Pyrus communis (pear): 137709753
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Entry
137709753 CDS
T10779
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137709753
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137709753
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
137709753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_30
AAA_22
DEXQc_Suv3
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
137709753
NCBI-ProteinID:
XP_068304831
LinkDB
All DBs
Position
12:complement(23732162..23749415)
Genome browser
AA seq
2087 aa
AA seq
DB search
MLVQLPRLTSSLREPFDVDQAYLQRKILLQSCHKPPQSSSSVDESELARKIVHRWEEASV
EVRQAYKQFVGAVVELIDGEVSSEEFREVALAMYRLFSSPAEEANVETIIARRRLEVQNL
LGQAVSDANMRKVVSLAQRLCGVQSSDGGTSLPENPVSGTDDNAEFGADLVFHAPARFLV
DVSLEDGELLGEESTSSTSYYEGLYSRNDLNDRQPTSNGQSFNLSWLQDACDRIITKSTS
QLSGDELAMAICRVLDSDKSGDEIAGDLLDLVGDSAFETVQDLISHRKELVDAIHQGLLG
LKSDKLSSSSQPRMPSYGTQVTVQTESERQIDKLRRKEEKRQRRGTEYGADSDLAGVKFS
SLVQASERKKPVDDLLGYGEAHSLAVSALPQGTVRKHHKGYEEVIIPPTPTAQMKPGEKL
IEITELDEFAQAAFRGYKSLNRIQSRIFHTVYNTNENILVCAPTGAGKTNIAMISILHEI
GQHFKDGYLHKNEFKIVYVAPMKALASEVTSTFSHRLSPLNMTVKELTGDMQLSKNELEE
TQMIVTTPEKWDVITRKSSDMALSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVEST
QTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDASYRPVPLAQQYIGISEQNFAARNE
LMNEICYKKVVESLRQGYQAMVFVHSRKDTAKTAQKLVELARKFEGLDLFKNDEHPQFSL
VQRDVKKSRNKDLVALFEFGVGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNL
PAHTVVIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLR
LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLVYGIGWD
EVVADPSLSLKQRSLIADAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY
NECLRRHMNETEVIDMVAHSSEFENIVVRDEEQHELEALVRSSCPLEVKGGPSNKHGKIS
ILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRKGWSEMSLFMLDYCKAVDH
QVWPHQHPLRQFDKDLSGDILRKLEEREADLDRLYEMEEKDIGALIRYGPGGRLVKQYLG
YFPWIQLSATVSPITRTVLKVDLLITPDFIWKDRFHGTAQRWWILVEDSENDHIYHSELF
TLTKRMAKGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLRSEAFYTISFQNLALPEAHTSH
TELLDLKPLPVTSLGNNSYEALYRFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISA
ELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWKGRLVSQLGKEMVEMTGDYTPDMMAIM
SADIIISTPEKWDGISRNWHSRDYVKKVGLMIMDEIHLLGADRGPILEVIVSRMRYISSQ
TEREVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSMPEDDLQMV
LSQVTDNNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHL
VIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYE
PFPVESSLREQLHNHINAEIVSGTICHKEDALHYLTWTYLYRRLMFNPAYYGLDNAEAEV
VNSYLSRLVQNTFEDLEDSGCVEMNDDSVKPTMLGSIASQYYLSYMTVSMFGSNISSDTS
LEVFLHILSAASEYNELPVRHNEENYNGALAERVRYKVDKDRLDDPHVKANLLFQAHFSQ
LELPISDYVTDLKSVLDQSIRVIQAMIDICANSGWLSSSVTCMHLLQMVMQGLWFDKDSS
LWMMPCMNVELADSLSKRGIFSVQQLLNLPKTTLQTMIGNFPASKFYQDLQHFPHIEMKL
RIQEKDSGKSHSLNIRLVKTNYRQNKSRAFTPRFPKVKNEAWWLVLGNTSTSELYALKRV
SFSDHLVTHMELPAAPNNIQGMKLILVSDCYLGFEQEHSISELIQRR
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcaacttccgcggctgaccagctctctcagagagccctttgacgtcgatcag
gcctatttgcagcggaagatcctcctccagagctgccacaaaccgccccagtcttcgagc
tcagttgatgagtcggaacttgctaggaagatagttcatagatgggaagaagcttcagtt
gaagtgcggcaagcgtacaagcagtttgtcggagcagtggttgaattgatagatggagaa
