSAKDEAFQGNSEEKALAGSLDMSIGDQVASDSSIPLSP
QWLYAKPDSKTLATGASGELHANDSLSHGNSTDANLRDIWRVDGSQEKKDWKRSAPDLDS
SRRWREEERETGLLGRRDRKKEDRRVGASVTRDATENRAEDRRVGATSTKDAAENKVLSS
DRWNESRRDNKWSSSWGPEDKDKDSRIEKKAEVEREDVHAEKQSFSNSNRAASERDSDSR
DKWRPRHRIEVQPAGAALYRAAPGFGMARGRVEKVGFAAGRGRSNIGCLQIGKPVLGKSG
RFADMYCYPRGKLLDIYRKQKKDSTFDVMPDGMEHVSPITQVGSIEPLAFVAPDAEEEVG
LGDILKGRITSSEVGYNSSGDKNVLNEDAKGSSNVTLSKEEGHFAANPEQNVQSAEEFIL
NNSFPVTGAEVSPISGVQTHMLKECVATEGEQKVLTVTAAADREIGPSNDDANSRSSGCQ
EQTSSSDHHYFKSNEDALLLERIVSPEDMSLCYLDPQGNIQGPFLGIDIIAWFEQGFFGI
DLPIRSFDAPNGSPFQELGEVMPHLKTKSGPVSDSSLPTQLEPLGAVGGSLDERISAPNY
DGGSAILNNQGIQNVVAEDEEIVFPGRSKGSGDCLLRSSPDIHGSFANPPSLHSPANEVS
ETNVPDQLDNKLHPFGLLMSELRGNSLLRPAQSSHSFFGMDDQVPFRDTFVGGATVANQD
SLGAMIDQPSFVETRPDNYIKNNTNVSLGSIDSPHLPHMGQASNGFDAAEHIMSQKLLKE
QLQQLNHLSTVAQSAGTGVDRFPGFGFSDSKNPNIQPSFHHPVADMEHIFEMQRQQQRQL
ELHQQQHQLELQQQQRKLERQQQQHWLELQEHQRQLELQEHQRQLEIQRQHQLELQHHRQ
LELQQQQRQLELQQQRHLQDQLHQHQMKLQQQQKSQAQHLLLEQFLHQQMSDSGYGQWKA
DATRGNPFDHLHSRKHLLDDLHQMSHSSRHDPLLEHIIQANIGRPGQTDFFDLISQAKQG
NMHTSELQPRLQQHELQAQQLSAALREQLRMEGERRIGATRFVDEASQIVRDPVGHHQAQ
MVGFSSSENYQKLPTHELQLSHLNWNHAIRERLQGGFYEPNSLEFEKSSVPASSLGMNLD
ILSARGQGLDEFYSSHPVGLEHLPFGNNGHLEDGSTEALKPHSHLHAEQTRRDSEAAMAF
SDANIWSSSDGDKEHSKQIFIDLHQKIGRQSTRLSEIDYQHHLSSSRSRGESAHHPFSLL
PDQAVMNNSFTEGPFTSNPRAFMEDLSELEGNNWKKQVVKSYEGNMVEQEETSRELHSNA
HRRQSSLSSAGGGGSFYSSETGMDKPLGEEVSNGRLPSTVTKGYDNALHRRRVLSSQDVL
SEAALSLPVKQRNPAATQVSETQASSKNDAQFRRTSSYSDASVSEASFIDMLKKPVISEA
DASNRAVALESSDGGGQAGRTGKKKGKKGRQIDPALLGFKVSSNRILMGEIHRLND
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacggaaaagtcagtctccctcaagatctcctcccctcgaatctggtcgattca
cacttctccgccaaagatgaagccttccaaggaaacagtgaggagaaggcgctagcaggg
tcccttgacatgtcaattggtgatcaagttgcctcagacagcagcatccccttgtctccc
cagtggctgtatgctaaaccagattccaagacactagcaactggagcatcaggagaattg
catgcaaatgattctctgtctcatggaaactcaactgatgccaatttgagagacatttgg
cgtgtagatggatctcaggagaaaaaagattggaagaggagtgcacctgatttagatagt
agccgccgctggcgtgaagaggagagagaaacaggcttacttggtaggagagatcgaaag
aaagaagatcgccgtgtaggtgctagtgtaacgagggatgctactgagaatagagcagaa
gatcgccgtgtaggtgcgacttcaactaaggatgctgcagaaaataaagtattgtcttct
gaccgctggaatgaatcccgaagagataacaaatggtcatcaagttgggggcctgaagat
aaggacaaggactctcgaatagagaaaaaggctgaggtcgagagggaagatgtacatgct
gagaagcagtctttttccaatagcaaccgtgcagcttctgagcgtgatagtgattctcgt
gataaatggaggccacgccatcgcatagaagttcaaccagctggggcagccctatatcgt
gctgcaccaggatttgggatggctcgagggcgtgtggaaaaagtaggatttgctgctgga
cgagggaggtctaacattggatgcctacagattggcaaacctgttcttggaaaatctggc
cgttttgctgatatgtattgctatcccagaggaaagctccttgatatttatcgcaagcaa
aagaaggattcaacttttgatgttatgcctgatgggatggagcatgtgtcaccaataacc
caagtgggctcaattgagccattggcttttgttgcacctgatgcagaggaagaggttggt
ctgggagatatattgaagggaagaattactagcagtgaagtgggatacaactcgtctggg
gacaagaatgtattaaatgaagatgctaaaggatctagcaatgtcactttaagcaaggag
gaaggacactttgcagctaacccggaacaaaatgtccaatctgctgaagagttcattttg
aacaattcttttccagttactggcgctgaggtgtcacctatttctggcgtacaaacacat
atgttaaaggaatgtgttgctactgaaggagagcagaaagttctgacggtcacagcagcg
gcagatagggagattggtcctagtaatgatgatgctaactcaagaagttcagggtgccag
gagcaaacctcaagcagtgatcatcactatttcaagagcaatgaagacgcccttctattg
