KEGG   Pyrus communis (pear): 137708906
Entry
137708906         CDS       T10779                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    137708906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcox04121]
    137708906
   03036 Chromosome and associated proteins [BR:pcox03036]
    137708906
Enzymes [BR:pcox01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137708906
Ubiquitin system [BR:pcox04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    137708906
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     137708906
    Noncanonical PRC1 (PRC1.1)
     137708906
    Noncanonical PRC1 (PRC1.3/1.5)
     137708906
    Noncanonical PRC1 (PRC1.6)
     137708906
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 TPR_TTI1_C zf-rbx1 zf-RING_6 zf-Nse zf-RING_10 Cloacin
Other DBs
NCBI-GeneID: 137708906
NCBI-ProteinID: XP_068304169
LinkDB
Position
11:4317125..4322146
AA seq 485 aa
MPSQKRSSAEQLSDDVEHRHHQRQRPKQSRLQDEHQLLDQEEEEEEDDEVEEEEEEEDDE
DDADSDGGASSTSQEIPEYSLYLLYSLSLIFIQLQELRKDVHCPICLGIMKKTRTVMGCL
HRFCRECIDKSMRLGNNECPACRAHCASRRSLRDDPKCDALIAALYPDIEKYEEEELSFH
QEERTRNEQIQASIAKVFEQQSEALTKRRTSGKDISDSFPMRPRPNDRSSVLRKRNSRAT
GDDNNNDNNTKGNNSSSTDDRRTELRPRQRRRRAGFGSSQPLASLANSSGGCTENDVEGK
QENRGISPGVVWSSEMLVWGRGSARSHTRRGIASGCNSKNSESTRISKLVDHLQSLEENN
DELDVHLMLISLDTSCTPSLQRPHLSCRPSLSVKHLCEYVSHQTPLRAEEVELLAVKGPS
SSNDKKLNLNLAPLIDDPDSVPFLTDPCRYELQILQEEETLGRIRANCTSSRDHLILAYR
RKEIS
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgccttcacagaagcgttcgtcagcagagcagctcagcgatgatgtagaacatcgccac
caccaacggcaacgacccaagcaatctcgactgcaagatgaacaccaactcctagaccaa
gaagaggaagaagaggaagatgacgaagtagaagaagaagaagaagaagaagatgacgaa
gatgatgccgattctgatggaggcgcatcttcaacttctcaagagattcccgagtactct
ctctatctactttattctctgtcattgatattcatacaactgcaagaactccgtaaagac
gtacactgtccaatatgtctcggaattatgaagaaaacacgtactgtaatgggatgccta
cacaggttttgcagggaatgtatcgacaagtcaatgcgattggggaacaacgagtgtcct
gcttgtcgcgcacactgtgcaagtcggcgttcattgagagacgatccaaagtgtgatgcc
ctaatagcagctttatatccggatattgagaagtatgaggaggaggaattgtctttccat
caggaggagaggactcgaaacgagcagatccaagcatcaattgccaaagtttttgaacaa
caatcagaagctctaactaagagacgcacatctggaaaagatatatcagattcatttcct
atgagaccacggcccaatgatcggagttctgttttgaggaaacggaactctcgagccact
ggggatgataataacaatgacaataataccaagggcaacaattcatcttccactgatgac
cggcgtactgaacttaggccaagacagcggagaagacgggcaggatttggatcctctcag
cctcttgcgtctctggccaattcaagtggaggatgcactgaaaatgatgtagaagggaaa
caagagaaccgcggaatttcacctggtgttgtctggagctctgaaatgcttgtttggggg
cggggtagtgctcgaagtcacacacggcgtggcattgctagtggttgcaacagtaagaat
tctgagagtactcgcatatcaaagttggttgatcatctccagagcttagaggaaaacaat
gatgagttagatgttcatctcatgcttatttctttggatacaagttgtacaccaagttta
cagcgcccacacctttcctgtcggccgagtttgtcagtgaagcacctgtgtgaatatgtg
tctcaccagacgcctttgagggctgaggaagttgaattattggcagttaaagggccttcc
agttccaatgacaagaaattgaacctaaacctggcgcccttaattgatgatccggattct
gtgccatttctaacagatccatgtagatatgaactgcaaattctgcaagaagaagaaact
ttgggaaggatcagagccaattgcacttccagcagggaccatttgattctcgcatacagg
cgaaaggagattagttag

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