gtttcctccgaagagtttcgtgaggtggcattggctatgtaccgccttttcagctcgcca
gcggaggaagccaatgttgaaacaattattgccaggagaaggctggaagtgcaaaactta
cttggtcaagccgtttcggatgctaacatgcggaaggttgtctcccttgcccagagactt
tgtggggtgcagtctagtgatggggggacttcgcttccagaaaaccctgtaagtgggact
gatgacaatgcagaatttggcgctgaccttgttttccatgcaccagctcggtttctggtg
gatgtttctttggaggatggggagctattgggtgaggaaagcacttcttctacatcatat
tatgaaggattatatagtcgcaatgacttgaatgatcgtcaacctacttccaatggacaa
agcttcaacttgagttggttacaagatgcatgtgatcggataataacaaaaagtacttca
cagctttctggagatgaattggctatggccatctgtcgggttcttgactctgacaaatct
ggtgatgagatagcaggtgacttgttagatcttgttggggatagtgcgtttgaaactgtc
caagacctcatatcacatcgaaaggaacttgtcgatgccatccatcaagggctactggga
ctgaaatctgataaattatcttcaagctctcaaccacgtatgcctagttatggcacacag
gttactgttcaaacagaatctgaacggcaaattgataaacttcggcgcaaagaggaaaag
cgacaaagacgaggaacagaatatggtgctgatagtgatctggctggtgtaaaattttct
tctctagtacaagcaagtgaaagaaaaaaacctgttgatgatctcttagggtatggtgaa
gctcactctttagcagttagtgctcttcctcaaggaactgtgaggaagcatcataagggg
tatgaggaagtcattattcccccaacaccaacagcacaaatgaaaccaggagaaaagctg
attgagataacagagttagatgaatttgctcaagctgcttttcggggatacaaatctttg
aaccgtattcagagccgcatatttcatactgtttataacactaatgaaaatatactagtt
tgtgctccaacaggagctggtaagacgaacatagctatgatttctattctacatgagatt
ggacagcacttcaaagatggttacttgcataaaaatgaatttaaaatagtttatgttgca
cctatgaaggcattagcttcagaagtcacatcaacttttagccatcgcttatctccattg
aatatgactgtgaaagagcttactggcgacatgcaactatctaagaatgaacttgaagaa
actcagatgatagttactacacctgaaaaatgggatgtcattactcgcaagagcagtgac
atggcactttcaatgctcgtgaagcttttaattattgatgaagtgcatctattgaatgat
gacaggggccctgtaattgaggcactagttgctcggactttgcgccaggtggaatctaca
cagacgatgatacgcattgttggcctttcagccaccctacccaactatttggaggttgca
cagtttctgagagtcaatccagatgcaggactcttcttttttgatgctagttatcgtcct
gtgccccttgcacagcagtatattggtattagcgagcagaactttgcagcccgaaatgaa
ttaatgaatgagatatgctacaagaaggttgttgaatcactcagacaagggtatcaggca
atggtatttgttcattctcgaaaggacacagcaaaaacagctcaaaaattggttgaactt
gctcgcaagtttgaaggactggatcttttcaagaacgatgaacacccacagttttcattg
gttcagagggatgttaagaagtccagaaacaaagatcttgttgcactttttgaatttgga
gttggagttcatcatgctgggatgttacggtctgatagaggtttgactgagcgccttttc
tctgatggactattgaaggtacttgtttgtacagcaactttggcatggggtgtaaatcta
ccagctcacactgttgtgataaaggggactcaattgtatgatccaaaggctggtgggtgg
aaagacctgggcatgctagatgttatgcagatctttgggcgtgctgggagacctcaattc
gacaaaagtggtgagggcattataattacgtctcacgacaaactggcctactatcttcgg
ttgctgacaagtcaacttcctatagaaagtcagtttattagttccttgaaagacaattta
aatgcagaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatggcttgga
tatacatacctttttataagaatgaggctgaaccctttggtgtacggtattgggtgggat
gaggttgttgcagatccttccttgagcttgaagcaaagatctcttattgcggatgctgca
cgttccctggacaaagcaaaaatgatgcgatttgatgaaaaaagtggcaacttttattgt
acagaacttggtcgaattgcaagccacttttatattcaatactcaagtgttgaaacgtac
aatgaatgtttgagacgccacatgaatgagactgaggtaattgatatggtagcccactcc
tcagaatttgaaaatattgttgttcgagatgaggaacagcatgaacttgaggcgttggtg
cgatcatcatgccctttagaagttaaggggggtccttcaaataaacatggaaagatttcc
attctcattcagttgtacatatctcgtggctcaatcgataccttttccttggtttctgat
gctgcatatataagtgcaagcttggcacgcattatgcgggctttatttgagatttgctta
cgaaagggctggtctgagatgtcattgttcatgttggactattgtaaggctgtggatcac