gaaagaattgtctcacctgaggatatgagtttgtgctaccttgatcctcaagggaatatc
caggggcctttcctggggatcgatataattgcatggtttgagcaaggattttttggaatt
gatttgccaattcgttcatttgatgcgcccaatggatctcctttccaagaacttggtgaa
gtgatgccacatctgaaaactaaatctgggcctgtctctgactctagtttgcctactcaa
ttagagccattgggtgctgttggaggcagcttggacgagagaatatctgctcctaactat
gatggggggtctgctattctaaacaatcaaggcattcagaatgttgttgcagaagatgag
gaaattgtatttcctggaaggtctaaaggcagcggtgattgccttttaaggtcttcacct
gacattcatggctcatttgcaaatcctcccagccttcattcccctgcaaatgaagtttca
gaaactaacgtccctgatcagctggacaataagctgcatccttttggcctgttgatgtca
gagctcagaggcaactcacttttaaggcctgctcaatcatctcattcgtttttcggcatg
gatgatcaggttccttttagagataccttcgttggaggtgccactgttgctaatcaggat
tcccttggtgccatgattgatcaaccttcctttgtggagacacggccggataattatata
aaaaataacaccaatgttagtctgggttctatagattctccccatttacctcacatgggg
caagcaagcaatggctttgacgcagcagagcatataatgtcacagaagttactaaaagaa
cagcttcagcagctgaaccatctttctactgttgcacaaagtgcaggaacaggagtggac
cggttccctggatttggtttttctgacagcaagaaccctaatatccagccgtcattccat
catccagtggcagatatggaacatatttttgaaatgcagcgtcagcagcagcgtcagttg
gagcttcatcagcagcaacaccagttggagcttcagcaacagcagcgtaagttggagcgt
cagcaacagcagcattggttggagcttcaggaacaccagcgtcagttggagcttcaggaa
caccagcgtcagttggagattcagcgccagcatcagttggagctgcagcaccaccgtcaa
ttggagcttcagcagcagcagcgtcagctggagcttcagcaacagcgtcacttgcaggat
caacttcaccaacaccaaatgaaattgcagcaacaacagaaatctcaagctcaacacttg
ctccttgaacagtttttgcatcaacagatgtccgattctggttatgggcagtggaaggca
gatgctacaagaggcaaccctttcgatcatttacattcaaggaagcaccttctagatgac
ttgcaccagatgtcccattcctcgaggcatgatccattattagagcacatcatccaagca
aatataggacgcccgggacagactgatttctttgacctcatatctcaggcgaagcaaggg
aatatgcacacttcagagctgcaacctcgtcttcagcagcatgagctgcaggcacagcag
ttgtccgcagcattgagagagcaactgcggatggaaggggaaaggcgtatcggtgcgacc
cggtttgtagatgaagcaagccaaattgttagggatcctgttggtcatcaccaggctcag
atggtaggatttagttcttcagaaaattaccagaaacttcccacccatgaactgcaacta
agccatctcaactggaatcatgccatacgggagcgactgcagggagggttctacgaacct
aactctctggaatttgagaagtcatctgttcctgctagttcgcttgggatgaacttggat
attctcagtgcacgtgggcagggtctggatgagttttattcgtctcatccagttggtttg
gagcacttgccttttgggaacaatggacatctggaagatggctccactgaagcacttaaa
ccgcattcgcatcttcatgccgagcaaacccgccgagactcagaagctgccatggctttt
tctgatgcaaatatatggtcttcatctgatggtgataaagaacactcaaaacaaattttt
atagaccttcaccaaaaaattggtcgtcaatctacacggttatcagaaattgattatcag
catcacctgtcatcttctagaagccggggagaatctgcacatcatccatttagtcttctc
cctgatcaagcggttatgaacaactctttcacggaagggccctttacatctaatcccaga
gcatttatggaagatttatcagagttggagggaaataattggaagaagcaggttgtgaaa
agctatgaaggcaacatggtagaacaagaagaaacatcaagggaacttcatagtaatgcc
catagaaggcagagttcacttagcagtgctgggggaggtgggagtttttacagctctgag
acaggaatggataaaccgcttggagaagaggtttctaatgggaggctgccttctactgta
accaaagggtacgacaatgctttgcatagacgccgggttttatcttcccaggacgttttg
tctgaggcagcactttctttgcctgttaaacaaagaaatccagctgcaacccaggtctct
gaaacgcaagcatctagcaagaatgatgcgcaatttaggaggacttcgtcttacagtgac
gcttctgtgtccgaggcatcattcatagacatgcttaagaaaccagtcatttcagaggct
gatgcatccaacagagcagtggcactggagtcgtctgatggaggtggccaagcagggcgg
actggcaaaaagaaagggaagaaaggaagacagattgatcctgctctcctcggctttaag
gtttccagcaaccggatcttgatgggcgagatccatcgccttaatgattga
DBGET
integrated database retrieval system
