Pyrus communis (pear): 137708244
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Entry
137708244 CDS
T10779
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137708244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137708244
03016 Transfer RNA biogenesis [BR:
pcox03016
]
137708244
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
137708244
Messenger RNA biogenesis [BR:
pcox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
137708244
Transfer RNA biogenesis [BR:
pcox03016
]
Prokaryotic type
tRNA degradation factors
137708244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
Urease_gamma
OB_PDCD11
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
137708244
NCBI-ProteinID:
XP_068303379
LinkDB
All DBs
Position
11:25299854..25306207
Genome browser
AA seq
945 aa
AA seq
DB search
MASMANRANPLLNNLPHFLTWRALGFRTICSGRMGFSSQSERQPDPQTPVAGTKVLETFR
EEFEVGDRLITLETGKIARFANGAVVLGMEETKVLSTVAAAKGDAVRDFLPLTVDYQEKQ
FAQGVIPNTFMRREGAPKERELLCGRIIDRPIRPLFPAGFFHEVQVTASVLSSDGKQDPD
VLAANATSAALMLSDIPWGGPIGMIRIGRIAGKFIVNPTMDELSLSDLNLVYACTKDKTL
MIDVQAREISEKDLEAGLRLAHPEAVKYIEPQIKLAAKRGKHKKEYKLSMMPDRTLEKVS
QLAEAPIEAVFTDPSYGKFERGEALENITQDVRKVLEEECDEESLKLLPKAVDTVRKKVV
RKRIIAEGVRLDGRHLDEVRPLYCEAGNLPMLHGSSLFSRGDTQVLCTVTLGAPGDAQRL
DSLVGPPTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLPPEDDFPYTV
RINSEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVSEVDQSTGSIKDYRIL
TDILGLEDHLGDMDFKIAGTQNGVTAIQLDIKPAGIPLDIVCESLEPARKGRIQILDHME
REISTPRTQDDRNSPRLVTLKYSNDALRRLLGPLGALKRKIEDETGARISVSDGTLTIVA
KNQSIMEKVLEKVDFILGREIEIGGIYKGRVTSIKEYGAFVEFNGGQQGLLHISELSHAP
VSRVSDVVAVGEQLSLMCIGQDVCGNIKLSLKATSARSGSKTNNAVEESSSSTQEEPSIW
AAAGDLSSNGQEKQSSSSEELPANKCEVGGINSSASSTPILIRSAAECDEVEKAAGLVQN
SDTTKSKTSNLKTSKSFSQKGGDKEAEVGGFVTEKSLKIGTKVTAKVYQIRTGGLVLDLG
GGLRGMYRFETNGRTDFEVNDELRVECVSFSVKGIPVMSPVDDEE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatggccaaccgcgccaatccgctgctcaacaacctccctcacttcctcact
tggcgagccttagggttccgcaccatctgcagcggccgcatgggattctcgtctcagtcc
gagcggcagcccgatccccaaacccccgtcgccggtaccaaggtgctcgagactttcaga
gaagaatttgaagtcggagatcggttaattacactagaaacgggaaagatcgctcgcttc
gctaacggtgccgttgtcttgggcatggaggagaccaaagtattatccaccgtggccgcc
gccaaaggcgacgccgttcgcgattttctgcccctaactgttgattatcaagagaagcaa
tttgcccaaggagtaattccgaacacattcatgcgaagggagggtgcgccgaaagagcgt
gaactcttatgtggtcgtatcattgatcgaccaatacgtccgctatttcctgctgggttt
ttccatgaagttcaggtaacagcaagtgttctttcctctgatggaaagcaagatccagat
gtactggcagctaatgctacatctgctgcgcttatgttatcagatattccttggggtggc
cccattggcatgattcgtataggcaggattgctgggaagtttattgttaatccaactatg
gacgagcttagcttaagtgatctcaacttagtgtatgcctgtacgaaagacaaaacgtta
atgattgatgtgcaggctcgtgagatctcagaaaaagatctagaagcagggttaagatta
gctcatcccgaggcagttaaatatattgaacctcaaatcaaactggctgctaaaaggggt
aagcataagaaggaatataaattgtcaatgatgccagatagaacattggagaaagtcagt
caattggcagaagctccaatagaagctgttttcactgatccgtcatatggaaagtttgaa
cgtggagaggccttagagaatattacacaagacgtgagaaaagtacttgaagaagagtgt
gatgaggaaagcttgaaacttttaccaaaggcagtagatactgtgaggaaaaaggttgtt
cgtaaaagaattattgcagaaggagtcagacttgatgggaggcatcttgatgaagttagg
cctttgtattgtgaagctggtaatttgcctatgctgcatggatcatcccttttttctcgt
ggagacacacaggttctttgtactgtaacacttggggcgcctggtgatgctcaacgattg
gattctctggttgggcctccaacaaaacgtttcatgcttcactacagctttccccctttc
tgtattaacgaagttggtaaacgaggtggcttgaacaggcgtgaagttggtcatgggact
ctggcagaaaaagctcttcttgctgtattacctccagaagatgattttccatatactgtt
cgtatcaattctgaagtaatggcctctgacggttcaacatcaatggcaactgtctgtgga
ggcagtatggctctgatggatgctggcattccattgcgtgaacatgtagctggtgtctcg
gtgggtcttgttagcgaagttgatcaatcaactggctcaataaaggattaccgtatattg
actgatattctgggcctggaagatcatttgggggacatggactttaaaattgctggcaca
caaaatggagttacagcaattcagttggatataaaacccgctggaattcctttagatatt
gtctgtgaaagcttagaacctgcacgcaaaggtcgcattcaaattcttgaccacatggag
agagagatcagtacgccacgcactcaggatgatagaaattctcctcgattagttaccttg
aagtacagtaatgatgcacttcgtcgcttgcttgggcctctcggtgctctaaaaagaaaa
attgaagatgaaactggtgcacggatttctgtaagtgatggaacactgaccatagttgct
aagaatcaatctataatggagaaagtactagaaaaggttgattttatacttgggcgtgag
atcgaaattggtgggatctataagggaagggtaacttcaatcaaggaatatggtgcattt
gtggagtttaatggtggtcagcaaggccttctgcacatttctgagttgtcccatgcacca
gtatctcgggtttcagatgtggtagctgttggagaacagctttccttgatgtgcataggt
caggatgtttgcggtaacattaaactatcccttaaagctacttcagctcgatctggatcc
aagacaaataatgcggttgaggaatccagttcatcaacccaagaagaacctagtatttgg
gcagcagctggagacctttcgtctaatggacaagaaaagcagagctcgtcatctgaggaa
ttgccagcgaacaaatgtgaagttggcgggataaattcatctgcttcctctactccgatt
ctaattcgaagtgctgcagagtgtgacgaggtggaaaaagctgctggtttggttcaaaac
tctgatactactaagtcaaaaactagtaatttgaagacgtcaaagtctttctcacagaag
gggggagataaggaagctgaagttggaggctttgtaactgaaaaaagtctgaagatagga
acaaaagttactgccaaggtttatcagatccgtacaggagggttggtgcttgacctcggt
gggggacttcgaggaatgtatcggtttgagacaaatggtaggacggactttgaagtcaat
gacgagctgcgagttgaatgtgttagtttttcagtcaaggggattccagtaatgtctccg
gtggatgatgaagagtag
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