caagtttggccccatcagcatcctctcagacaatttgacaaggatctttcaggagatata
ctgcgaaagcttgaagaacgagaggctgacttagatcgcctatatgagatggaagaaaaa
gacattggagcattgattcgctatgggcctggaggaaggttggtcaagcaatatttggga
tattttccatggatccagttgtcagcaactgtgagtccaatcaccagaactgttttaaag
gtggacttacttattacaccagacttcatatggaaagatcgttttcatggcacagcccaa
cgttggtggattctcgttgaggattcggagaatgaccacatctaccattcagagctattc
actctgacaaagcggatggctaagggggaacctcaaaagctttcttttactgtgccaata
tttgagccacatccaccacagtattatatccgtgctgtttcggattcttggttgcgttca
gaggctttctacaccatatctttccagaatctagcactgccagaggctcatacttcacat
acagaactgctagatttgaaacctctccctgtgacttcacttggcaacaattcatacgaa
gcattgtacagattctcacactttaatccaatacaaacacagactttccatgtcttgtat
cacacagacaataatgttttgttaggagctcccactggaagtgggaaaactatatctgcc
gagcttgctatgcttcgtctcttcaatacccagcctgatatgaaggtcatttacatagca
cctttgaaggctattgttcgggaaagaatgaatgattggaaaggacgcctcgtctctcag
ctagggaaagagatggttgaaatgactggtgattatactccagatatgatggccattatg
tcagcggatatcataatatctactcctgagaagtgggatggtatcagtcgtaattggcat
agtcgagactatgttaagaaggttgggcttatgatcatggatgagattcacttgttggga
gctgaccgtggacccatccttgaggttattgtgtcaaggatgagatacatatcatcacag
acagagcgtgaagtacgatttgtaggcctttctacagctttagcaaatgcaggggatttg
gctgattggttgggtgttggggaaatcgggctcttcaattttaaaccaagcgtgagacct
gtacctcttgaagttcatatccagggataccctggaaagttctattgcccaaggatgaat
agcatgaacaaaccagcatatgctgcgatatgcacccactcacctacaaaaccagtttta
atatttgtttcctctcgtcgacagacaaggcttactgcattggacctcattcagtttgca
gcttcagatgaacatccaaggcagtttcttagcatgccagaagacgacctgcagatggtg
ctttctcaggtcactgataataaccttaggcacaccttgcaatttggcattggattacat
cacgctggtctgaatgacaaggatagatctctagttgaagagctttttgcaaacaacaag
attcaggtattggtttgtacaagcacattggcatggggtgtaaaccttccagctcatcta
gtcatcattaagggaacagaatattatgatgggaaagcaaaaagatatgttgattttcca
atcacagatatcttgcaaatgatgggtcgtgctggccggccacaatttgatcagcatggg
aaagcagtcattcttgttcatgaacccaaaaagagcttctataaaaagttcttatatgaa
ccatttcccgtcgagagtagtctgagggaacagttgcataatcacatcaacgctgagata
gtttctggcacaatttgccataaagaggatgcgctgcattatcttacctggacatattta
taccgtagactgatgtttaatccagcttactatggcttggacaatgcagaagctgaagtt
gtaaattcttacttgtctaggctagtgcagaacacatttgaggatctcgaagacagtgga
tgcgtcgagatgaatgatgacagtgtgaagccaacgatgctgggttcaatagcatcccag
tattaccttagctacatgactgtatcaatgtttggttcaaacataagttcagatacgtcg
cttgaagtgttcttgcatatcctatcggctgcttctgaatataacgaacttcctgtgcgg
cacaatgaggagaattacaatggagcgttggctgagagagttcgatataaagtggataag
gaccggttagatgatccacatgtcaaagccaatcttctgtttcaggcacatttctcgcag
ttagaattaccaatcagtgattacgtcacagacttgaagtcggtactggatcaaagtata
cgggtcatccaggccatgatagatatatgtgccaacagtgggtggctttcaagctcagtt
acttgcatgcatcttctgcaaatggtcatgcagggtttatggtttgataaggattcttcc
ttgtggatgatgccatgcatgaatgttgaacttgccgactcactaagcaaaagaggaata
ttcagcgtgcagcaactactgaatctccccaagacaactttgcagaccatgatcggaaac
ttcccggcttcaaagttttatcaggatctgcagcattttccccacatcgaaatgaagtta
agaattcaggaaaaggacagcggaaagtctcactctttaaacatcagattggttaagacc
aattacaggcaaaacaaatcaagagcgtttaccccgcgatttcccaaggtgaaaaacgaa
gcgtggtggttggtccttgggaacacctcaacatctgaattatacgctctgaagagagta
tccttctccgatcacttggttactcacatggagttaccagcagctccgaataacatccag
gggatgaaattgattttagtttcggattgttatttgggcttcgagcaagagcactctatc
tcagaacttattcaacggcggtga
DBGET
integrated database retrieval system
