Pyrus communis (pear): 137708383
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Entry
137708383 CDS
T10779
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox04120
Ubiquitin mediated proteolysis
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137708383
04120 Ubiquitin mediated proteolysis
137708383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137708383
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137708383
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
U-box type E3
137708383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
137708383
NCBI-ProteinID:
XP_068303542
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All DBs
Position
11:23309245..23315201
Genome browser
AA seq
1025 aa
AA seq
DB search
MATPKPQRSLEELEDIVLRKIFLVSLIGSSDSDSRIVYLEMTAAEMLSEGKELRLTRDVM
ESVLIDRLSGSVPGAEPPFQYLIGCYKRAYDEGKKIASMKDKNLKSELESVVRQAKKLSV
SYCRIHLGNPESFPNPNFDSTKSNASPLLPLIFSEGGGSVDGFGGSGSSGGIQCPPGFLE
EFFTDSDLDSLDPILKGLYEELREIVLKVSALGNFQQPLRALYLLVKFPVGARSLVNHPW
WIPKGVYLNGRVIERTSILGPFFHVSALPDHPIFKSQPDVGQQCFSDASTRRPADLLSSF
ATIKTVMSNLYDGLTEVLLLLLKNATTRENVLEYLAEVINKNSSRAHIQVDPLSCASSGM
FVNLSAVMLRLCEPFLDANLTKRDKIDPKYVFYSNRLELRGLTALHASSEEVTEWINKAN
MGSTDGENRLLQSQEATSSGNSVNVKPSSEKAKYSFICECFFMTARVLNLGLLKAFSDFK
HLVQDISRSEDTLSTLKAMQGQTSSPQLEMDIARLEKEIESYSQEKLCYEAQILRDPTLI
QSALTFYRLMVVWLVRLVGGFKMPLPSTCPTEFASMPEHFVEDAMELLIFASRIPKALDG
VLLDDFMNFIIMFMASPEYITNPYLRAKMVEVLNCWMPRRSGSSATVTLFEGHQLSLEYL
VRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWHVPSHRNAWKQIAKEEEKGVYL
NFLNFLINDSIYLLDESLNKILELKELEAEMSNSAEWERRPAQEREERTRLFHSQENIIR
IDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKY
EFRPKQLLKQIVYIYVHLAKGDSENIFPAAISKDGRSYNEQLFSAAADVLRKIGEDGRII
REFIELGAKAKVAASEAMDTEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQR
HLLSDSSDPFNRSHLTADMLIPDNELKARIQEFIRSQESKKHAEDLSTQSTKATIQTTTS
EMLID
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgaaaccccagcggtccctggaggagctggaggacatagtcctccgcaaa
atctttcttgtatcgctgatcggttcatcggactccgattcccgaattgtttacttggag
atgactgcggcagagatgctcagcgaggggaaagagttgaggctcactcgcgacgtcatg
gaatcggttctaatcgatcggctctccggcagcgtccccggtgctgaacccccgttccag
tacctgatcgggtgctacaaacgggcctacgacgagggtaagaaaattgcttccatgaaa
gataagaacttgaagtcggaattggaatctgtggttaggcaagcgaagaagctttcggtt
tcgtattgtaggattcatttgggaaatcccgaatcgttcccgaacccgaatttcgattcg
actaagtcgaatgcgtcgcctttattgccattgattttttcagagggcggcggttcggtt
gatgggttcggaggaagtgggagtagtgggggaattcagtgcccacctgggtttttggag
gagttcttcactgactccgatttggatagcttggacccaattttgaaggggttgtacgag
gagcttagggagattgtgcttaaggtttcggccctcggaaacttccagcagccattgagg
gctctgtatttgttggttaagtttccggttggtgcaaggtcacttgtgaatcacccgtgg
tggattccgaaaggggtgtacttgaatgggcgtgtcattgagaggactagcattttgggt
cctttttttcatgtcagtgctctgcctgatcatcctattttcaagagccagcctgatgtt
gggcaacagtgcttttctgacgcttcaactcgtagacctgctgatctgctatcttcattt
gccacaattaagacagtcatgagtaacttatacgatggccttactgaagttcttctctta
ctactgaaaaatgctaccactcgtgagaatgttcttgagtatcttgcagaggtgatcaac
aaaaactcatcaagggcccatattcaggtggatcctctttcatgtgcaagttcaggcatg
tttgtcaatctcagtgctgtcatgcttcggctttgtgagccgtttttggatgcaaattta
acaaaaagggacaaaattgatccaaaatatgtattttacagtaaccgtttggagttaaga
ggtttgactgctttacatgcatcatctgaagaagtaactgaatggattaataaagctaat
atggggagtactgatggtgaaaatcgccttttacaatctcaagaagccaccagttccggt
aatagtgtcaatgtgaagccaagcagtgaaaaagctaaatattcatttatttgtgaatgc
ttcttcatgactgcaagggtgctcaatctggggttgctgaaagcattttctgactttaaa
catttagtacaggacatttcaaggtctgaagatactctttccacacttaaagccatgcaa
ggccagacatcttctccacaattggagatggatatagctcgccttgagaaggaaatagag
tcatattcgcaggaaaagctttgttacgaagctcagatattaagggatccgacacttata
cagagtgctcttactttctaccgtttgatggtggtgtggctagttcgcttggttggtgga
tttaaaatgcctctgccatcaacttgccctacggagtttgcttctatgccggagcatttt
gtggaagatgccatggagttgctcatatttgcttcccggattccaaaagccttggatggg
gttttgttggatgattttatgaacttcattataatgtttatggcaagtccagaatatatt
acgaacccttatctaagggcaaagatggttgaagtcctaaactgctggatgccccgtaga
agtggatcatctgctacagtgaccctatttgaagggcaccaactatctcttgagtatctt
gtgaggaatctcttgaagctatatgtcgacatcgagttcactggctctcacacacagttc
tatgacaagtttaatattcgtcacaacattgctgaacttcttgaatatctgtggcatgtc
cctagtcatcgaaatgcttggaaacagattgctaaggaagaggagaagggtgtttacttg
aatttcttaaactttttgatcaatgatagcatctatcttctggatgaaagtcttaacaaa
attcttgaactcaaagaactggaagctgagatgtcaaacagtgcagaatgggagcgcaga
cctgctcaagaaagggaggagagaacccgcctattccattctcaagagaatattatccga
atagatatgaaattagcaaatgaagacgttagtatgctggcatttactacagaacagatt
acagctccttttctacttcctgaaatggttgaaagggtggccagcatgctcaattacttt
ttgttgcaattagtaggccctcaaagaagatcgcttagtttgaaagaccctgagaaatat
gaattccgtccaaagcaattgcttaagcagattgtatacatatatgttcatttggcaaag
ggtgattcagaaaatatatttccagctgccatctcaaaggatggtcggtcgtacaatgaa
cagttgtttagtgctgcggcggatgtcctaaggaaaattggtgaagatgggaggatcata
cgagagtttatcgagttaggtgcgaaagcaaaggttgctgcttcggaggccatggacact
gaagctactcttggggatataccagatgaattcctcgatccaattcagtacactttaatg
aaggatccagtcatcttaccttcttcaagaatcacggtagaccggcccgtcattcaaagg
catcttcttagtgatagctctgatccgttcaaccgatcacatcttactgcggacatgctg
ataccagacaatgaattaaaggcaaggatacaggaattcattaggtcccaagaatcgaag
aagcacgcggaagacttgagcacgcagagcaccaaggcgacaatacaaactacaactagt
gaaatgctaattgattag
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