Pyrus communis (pear): 137709666
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Entry
137709666 CDS
T10779
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pcox Pyrus communis (pear)
Pathway
pcox04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
137709666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcox04040
]
137709666
Ion channels [BR:
pcox04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
137709666
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
137709666
NCBI-ProteinID:
XP_068304754
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Position
12:25906218..25915094
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AA seq
798 aa
AA seq
DB search
MAAGYNGTEVPILPNTLPQYSEDNDQLLFDTFVSQKRKASVSIPMSSMGSGTSYEREHRL
EGHTGPLGSQSKPLFGPVSGPLYANDRPDSIFRAAQALTAGQEVVEPAGENFPSTNATNQ
NEWTDENYAGKNEHLLRFGRLGLCNDPYCTTCPTYNPKAAHRRTSEIIDSKFYSALYGDA
KGSARSFFSFLSPYIPGVMNPHAKVVQQWDKFFVISCIISIFVDPLFFFLLLVDQDKNCI
VLDWPLTTRLVIFRSITDFIYLMHILLQFRLAYVGPESRGVGAGDLVDHPKKIALNYLQG
YFLLDFFAVLPLPQIIILLVLPDNLGLRAANYAKNLLRASVLVQYIPRLFRFLPLLAGQT
PSGFIFESAGANFVINILIFVLASHVIGSCWYLMGLQRVNQCFRDACGISGINGCLSFID
CGRGNEFGDSGVDNPSRDSWINNANASACLTSSGYTYGVYNQTAALTTQKSIVTRYVYGL
FWGFQTLGTVAGNLVPSYFGWEVLFLIGCIALGVLVFALIVGNMQNLVQALDRRRLEISF
RRHDVEQWMRNRRLPEELRRRVREAERYTYAATRGVNEEVLVGILPENIQIDIRRHLFKF
IKKVRIFALMDEPILDSICGRLRQTTYMKGSKVLYRGGLIEKMVFIVRGKMESMGEDGIR
IPLSEGDVCGEELLTWCLEHSSVNKDAKRIRIPGQRLLSNRIVRCLTNVEAFSLRAADIQ
EVTSVFSRFLRNPRVQGAIRYESPYWRGLAARYIQVAWRYRKKCLQQADSSQSQSHSQSQ
SQSRSQSQSRSQFNHALL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggttataatggaactgaggtacccatcctaccaaacactcttccgcaatac
tcagaagataatgaccagctactgttcgacacatttgtgtcccaaaagcgaaaggcatca
gtttccattcccatgagttctatgggctcgggcacgtcatatgaaagggaacatagactt
gaaggtcatactggtccattagggagccaaagcaaacctcttttcggacctgtgagtggt
ccattatatgctaacgacaggcctgatagcattttccgggcagctcaagctctaacagca
gggcaagaagtggtggaacctgcaggagaaaattttccttctaccaatgcaacaaatcag
aacgaatggacggatgaaaactatgcgggtaaaaatgaacacttgctgagatttggccgg
ctggggctgtgcaatgatccttactgcacaacttgcccaacatacaatcccaaggctgct
catcgaaggacttcagagataattgattccaagttttatagtgctctgtatggggatgcc
aaaggcagtgcaaggagtttcttttcttttctgagtccatatatacctggagttatgaac
cctcatgctaaagttgtgcagcaatgggacaagtttttcgtcatttcttgcataatatca
atttttgtagacccactgtttttcttcctcctgctcgttgaccaggataagaactgtata
gttcttgattggcctttgacgacaagacttgtgattttcagaagcattactgatttcata
tacctaatgcacatactccttcagtttagattggcttatgtgggtcctgagtctaggggg
gttggtgctggcgatttagttgaccatccgaagaaaatcgctctgaattaccttcaagga
tattttctactagactttttcgctgtattaccgctgcctcagatcataatactgttagtt
ctaccagacaacttgggattaagagcagcaaattatgcaaaaaatcttttacgtgcttca
gttcttgttcagtatattcccaggttatttaggtttctgcctctgctcgctggtcagact
ccaagtggcttcatatttgagtcagcaggggcaaattttgtaataaatattctcattttt
gtgttggctagccacgttattggatcgtgctggtacctcatggggctacagagggttaat
caatgttttcgagatgcctgcggtatatctggaattaatgggtgtctaagcttcatagat
tgtgggcgtggaaatgaatttggagattctggagtggataatccatcacgtgatagctgg
ataaacaatgcgaatgctagtgcgtgcttaacttcaagtggctatacctacggagtttac
aaccaaaccgccgctcttacgacacaaaagagtatagtcactagatatgtgtacggattg
ttttggggattccagacactcggtaccgtggctggaaatctagttccgagctattttggt
tgggaagtcctttttttaattggctgcattgccctaggtgtcttggttttcgctcttata
gttggaaatatgcagaacttggtgcaggctcttgaccggagacggttagaaatttccttc
agacgtcatgatgttgagcagtggatgaggaatagacgcttgccagaggaacttagaagg
cgggtgcgagaagctgagcggtacacttatgcagcaaccagaggagtaaatgaagaagtg
cttgtgggaatcctgcctgaaaacattcagatagatataagacgtcatctcttcaagttt
attaagaaagtacgaatttttgccctgatggatgaacccatcttagattccatttgtgga
agactaaggcaaacgacatacatgaagggaagtaaagttttgtaccgtggtggtctcatc
gagaagatggtttttatagtgaggggaaaaatggagagcatgggagaagatgggattaga
attccgttatctgaaggagatgtttgtggtgaggaacttctcacatggtgtcttgagcat
tcttcggtaaacaaagatgctaaaaggatcaggattcctggacagcggttgcttagcaac
aggattgtaagatgcttaacaaacgttgaagcattttcactccgagcagctgacattcaa
gaagtcaccagtgttttctccagattcttgcgcaacccgcgtgttcaaggagccataagg
tatgagtcaccttactggagaggccttgcagcaagatacattcaagtagcatggagatac
aggaaaaaatgcctgcagcaagcagactcctctcagtctcaatctcactctcaatctcaa
tctcaatcccgatctcaatctcaatcccgatcccaattcaatcatgcactgttataa
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